Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02531 ATGACTTCTACTCCCACTCACCACTTTCATCTTGAGGATACCCGCCAAATAGAGACTACCCTTTGGGTTCTGGAACCTCCCAATCCACCACCTCTATGGAACAAGCTACTCACACCACTCAAGAAATCCATCTCCTCTTTTTCATCCAATAACAAGCCTTTCCTTCAACGTCTTCTTTCATTCTTAAAAACTTTGTTTCCCATCCTTTGCTGGTTCAAAAATTACAAGGCCTCAAAGTTTAAAAATGATTTGCTCGCCGGTTTAACTCTTGCCAGCCTCAGCATACCTCAGAGTATAGGATATGCTAATTTGGCGAAGCTTGATCCTCAGTATGGCTTGTACACCAGTGTTGTTCCTCCTCTTATCTATGCTGTGATGGGGAGTTCAAGAGAAATAGCTATTGGACCTGTAGCTGTAGTATCATTGCTTCTATCCTCCCTAGTCCCCAAAGTGGTAGATCCTGCTGTTGATCCTGATGCCTACAGGAGTGTTGTCTTTACGGTGACCTTGTTTGCTGGAATCTTTCAAGCTGCATTCGGTATTTTCAGGTTGGGGTTTCTTGTGGATTTTCTTTCACATGCTGCACTTGTTGGATTCATGGCAGGCGCAGCCATCGTTATTGGTCTGCAGCAGCTGAAGGGGTTGCTGGGGATTACTCACTTTACCAACAAAACTGATGTAATATCAGTGTTGGAGTCTGTATATAAGTCACTCCATCAACAGATAACATCAACAGAAAAATGGTACCCTCTGAATTTTGTCATCGGGTGTTCATTCCTGATATTCCTCTTAATAGCTCGATTTGTGGGCAGAAGAAACAAAAAACTTTTCTGGTTGCCAGCTATTGCTCCTCTTGTATCAGTTTTACTATCAACTTTAATTGTTTATTTGTCAAAAGCTGATAAGAATGGGGTTAATATAGTAAAGCATGTCAAAGGAGGCTTGAATCCAAGTTCAGTTCACGAGTTACAATTTCATGGTTCAAACGTTGGACAAATAGCTAAAATTGGATTGATTTCTGCTGTTATTGCTCTCACTGAAGCAATAGCAGTTGGTAGATCTTTTGCTTCCATTAAGGGATACCATCTTGATGGCAACAAAGAAATGTTGGCAATGGGATGCATGAACATTGCGGGATCTCTCTCTTCATGCTATGTGGCAACTGGTTCTTTCTCAAGGACTGCAGTAAATTTCAGTGCAGGATGTGAAACATCAGTATCAAATATTGTGATGGCAGTTACTGTGTTTCTGTGTCTTGAATTGTTTACAAGGCTCCTTTACTACACTCCTATGGCCATACTTGCTTCTATCATCCTCTCTGCACTTCCTGGGTTAATTGACATAAATGAAGCTTGTTATATTTGGAAGGTTGACAAATTTGACTTTCTTGCTTGCATTGGTGCCTTCTTCGGAGTCTTGTTTGTATCAGTCGAAACTGGTCTTATTATTGCAGTTTCAATCTCCTTTGCAAAGATACTGATACAATCAATCAGACCAGGGATAGAAGTTTTAGGCAGAGTTCCAAGAACAGAAGCATTCTGTGATGTTAGTCAATATCCTATGGCCACAAGCACTCCAGGCATTTTGGTCATTCGCATAAGTTCTGGTTCACTCTGCTTTGCAAATGCTAACTTTATTAGAGAAAGAATACTGAAGTGGGTCATGGAAGAAGAAAACGAACTTGCCAAGGGAAGGGTCCATGCAGTAATCTTAGACATGGGCAATCTCATGAATGTTGATACTTCTGGGATTCTAGTACTGGAGGAACTGCACAAGAGGTTGCTTTCGCGTCGCGTACAATTGGCAATGGTGAATCCGAGGTGGCTAGTGATTTACAAGCTGAAAGTGGCAAACTTTGTGGATAAAATTGGAAAGAAATGGGTTTTTCTTACTGTTGGTGAAGCTGTAGATGCATGTCTATCTTCAAAATTCCCTGACCCATGA 1944 0.412 MTSTPTHHFHLEDTRQIETTLWVLEPPNPPPLWNKLLTPLKKSISSFSSNNKPFLQRLLSFLKTLFPILCWFKNYKASKFKNDLLAGLTLASLSIPQSIGYANLAKLDPQYGLYTSVVPPLIYAVMGSSREIAIGPVAVVSLLLSSLVPKVVDPAVDPDAYRSVVFTVTLFAGIFQAAFGIFRLGFLVDFLSHAALVGFMAGAAIVIGLQQLKGLLGITHFTNKTDVISVLESVYKSLHQQITSTEKWYPLNFVIGCSFLIFLLIARFVGRRNKKLFWLPAIAPLVSVLLSTLIVYLSKADKNGVNIVKHVKGGLNPSSVHELQFHGSNVGQIAKIGLISAVIALTEAIAVGRSFASIKGYHLDGNKEMLAMGCMNIAGSLSSCYVATGSFSRTAVNFSAGCETSVSNIVMAVTVFLCLELFTRLLYYTPMAILASIILSALPGLIDINEACYIWKVDKFDFLACIGAFFGVLFVSVETGLIIAVSISFAKILIQSIRPGIEVLGRVPRTEAFCDVSQYPMATSTPGILVIRISSGSLCFANANFIRERILKWVMEEENELAKGRVHAVILDMGNLMNVDTSGILVLEELHKRLLSRRVQLAMVNPRWLVIYKLKVANFVDKIGKKWVFLTVGEAVDACLSSKFPDP 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02531 647 Pfam STAS domain 519 635 IPR002645 -
Viun9g02531 647 Gene3D STAS domain 498 642 IPR036513 -
Viun9g02531 647 Pfam Sulfate permease family 80 466 IPR011547 GO:0016020
Viun9g02531 647 ProSiteProfiles STAS domain profile. 535 639 IPR002645 -
Viun9g02531 647 NCBIfam sulfate permease 67 635 IPR001902 GO:0016020|GO:0055085
Viun9g02531 647 ProSitePatterns SLC26A transporters signature. 109 130 IPR018045 GO:0008271|GO:0008272
Viun9g02531 647 FunFam Sulfate transporter 31 498 642 - -
Viun9g02531 647 PANTHER SULFATE TRANSPORTER 45 640 IPR001902 GO:0016020|GO:0055085
Viun9g02531 647 CDD STAS_SulP_like_sulfate_transporter 519 632 - -
Viun9g02531 647 SUPERFAMILY SpoIIaa-like 523 639 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02531 Viun-Chr9 34446570 34450703 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02531 16 643 Inorganic Solute Cotransporters AT5G10180 64.734 0.0 835
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02531 K17469 - gmx:100805269 1092.8