Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02491 ATGCTCCGCTTCCTGTGTACCTTGTTGTTGCCGGCGATGACCGGGGGACGATGTCTTCCGTTGAAGGACATGGCAGAGGAAGGGGATGCCGCTGCCGTGGGGAGACCCTGTCGGTCTGACTTTGTGGCGGAAATGACTTGTGATTCTTCTGTACGTGAAATTGAAATTGATTACTTGTCCCAGGCTAGGAAAGCGCTCTCAGAACGTTCCCCCTTTGATGCTGCTGAAGAAACTTCGACTTCTGCTGCGCTCACACTGCCCAGTGGGTTGGCTGGCCTGCTGAATAGGCAGACTGATAACAGGAGACGTCCTAAGAAGTCCCATTCTGGTGGGCACAAGAGGAAATCGTCGACTAGGGCAAACCAGAAGAAGCCCGAGGATTCTAACATTTGGGTTGAGACTGAGGAGTACTTTAGAGACTTAACCTTGGCAGATATTGACTTCTTGTTTGAGTTCTCTCGCACTTCTAGTTTAGCTTTTCAGGACTATTTCTCCATTCCGCTGTTGGGAGATGTTCCGACAGACAATGTAGTTAGTAGTTATAGAGAGAATGAAATGGAGCCTGCTCCAAAAGTCAACCTAGGAGTGAGTAGTGAGGAAGAAAAAAAGGGTGATTTAGTGGGTAGTGAGGATCAAAAAAAGGGTGAATTAGTGGGTAGTGAGGATGCAAAGAAGGTTGGTGAAGCTGTGGATAGTGAGGATGGATTGTTGGTAATTGAGGCAATTGATGATGCTGCTGTTGAACAACCATGTCCTCAGGATGACAGGAATCAAGACAGTTCTGGTTCTTCTATCAGTTTAGAGTGGTTTTTGGGATGTAGGAATAAACTTTCTTTAGCTTCTGAGCGTCCCACCAAGAAAAGGAGGCTTTTGGGCGTTGAAGCTGGTTTGGAGAAAGTTATAATGACTTGTCCTTGTGATGAGGGTCAGCCGTTTTGCCATTATTGTGGCAGAGGAGACACTGGCAGTGACTCCAATAGGTTAATTGTATGCGCGGCTTGTAAAATGGCAGTTCACGGGAAGTGCTATGGTGTGCATGATGGTGTGGATGAGGCTTGGCTGTGCTCCTGGTGCAAACAAATGGGTGATGTTGATGAATCACTGAATCCTTGTGTTCTTTGTCCAAAGAAAGGTGGTGCATTAAAACCAGTTTGTAGCAGTGTGAAAGGTGCTGACTCAGCTGCATTTGTGCACTTATTCTGCTCTCTGTGGATGCCTGAGGTTTATGTAGATGATCTGGAGAAGATGGAACCTGTTATGAATGTGGGGGAAGTCAAGGAAACCAAGAAGAAATTAGTGTGTAGTGTTTGCAAATCAAAGTGTGGTGCATGTGTTCGGTGCAGCCATGGAAGCTGCAGAACTTCTTTCCACCCTTCATGTGCAAGGGAAGCTAGACATAGGATGGAGGTTTGGGCAAAGTATGGTAATGATAATGTTGAGTTGCGGGCTTTTTGCTTGAAACACTCGGATCTACCAGAGAGCAAAAGCATCTTGCCACAGGAAGCCTTTATAGAGGTTAGAAATGAATTTTCAGAAGCCAGTGACCTTCCAGTGACATTGCCAGTGAGTGGTGAACACAACTTGAGAGATTGCAGGAATGGAGGATTAGTCTCTGACAGTAATCCAGACAAATTGAACCATAATGACGAACCACCAGATGGAGGATTACCTGATTGCAGGTTAAGTGATCACATGTTGGGATGTGTTGCTGTGCCCCAACAAAATGTTGAAGTGGTAGAGAGAGAGAATGAGAATGCTGATGGATCTGATTCTAACAGTTTTGCTCTAGTTTTGAAGAAGTTGATTGATCGAGGAAAAGTTAACGTAAAAGATGTAGCATTGGAGATTGGCATTTCACCAGATACATTAACTGCAAATACAAATGAAGCTTATATGGCCCCTGATGTCCGACACAAAATAGTGAATTGGCTAAAAAGCCATGTATATACCAGTGCATTTCAGAAGGGTTTAAAGGTCAAATTCAAACCAGCCAATGCATCCAAAATTGATAGTGGAGCCACGGATGGCTCTGATACTTTACCAATATCAGACTCGGGTTTGCTGGATCCTGTTGCTGTTAAGTCGGTTCCACCAAGGAGGAGAACAACCAATAACATTAGGATTTTGAAGGATAATAAAGTGATTTGTTCATCTGAGGGGGTTACAAGTGAGAATGGGATGCCGGTGCACATGTGCAGAGTAGGACAGCCCAACTGCGAGAATCCAACAAGTTCCAATGAAGCATCCATCCCCAATGCAACGGAAACGAAATTACTCAAGTCCGAGGATATTTTTCAAGAAGTTCAAGAGAATGCAGATAAACCTCACAAATCCTGCTTATCTGGAAAGGGTGCTGTCTCTAGTTACATTCATCCATTCATCAACAAGAAATTGCTGCAGATTCAGGATGGGGTGCCCTTGGAGAATGTTATATGTTCAACTGACAAGGGAAATTCGGGTTTGGTTGAATCCTTTGGAGCTAGCGGCTGCTCAAATAGCCAAAATCAGAACTTAACTGGCAGTGAAATATCAAAGCCTGATGAAGTAAAGAGGGAGCAATTGGTCAGGACTAAAGAAGTGGAACTTTTGGAAATTTCTCCACAAGATGAGTTGGAGGGGGAACTTGTTTATTTTCAATATAGGTTATTGCAGAATGTGGTTGCAAAAAGGAGGCATATTGATAATTTAATCTACAGTGTTGCAAAGAGTTTACCACATGAGATTGATAAGGCACATCAACAAAGATGGGATGATGTTATTGTTAATCAATATCTACGTGATCTTAGAGAGGCAAAAAAGCAGGGCAGAAAAGAAAGAAAGCACAAGGAAGCACAGGCAGTATTGGCTGCTGCAACTGCTGCTGCTGCAGCATCTTCTAGGTCATTCCGGAAAGACACATTAGATGAATCTATGCAACAGGAGAATTTTTTAAAATCAGACCATTTAAATGGAAGGACGGGTGCTTGTTCTCAACCAATGCCTCGAGCCAAAGAGACACTTTCAAGAGTAGCTGTGACTAGAACTTCATCGGAGAAATATTCGGATTTCTGCATGCCAGCTTCAGATTTTTCTAAGGAGCAATGTAAATCATGTGATATTTGTAGACGATCAGAGACTATTTTAAACCCCATCTTAGTCTGCTCTGGTTGTAAGGTTTCAGTCCACTTAGATTGCTACCGTAGTGTGAAAGAAACGACAGGTCCGTGGTACTGTGAGTTATGTGAAGATTTGTCCTCTAGAAGCTCTGGGGCATCTGCCATCAACTTTTGGGAGAAACCTTATATTGGTGTAGAATGTGCTCTCTGTGGTGGTACTACTGGTGCTTTTAGGAAGTCTTCTGACGGTCAATGGGTTCATGCTTTCTGTGCTGAGTGGGTTTTTGAGTCTACGTTCAGAAGAGGACAAATAGATGCTGTGGAAGGAATGGAAAGTGTGCCAAAAGGCGTTGACACTTGTTGCATCTGCCATTGCAAGAATGGTGTATGCATGAAGTGTTGCTATGGGCATTGTCAGACCACTTTCCACCCATCCTGTGCTAGAAGTGCTGGTTTGTACATGAATGCAAGGACTGCTGGTGGCAAGGTTCAACACAAAGCTTACTGTGAAAAGCATAGTCTGGAGCAAAAAGCGAAGGCTGAAAATCAAAAACATGGAATTGAAGAGTTAAAAAGTATCAGGCAAATTAGGGTTGAACTAGAGAGATTACGTCTCCTTTGTGAAAGAATTGTCAAACGTGAAAAAATAAAGCGGGAATTAGTACTATGTTCACATGACATACTTGCCTTTAAAAGAGATAATGTTGCGAGGTCTGTGCTAGTTCATAGCCCTTTCATCCTTCCGGATGGTAGTTCAGAATCAGCTACAACGTCTCTAAAAGGGAACACAGAGGGATACAGATCATGCAGTGAACCACCCCAAAGATCAGATGATGTTACTGTTGACAGTTCTATTTCTGCTAAGCACCGTGTCAGAGTTGCCATATCTATGGATGCAGACCCAAAATTGGATGATGACTGTTCAACCTCGCAGAGCAAATATAACCACAAGATCCCAGAAAGAACACAATTTTCTGGCAAGAAGATTCCTCATAGAGCTGCTGCTGCTGCATCACGAAATATTTTGGATGAAGGTGGATGGAGATCCAAATCTAGAAAGCATGCTGAAACATTTGGAAAAGAGCTTGTTATGACGTCAGATGAAGCATCCATGAAGAATTCAATGCTGCCAAAAGGATATGCATATGTTCCTGCTGATTGTCTGTCAAATGACAAGCACTCTAACGAGGATATGCATGACAGATAG 