Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02594 ATGGCGGCCGCTCCTACGCCTCGCGAAGAGAACGTGTACATGGCGAAGCTCGCTGAGCAGGCCGAGCGCTACGAAGAGATGGTGGAGTTCATGGAGAAGGTGTCCGCTGCCGCGGACAACGAGGAACTCTCCGTCGAGGAGAGGAATCTCCTCTCCGTAGCCTACAAGAACGTCATCGGAGCGCGCCGTGCCTCGTGGCGCATCATCTCCTCGATCGAGCAGAAGGAAGAGAGCCGCGGCAACGAGGACCATGTCTCCGTCATCCGCGACTACCGATCCAAGATCGAGTCCGAGCTCTCCAACATCTGCGACGGTATTCTCAAACTCCTCGACTCTCGCCTTATTCCCTCTGCTTCCTCCGGCGATTCCAAGGTCTTCTACCTCAAGATGAAGGGCGATTACCACAGGTACCTCGCCGAGTTCAAGACCGGCGCTGAGCGCAAGGAGGCTGCCGAGAGCACTCTCGCTGCATACAAATCCGCTCAGGACATTGCAAATGCCGAACTGCCTCCAACTCATCCAATTAGGCTCGGCCTTGCTCTGAACTTCTCCGTGTTTTACTATGAAATCCTTAACTCTCCTGATCGTGCCTGCAACCTTGCAAAACAGGCTTTTGATGAAGCGATTGCTGAATTGGATACATTGGGAGAGGAGTCATACAAGGATAGCACTTTGATCATGCAACTGCTTCGTGATAACCTCACCCTTTGGACCTCGGACATGCAGGATGACGGAGCAGATGAAATTAAAGAAGCAGCACCGAAACAGGATGATCAGGAGGTGTTTGTTGCTTATATCTTTGGTGCTGGAATTTTAGGCATTCATGTCTGTTATGAATTGTGGATGTACTGGGCCGTTTTAGTTTGTCCTTCCATTTTCAAGTGTTTTCCAAATTGCCTATTTTATTAA 909 0.5171 MAAAPTPREENVYMAKLAEQAERYEEMVEFMEKVSAAADNEELSVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSVIRDYRSKIESELSNICDGILKLLDSRLIPSASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLAAYKSAQDIANAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAPKQDDQEVFVAYIFGAGILGIHVCYELWMYWAVLVCPSIFKCFPNCLFY 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02594 302 Coils Coil 14 41 - -
Viun9g02594 302 CDD 14-3-3_plant 8 244 - -
Viun9g02594 302 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Viun9g02594 302 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Viun9g02594 302 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Viun9g02594 302 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Viun9g02594 302 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Viun9g02594 302 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Viun9g02594 302 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Viun9g02594 302 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Viun9g02594 302 FunFam 14-3-3 protein epsilon 5 251 - -
Viun9g02594 302 PANTHER 14-3-3 PROTEIN 8 242 IPR000308 -
Viun9g02594 302 Pfam 14-3-3 protein 14 238 IPR023410 -
Viun9g02594 302 SMART 1433_4 8 251 IPR023410 -
Viun9g02594 302 PIRSF 14-3-3 2 250 IPR000308 -
Viun9g02594 302 Gene3D - 2 251 IPR036815 -
Viun9g02594 302 SUPERFAMILY 14-3-3 protein 8 240 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02594 Viun-Chr9 35039788 35041952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02594 6 260 14-3-3 family AT1G78300 89.844 1.58e-168 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02594 K06630 - gmx:100529128 501.516