Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02512 ATGAGAAGACGTTTAGCTCAGAATAGAGAGGCTGCTCGGAAAAGTCGATTGAGGAAAAAGGCGTATGTTAAACAGTTAGAATCAAGCCGTACGAAGCTCATGCAATTGGAGCTGGAAATTGGGAGAGCAAGAAAACAGGGTCTGTACATGGGCACTGCATTAGATGCCAGCTATATAGGATCAACATCAGAAACAATAAACCCAGTCCTTCTGTTACATGAAACAGTTATTGTAGCATTCGAAATTGAATATGGACAATGGGTTGAAGAACAACACAGGCGGAATGAAGAGCTTAGACATGCATTTCAAACTCAAGCACCCGATGTTCAGCTGAATGTAGTGGTTCAGAGTGTCTTGAACCATTACTCAAATCTCTTCAGAATGAAAGCAGATGCTGCAAAGGCTGATGTTCTGTATTTACTCTCTGGTGTGTGGAAAGCATCAGTGGAGCGCATCTTCCTTTGGATTGGAGGGTCCCGTCCATCACAACTTCTAAACCCTTTTTTGCAGATTATCGTACCACAACTTGAGCCTTTGACTGATCCACAAATTGTTGGTATTAACAATCTCCGCCTATCATCTCAGCAAGCTGAAGATGCTCTTTCACAGGGTTTGGAAAAACTTCAGCAGAGTTTGGTCCATGACATGGCAGTTGATCCATTGGGTGTAGGAAACTTCGGACTTCAGATGGCTCTTGCTATTGACAAATTTGAGGCACTAGAAGGTTTTGTAAACCAGGCAGATCACCTTAGACAACAAACTCTGCTTCACATGTCACGCATCCTCTCACCTCACCAAGCTGCTCGTGGCTTGCTGGCTCTTGGGGAATACTTTCACCGTCTTCGCACACTTTGCTCTCTTTGGACTTCTCGTCCATGTGAACTTCCCTAG 891 0.4422 MRRRLAQNREAARKSRLRKKAYVKQLESSRTKLMQLELEIGRARKQGLYMGTALDASYIGSTSETINPVLLLHETVIVAFEIEYGQWVEEQHRRNEELRHAFQTQAPDVQLNVVVQSVLNHYSNLFRMKADAAKADVLYLLSGVWKASVERIFLWIGGSRPSQLLNPFLQIIVPQLEPLTDPQIVGINNLRLSSQQAEDALSQGLEKLQQSLVHDMAVDPLGVGNFGLQMALAIDKFEALEGFVNQADHLRQQTLLHMSRILSPHQAARGLLALGEYFHRLRTLCSLWTSRPCELP 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02512 296 PANTHER TRANSCRIPTION FACTOR TGA9 2 294 - -
Viun9g02512 296 Pfam bZIP transcription factor 3 33 IPR004827 GO:0003700|GO:0006355
Viun9g02512 296 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 3 18 IPR004827 GO:0003700|GO:0006355
Viun9g02512 296 FunFam BZIP family transcription factor 1 48 - -
Viun9g02512 296 SUPERFAMILY Leucine zipper domain 2 34 IPR046347 GO:0003700|GO:0006355
Viun9g02512 296 Pfam Seed dormancy control 96 166 IPR025422 GO:0006351|GO:0043565
Viun9g02512 296 Coils Coil 19 46 - -
Viun9g02512 296 ProSiteProfiles DOG1 domain profile. 77 291 IPR025422 GO:0006351|GO:0043565
Viun9g02512 296 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 1 33 IPR004827 GO:0003700|GO:0006355
Viun9g02512 296 Gene3D - 1 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02512 Viun-Chr9 34169487 34172463 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02512 1 294 Calmodulin-binding Proteins AT1G22070 59.459 1.12e-116 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun9g02512 DOG1 5.1e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02512 K14431 - gmx:100794268 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02512 9 34169487 34172463 Viun9g02512 9 34169487 34172463 ECH
Viun8g01411 8 22341348 22345496 Viun9g02512 9 34169487 34172463 PCT