4302 0.4333 MLRFLCTLLLPAMTGGRCLPLKDMAEEGDAAAVGRPCRSDFVAEMTCDSSVREIEIDYLSQARKALSERSPFDAAEETSTSAALTLPSGLAGLLNRQTDNRRRPKKSHSGGHKRKSSTRANQKKPEDSNIWVETEEYFRDLTLADIDFLFEFSRTSSLAFQDYFSIPLLGDVPTDNVVSSYRENEMEPAPKVNLGVSSEEEKKGDLVGSEDQKKGELVGSEDAKKVGEAVDSEDGLLVIEAIDDAAVEQPCPQDDRNQDSSGSSISLEWFLGCRNKLSLASERPTKKRRLLGVEAGLEKVIMTCPCDEGQPFCHYCGRGDTGSDSNRLIVCAACKMAVHGKCYGVHDGVDEAWLCSWCKQMGDVDESLNPCVLCPKKGGALKPVCSSVKGADSAAFVHLFCSLWMPEVYVDDLEKMEPVMNVGEVKETKKKLVCSVCKSKCGACVRCSHGSCRTSFHPSCAREARHRMEVWAKYGNDNVELRAFCLKHSDLPESKSILPQEAFIEVRNEFSEASDLPVTLPVSGEHNLRDCRNGGLVSDSNPDKLNHNDEPPDGGLPDCRLSDHMLGCVAVPQQNVEVVERENENADGSDSNSFALVLKKLIDRGKVNVKDVALEIGISPDTLTANTNEAYMAPDVRHKIVNWLKSHVYTSAFQKGLKVKFKPANASKIDSGATDGSDTLPISDSGLLDPVAVKSVPPRRRTTNNIRILKDNKVICSSEGVTSENGMPVHMCRVGQPNCENPTSSNEASIPNATETKLLKSEDIFQEVQENADKPHKSCLSGKGAVSSYIHPFINKKLLQIQDGVPLENVICSTDKGNSGLVESFGASGCSNSQNQNLTGSEISKPDEVKREQLVRTKEVELLEISPQDELEGELVYFQYRLLQNVVAKRRHIDNLIYSVAKSLPHEIDKAHQQRWDDVIVNQYLRDLREAKKQGRKERKHKEAQAVLAAATAAAAASSRSFRKDTLDESMQQENFLKSDHLNGRTGACSQPMPRAKETLSRVAVTRTSSEKYSDFCMPASDFSKEQCKSCDICRRSETILNPILVCSGCKVSVHLDCYRSVKETTGPWYCELCEDLSSRSSGASAINFWEKPYIGVECALCGGTTGAFRKSSDGQWVHAFCAEWVFESTFRRGQIDAVEGMESVPKGVDTCCICHCKNGVCMKCCYGHCQTTFHPSCARSAGLYMNARTAGGKVQHKAYCEKHSLEQKAKAENQKHGIEELKSIRQIRVELERLRLLCERIVKREKIKRELVLCSHDILAFKRDNVARSVLVHSPFILPDGSSESATTSLKGNTEGYRSCSEPPQRSDDVTVDSSISAKHRVRVAISMDADPKLDDDCSTSQSKYNHKIPERTQFSGKKIPHRAAAAASRNILDEGGWRSKSRKHAETFGKELVMTSDEASMKNSMLPKGYAYVPADCLSNDKHSNEDMHDR 1433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02491 1433 ProSiteProfiles Extended PHD (ePHD) domain profile. 368 489 IPR034732 -
Viun9g02491 1433 SMART PHD_3 312 359 IPR001965 -
Viun9g02491 1433 SMART PHD_3 1151 1205 IPR001965 -
Viun9g02491 1433 SMART PHD_3 433 489 IPR001965 -
Viun9g02491 1433 SMART PHD_3 1030 1075 IPR001965 -
