Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02654 ATGCCTCACAGAACCACATACATTTTCCCGCGTCAATTTCCGGAGCGAGGGTTGGATGAATCTTCCAAACAGCTGTTAGATCACGAGAAAAAGAAAATCGTCAACTCAATCAAACATGACACGTTTAGCGTCGAAAGCGGCACTCCGAACAAACCGCTTCCGACTAAAGAAAACGACGTCGTTCTCTCCTCCGCTAAGCACTCCGCAGTCTCCGACCTGTTCGCCGCCGGCGAGAAGTTCCGGACTAAACAAAAGCAAATCGCCGCGTTCTGCGATTGGCTGATCGACAAGAAAGTCAGCCACTCCGGCCACCACCAAGACCACCATTGTGAAGGCGACCTACTTCTGCCGCGGGAAACTACCATCAAGGACGCTTCCATTGACCAGAGCTTTGACCGGCAGGTTTCGCTGCCGAGGCTATCGAGCGGGAGCAGCTATGCTGGAAGCTTGTTTTCGGGGACGACGTTTGATTGCAATTTTTCCAGCGATATTAAGGAGGAAACGTCGTCATCTCGCACTCTCACTACTATTGCTGCGCCGAGGCACAAGGATAAGGAGGTCGAGGAAGAGAGCACGGAGAAGTTGGCGAAGAAGTCGAAAGAGAGCTATATCTTGCAACTCACGTTAGCGAAGAGGCTCAACTTTTTGGCTAGCCTCGTCACTGAACCTTTTCTCACTCCAGGAACCGAAACCTGGGATGCTGAATCCGTTTCTTACCGCCTATGGGTGAGTGGATGTTTATCTTACACGGACAAGATATCTGACGGGTTTTATAACATACTGGGGATGAATCCATATCTTTGGGTGATGTGTAATGATGTGGAGGAAGGTAGAAGGATTCCTACTTTGATGGCGCTAAAAGCGGTTGAGCCCAGCGAAACTTGTATGGAGGTGGTGCTTGTTGATAGACGCGAGGACTCTCGGTTGAAGCTGCTTCAAGATAAGGCGCAAGAGTTGTATTGTGCTTCTGAGAACACCTTGGTGCTAGTGGAGCAGCTAGGGAAACTGGTAGCTATTTATATGGGGGGTATGTTCCCGGTGGAGCAAGGCAATCTTCACAAGCGCTGGAAGTTGGTTAGTAAGAAGTTGAGGACTTTGCACAAGTGTGTTGTGCTTCCCATTGGCAGCCTGTCTACTGGGCTTTGTAGGCATCGGGCAATACTTTTTAAGAGATTGGCAGATTACATAGGTTTGCCCTGTCGTATAGCTCGTGGTTGCAAGTATTGTGTTGCAGATCATAGATCCTCTTGCCTAGTCAAAATTAAAGATGACAAACAGCTCTCAAGGGAATATGTGGTTGACCTAGTTGGGGAACCAGGAAATGTCCATGGACCAGATTCCTCAATAAATGGAGCATATGTTTCTTCAATGCCTTCCCCGTTTCAAATTTGTCACTTAAAAGAATCACAATCACCTTATATGGATGACATGGCAAGTTCTGAATCCGTAGGTTCCAATGACAGACCTGTTAATCCTGAAAATCTTCCGTATTCAGGCTGCGGAAATAATGATCAACAAGCTAAAGAAACTGATTTGCTGAGAAGCTCCATTTATAGTTCAGTTGATCAGATCTGTGAAGTTACAGAACCATCTCTAATTCCTTTTGGATTAGATGGGAATGACGAGGAATGCTCAGTTATTAGTTCGGTTTTGCCTACCATCCATGAAGATGATTCTAAAATTCTCCATCCAGACATCGAGGCAACACTAAATGAATATCCAAGCCTTAGGGAAGATGTAGTACAATTACAAGAAATTTCCAACAATGAGATCATTGTAAATGGAAGTTCTGCGGTGAAAAGTAGTTTCAAGCGATCTATACTTGGTTCATCCAGCCAGTCAGAACTGAAACAGGTAGACAATAGAAGTGAAAACAAGGGTTGTTTACCTGCTGGGAATATTCCAAGATATGTGAATCTTGAGCCATCACTTGCAATGGACTGGCTTGAGATATCATGGGAGGATTTACGAATTAAAGAGCGTGTTGGTGCTGGTTCATTCGGGACAGTGTACCGTGCTGAATGGCATGGATCGGATGTTGCAGTCAAGGTTTTAACAGTTCAGGATTTCCATGATGATCAGTTGAAGGAGTTCCTGAGAGAGGTTGCAATAATGAAACGGGTTCGCCATCCGAATGTGGTGCTCTTCATGGGATCTGTTACAAAACGCCCCCATCTATCAATAGTGACAGAGTATTTGCCTAGGGGTAGTTTATACCGCCTGATACACAGACCAGCATCTGGTGAAATTCTGGACAAGAGGAAGAGACTGCGGATGGCATTGGATGTGGCTAAAGGAATCAATTATCTCCACTGTCTGAAACCTCCAATTGTGCACTGGGATCTCAAATCCCCAAACTTGTTAGTGGATAAAAATTGGACTGTGAAGGTTTGTGATTTTGGATTGTCCAGATTTAAGGCAAACACTTTCATACCGTCCAAATCAGTTGCTGGAACACCTGAGTGGATGGCTCCAGAATTTCTTCGTGGAGAACCTTCCAATGAGAAATCTGACGTATACAGTTTTGGAGTTATCCTGTGGGAACTTGTGACCTTGAAACAGCCATGGAGTGGACTTAGCCCTGCCCAGGTGGTTGGAGCTGTTGCTTTCCAGAATAGGAGGCTTGCTATCCCTCCAAACATCTCCCCAGCATTGGCCTCCCTCATGGAATCTTGTTGGGCCGATGACCCTGGTGAGCGGCCATCTTTTGGTAGCATAGTTGAATCACTAAAAAAGCTGATAAAATCTCCAGCAGATCTGATAAAGATGGGAGATACATAG 2781 0.4577 