Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02514 ATGAAAATGGACATATACGAGCCATTTCAGCAAGTTGGCATGTGGGGTGACGGCTTTAAAGTTGATGGTGGCCTGAATTCAATTGCTTCCCCAATATTAATGGTTGACACTAATGTCGAGACCAAGTCTGAATATATTCCCCAAGAATCAAGAGAGCCTTCTGGAGCCGATCAAGAGACCACAGACAAAGATGTTAACAAGATGAGAAGACGTTTAGCTCAGAATAGAGAGGCTGCTCGGAAAAGTCGATTGAGGAAAAAGGCGTATGTTAAACAGTTAGAATCAAGCCGTACGAAGCTCATGCAATTGGAGCTGGAAATTGGGAGAGCAAGAAAACAGGGTCTGTACATGGGCACTGCATTAGATGCCAGCTATATAGGATCAACATCAGAAACAATAAACCCAGTTATTGTAGCATTCGAAATTGAATATGGACAATGGGTTGAAGAACAACACAGGCGGAATGAAGAGCTTAGACATGCATTTCAAACTCAAGCACCCGATGTTCAGCTGAATGTAGTGGTTCAGAGTGTCTTGAACCATTACTCAAATCTCTTCAGAATGAAAGCAGATGCTGCAAAGGCTGATGTTCTGTATTTACTCTCTGGTGTGTGGAAAGCATCAGTGGAGCGCATCTTCCTTTGGATTGGAGGGTCCCGTCCATCACAACTTCTAAACCCTTTTTTGCAGATTATCGTACCACAACTTGAGCCTTTGACTGATCCACAAATTGTTGGTATTAACAATCTCCGCCTATCATCTCAGCAAGCTGAAGATGCTCTTTCACAGGGTTTGGAAAAACTTCAGCAGAGTTTGGTCCATGACATGGCAGTTGATCCATTGGGTGTAGGAAACTTCGGACTTCAGATGGCTCTTGCTATTGACAAATTTGAGGCACTAGAAGGTTTTGTAAACCAGGCAGATCACCTTAGACAACAAACTCTGCTTCACATGTCACGCATCCTCTCACCTCACCAAGCTGCTCGTGGCTTGCTGGCTCTTGGGGAATACTTTCACCGTCTTCGCACACTTTGCTCTCTTTGGACTTCTCGTCCATGTGAACTTCCCTAG 1071 0.4407 MKMDIYEPFQQVGMWGDGFKVDGGLNSIASPILMVDTNVETKSEYIPQESREPSGADQETTDKDVNKMRRRLAQNREAARKSRLRKKAYVKQLESSRTKLMQLELEIGRARKQGLYMGTALDASYIGSTSETINPVIVAFEIEYGQWVEEQHRRNEELRHAFQTQAPDVQLNVVVQSVLNHYSNLFRMKADAAKADVLYLLSGVWKASVERIFLWIGGSRPSQLLNPFLQIIVPQLEPLTDPQIVGINNLRLSSQQAEDALSQGLEKLQQSLVHDMAVDPLGVGNFGLQMALAIDKFEALEGFVNQADHLRQQTLLHMSRILSPHQAARGLLALGEYFHRLRTLCSLWTSRPCELP 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02514 356 SMART brlzneu 62 123 IPR004827 GO:0003700|GO:0006355
Viun9g02514 356 Coils Coil 86 113 - -
Viun9g02514 356 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 70 85 IPR004827 GO:0003700|GO:0006355
Viun9g02514 356 ProSiteProfiles DOG1 domain profile. 137 351 IPR025422 GO:0006351|GO:0043565
Viun9g02514 356 FunFam BZIP family transcription factor 66 115 - -
Viun9g02514 356 Pfam bZIP transcription factor 67 100 IPR004827 GO:0003700|GO:0006355
Viun9g02514 356 Pfam Seed dormancy control 156 226 IPR025422 GO:0006351|GO:0043565
Viun9g02514 356 PANTHER TRANSCRIPTION FACTOR TGA9 3 354 - -
Viun9g02514 356 MobiDBLite consensus disorder prediction 43 67 - -
Viun9g02514 356 SUPERFAMILY Leucine zipper domain 67 101 IPR046347 GO:0003700|GO:0006355
Viun9g02514 356 Gene3D - 66 115 - -
Viun9g02514 356 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 65 100 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02514 Viun-Chr9 34169487 34172462 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02514 3 354 Calmodulin-binding Proteins AT1G22070 53.930 2.40e-127 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun9g02514 DOG1 6.9e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02514 K14431 - gmx:100794268 607.831