Viun9g02491 1433 ProSiteProfiles Extended PHD (ePHD) domain profile. 1096 1205 IPR034732 -
Viun9g02491 1433 PANTHER PHD FINGER PROTEINS 105 961 - -
Viun9g02491 1433 SUPERFAMILY FYVE/PHD zinc finger 1022 1075 IPR011011 -
Viun9g02491 1433 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1095 1206 IPR013083 -
Viun9g02491 1433 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 365 491 IPR013083 -
Viun9g02491 1433 ProSiteProfiles Zinc finger PHD-type profile. 310 361 IPR019787 -
Viun9g02491 1433 MobiDBLite consensus disorder prediction 101 119 - -
Viun9g02491 1433 MobiDBLite consensus disorder prediction 543 557 - -
Viun9g02491 1433 Pfam PHD-finger 1042 1075 - -
Viun9g02491 1433 Pfam PHD-finger 326 359 - -
Viun9g02491 1433 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1020 1080 IPR013083 -
Viun9g02491 1433 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 304 363 IPR013083 -
Viun9g02491 1433 ProSiteProfiles Zinc finger PHD-type profile. 1028 1077 IPR019787 -
Viun9g02491 1433 MobiDBLite consensus disorder prediction 531 557 - -
Viun9g02491 1433 MobiDBLite consensus disorder prediction 1283 1314 - -
Viun9g02491 1433 MobiDBLite consensus disorder prediction 197 219 - -
Viun9g02491 1433 Pfam PHD-zinc-finger like domain 370 488 - -
Viun9g02491 1433 Pfam PHD-zinc-finger like domain 1097 1204 - -
Viun9g02491 1433 SUPERFAMILY FYVE/PHD zinc finger 302 359 IPR011011 -
Viun9g02491 1433 MobiDBLite consensus disorder prediction 93 128 - -
Viun9g02491 1433 CDD ePHD 1099 1204 - -
Viun9g02491 1433 MobiDBLite consensus disorder prediction 1283 1313 - -
Viun9g02491 1433 Coils Coil 925 945 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02491 Viun-Chr9 34047110 34059649 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02491 307 495 C2H2 Transcription Factor Family AT3G14740 29.688 1.68e-16 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Viun9g02491 zf-HC5HC2H_2 4.7e-23 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02491 - - vum:124846061 2659.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02491 9 34047110 34059649 Viun9g02491 9 34047110 34059649 ECH