Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02526 ATGTCCTCTTCTTTGTCGTCGACCAATTCGCCGTGCGCCGCGTGCAAGATTCAGCGCCGGAAGTGCACGCAGGAGTGTGTGTTCGCGCCGTATTTTCCGCCGGACAACCCGCAGCGCTTTGCCTACGTGCACAAGGTGTTCGGTGCCAGCAACGTCGCAAAGCTTCTCAACGAACTCAACGCGGCGCAGCGCGAGGACGCGGTTAAGTCCCTCGCCTACGAGGCCGAGGCGCGTCTGCGGGACCCCGTCTATGGCTGCGTCGGTCTCATCTCCATCCTCCAGCACCGCCTCAAGCAGTTGCAGACCGAGCTCCACCACGCCAAGAAGGAACTCGCCTCTTACATCGGACCCCACGCCATGCTCCCTCCTCCTCCTCCGCCTCCGCCGCAACCGCGCACCTTCTCTCTCTTTCCCTTCAAAACCGCACCTCCCCCTCCTCATCAGGATCTTTTCGCCTTCACTGACGACGGTGCTTCCGCTTCTCACTCTTCCCACGCCGCCTTCAACCACCTCGCTGTTCTCTCACCTACCCTCGCCGCCGATCACGCCTTCCCTCACGCACCCACCCACCCTCTCGCTCTCCCGCACCACCAACACCTAATGCTCTCCCCTATGCAATCCAAGCCCCAAACCGACCCTGCTTAA 645 0.6186 MSSSLSSTNSPCAACKIQRRKCTQECVFAPYFPPDNPQRFAYVHKVFGASNVAKLLNELNAAQREDAVKSLAYEAEARLRDPVYGCVGLISILQHRLKQLQTELHHAKKELASYIGPHAMLPPPPPPPPQPRTFSLFPFKTAPPPPHQDLFAFTDDGASASHSSHAAFNHLAVLSPTLAADHAFPHAPTHPLALPHHQHLMLSPMQSKPQTDPA 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02526 214 Coils Coil 90 110 - -
Viun9g02526 214 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Viun9g02526 214 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
Viun9g02526 214 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02526 Viun-Chr9 34349768 34351752 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02526 5 132 AS2 family AT5G66870 75.758 1.16e-67 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Viun9g02526 LOB 2.4e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02526 - - gmx:100819170 307.76