MPHRTTYIFPRQFPERGLDESSKQLLDHEKKKIVNSIKHDTFSVESGTPNKPLPTKENDVVLSSAKHSAVSDLFAAGEKFRTKQKQIAAFCDWLIDKKVSHSGHHQDHHCEGDLLLPRETTIKDASIDQSFDRQVSLPRLSSGSSYAGSLFSGTTFDCNFSSDIKEETSSSRTLTTIAAPRHKDKEVEEESTEKLAKKSKESYILQLTLAKRLNFLASLVTEPFLTPGTETWDAESVSYRLWVSGCLSYTDKISDGFYNILGMNPYLWVMCNDVEEGRRIPTLMALKAVEPSETCMEVVLVDRREDSRLKLLQDKAQELYCASENTLVLVEQLGKLVAIYMGGMFPVEQGNLHKRWKLVSKKLRTLHKCVVLPIGSLSTGLCRHRAILFKRLADYIGLPCRIARGCKYCVADHRSSCLVKIKDDKQLSREYVVDLVGEPGNVHGPDSSINGAYVSSMPSPFQICHLKESQSPYMDDMASSESVGSNDRPVNPENLPYSGCGNNDQQAKETDLLRSSIYSSVDQICEVTEPSLIPFGLDGNDEECSVISSVLPTIHEDDSKILHPDIEATLNEYPSLREDVVQLQEISNNEIIVNGSSAVKSSFKRSILGSSSQSELKQVDNRSENKGCLPAGNIPRYVNLEPSLAMDWLEISWEDLRIKERVGAGSFGTVYRAEWHGSDVAVKVLTVQDFHDDQLKEFLREVAIMKRVRHPNVVLFMGSVTKRPHLSIVTEYLPRGSLYRLIHRPASGEILDKRKRLRMALDVAKGINYLHCLKPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFIPSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTLKQPWSGLSPAQVVGAVAFQNRRLAIPPNISPALASLMESCWADDPGERPSFGSIVESLKKLIKSPADLIKMGDT 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02654 926 Pfam Ethylene-responsive protein kinase Le-CTR1 234 442 - -
Viun9g02654 926 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 223 913 - -
Viun9g02654 926 FunFam Serine/threonine-protein kinase isoform 1 646 734 - -
Viun9g02654 926 ProSitePatterns Serine/Threonine protein kinases active-site signature. 777 789 IPR008271 GO:0004672|GO:0006468
Viun9g02654 926 Gene3D Phosphorylase Kinase; domain 1 649 733 - -
Viun9g02654 926 ProSitePatterns Protein kinases ATP-binding region signature. 662 683 IPR017441 GO:0005524
Viun9g02654 926 Gene3D Transferase(Phosphotransferase) domain 1 735 921 - -
Viun9g02654 926 CDD STKc_MAP3K-like 662 910 - -
Viun9g02654 926 MobiDBLite consensus disorder prediction 475 505 - -
Viun9g02654 926 Pfam Protein tyrosine and serine/threonine kinase 656 910 IPR001245 GO:0004672|GO:0006468
Viun9g02654 926 SMART serkin_6 656 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02654 926 SUPERFAMILY Protein kinase-like (PK-like) 634 909 IPR011009 -
Viun9g02654 926 ProSiteProfiles Protein kinase domain profile. 656 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02654 926 PRINTS Tyrosine kinase catalytic domain signature 881 903 IPR001245 GO:0004672|GO:0006468
Viun9g02654 926 PRINTS Tyrosine kinase catalytic domain signature 771 789 IPR001245 GO:0004672|GO:0006468
Viun9g02654 926 PRINTS Tyrosine kinase catalytic domain signature 837 859 IPR001245 GO:0004672|GO:0006468
Viun9g02654 926 PRINTS Tyrosine kinase catalytic domain signature 730 743 IPR001245 GO:0004672|GO:0006468
Viun9g02654 926 FunFam Serine/threonine-protein kinase CTR1 735 920 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02654 Viun-Chr9 35475366 35482701 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02654 1 924 MAP Kinase Kinase Kinase AT4G24480 56.602 0.0 1058
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Viun9g02654 PK_Tyr_Ser-Thr 6.7e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02654 - - gmx:100808435 1625.53