Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02533 ATGGGCCGTTCTGGTGATCAGAGTCTTGAAACCAAAGAGATCGATCTGAGAAGTATGTCGTCTTCTTCACATGGTCAGGTACCACAAGTCCACAAAGTGGCAGTTCCTCCGAGACAGAACCTCTTCAAGGAATTCCAAGACACCATAAAAGAAACATTCTTTGCTGATGATCCTCTAAGACCCTTCAAAGATCAATCTAAATCAAAGAAGTTCATCCTCGGTATTGAGGCCATATTTCCAATACTTAAGTGGGGAAGAAGTTACAACCTTAAAAAATTTAGAGGGGATTTAATATCTGGTCTCACTATTGCGAGTCTTTGCATTCCTCAGGATATTGGATACGCCAAGCTTGCACATTTGGCTCCACAGTATGGGCTGTACTCAAGTTTTGTTCCACCATTGATCTATGCTGTCATGGGTAGCTCTCGTGATATTGCTATAGGACCTGTAGCAGTGGTTTCTCTCTTGTTGGGGACCCTACTTAGTAATGAGATTGATCCTATTAAAAATGCGGAAGAATATCAGCGACTTGCTTTTACAGCCACTTTTTTTGCTGGAATTACTCAAGCAACGCTTGGTGTTCTTAGGTTAGGATTCTTGATCGACTTTCTATCCCATGCTGCTATTGTCGGTTTTATGGGGGGTGCTGCCATCACTATTTCCCTTCAACAGCTCAAAGGTTTTCTTGGCATTAAATCTAAAATGTTCACAACGAAAACTGATATTGTCTCTGTGCTGCATTCAGTAATCCATACAGCCCATCATGGATGGAACTGGCAAACTATAGTCATTGGAGTTAGCTTTTTGAGTTTTCTTCTGGTCACCAAATACATTGGAAAGAAAAACAAGACACTATTCTGGCTGCCAGCAATTGCTCCATTGATATCCGTTATTTTGTCCACTTTTTTTGTATTCATAACCCGTGCAGATAAGCAAGGAGTAGAAATTGTGAGAAAAATAGAAAAAGGAATCAATCCATCATCTGTTAAAGATCTTTATTTAACAGGAGAAAATCTTGGAAAAGGTTTTAAAATTGGCATCGTGGCAGGCTTGATAGCATTGACTGAAGCCTCGGCAATTGGAAGAACATTTGCATCTATGAAGGACTATCAACTGGATGGAAACAAAGAAATGGTTGCACTAGGAGCAATGAATGTTGTTGGTTCGATGACTTCCTGTTATGTGGCAACTGGTTCTTTCTCTCGTTCAGCTGTAAATTTCATGGCTGGCTGCCAAACTGCAGTCTCTAACATTGTGATGTCAGTAGTTGTGTTCTTAACCCTGGAATTCATCACTCCACTTTTTAAGTACACTCCAAATGCCATTCTTTCTGCCATCATCATTTCTGCTGTCATCAACCTCATAGACTATGAGGCAGCAATTTTGATTTGGAAGATAGATAAGTTTGACTTTGTCGCTTGCATGGGTGCATTCTTTGGGGTTGTTTTTGTCTCGGTTGAGATAGGACTTCTAATTGCTGTCTCGATATCCTTTGCAAAGATCCTACTACAAGTAACAAGACCCCGAACCGCAATTCTGGGGAAGATTCCTAGGACTAATGTCTATAGAAACATCCAACAATATCCAGAAGCTAGTAAGGTTCCAGGTGTACTGATTGTAAGAGTTGATTCTGCAGTATATTTTTCCAACTCCAATTATGTCAAAGAAAGGACATTAAGATGGCTGATGGATGAAGAAGAAAAAGTGAAAGGAGAATACCCCACAAAAATCCAGTTTTTGATAGTTGAAATGTCACCCGTTACTGATATCGACACAAGTGGCATCCAAGCCTTCCAAGAGTTACACAAAAGCCTTGAAATGAGAGGAATTGAGCTTGTTCTGGCAAATCCTGGTCCAGTAGTGACAGACAAGCTTTACGCATCCAATTTTGCAAACACAATAGGAGAGGACAAGATCTTCCTCACCGTTGCAGAGGCTGTTGCATATTGTTCTCCAAAGGTGGTTGAGGACCCTTGA 1977 0.4072 MGRSGDQSLETKEIDLRSMSSSSHGQVPQVHKVAVPPRQNLFKEFQDTIKETFFADDPLRPFKDQSKSKKFILGIEAIFPILKWGRSYNLKKFRGDLISGLTIASLCIPQDIGYAKLAHLAPQYGLYSSFVPPLIYAVMGSSRDIAIGPVAVVSLLLGTLLSNEIDPIKNAEEYQRLAFTATFFAGITQATLGVLRLGFLIDFLSHAAIVGFMGGAAITISLQQLKGFLGIKSKMFTTKTDIVSVLHSVIHTAHHGWNWQTIVIGVSFLSFLLVTKYIGKKNKTLFWLPAIAPLISVILSTFFVFITRADKQGVEIVRKIEKGINPSSVKDLYLTGENLGKGFKIGIVAGLIALTEASAIGRTFASMKDYQLDGNKEMVALGAMNVVGSMTSCYVATGSFSRSAVNFMAGCQTAVSNIVMSVVVFLTLEFITPLFKYTPNAILSAIIISAVINLIDYEAAILIWKIDKFDFVACMGAFFGVVFVSVEIGLLIAVSISFAKILLQVTRPRTAILGKIPRTNVYRNIQQYPEASKVPGVLIVRVDSAVYFSNSNYVKERTLRWLMDEEEKVKGEYPTKIQFLIVEMSPVTDIDTSGIQAFQELHKSLEMRGIELVLANPGPVVTDKLYASNFANTIGEDKIFLTVAEAVAYCSPKVVEDP 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02533 658 FunFam Sulfate transporter 31 507 653 - -
Viun9g02533 658 ProSitePatterns SLC26A transporters signature. 122 143 IPR018045 GO:0008271|GO:0008272
Viun9g02533 658 Pfam Sulfate permease family 93 475 IPR011547 GO:0016020
Viun9g02533 658 NCBIfam sulfate permease 80 646 IPR001902 GO:0016020|GO:0055085
Viun9g02533 658 MobiDBLite consensus disorder prediction 14 28 - -
Viun9g02533 658 Pfam STAS domain 528 646 IPR002645 -
Viun9g02533 658 Gene3D STAS domain 507 654 IPR036513 -
Viun9g02533 658 PANTHER SULFATE TRANSPORTER 40 651 IPR001902 GO:0016020|GO:0055085
Viun9g02533 658 MobiDBLite consensus disorder prediction 1 30 - -
Viun9g02533 658 SUPERFAMILY SpoIIaa-like 529 651 IPR036513 -
Viun9g02533 658 CDD STAS_SulP_like_sulfate_transporter 528 643 - -
Viun9g02533 658 ProSiteProfiles STAS domain profile. 527 650 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02533 Viun-Chr9 34473716 34480144 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02533 13 657 Inorganic Solute Cotransporters AT1G22150 74.884 0.0 966
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02533 K17470 - gmx:100804208 1153.66