Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02487 ATGCATCACCTATCTCGGATTTTTGAGCACCGCAACCGCACCAAGGCCATGGATCGCAAAAACCCGCGGAGGAAGCCCAAGCTCGAGCGCCGCAACGCTCTCAAGTACTCTGAATACGACGCCGGATCGTCTACCTCCGACGAAGCACTCTACACGCGCTCTATGGAGTTTTACGACCGCACCAGCTTCCGAATCGAGGGCGTCGAGGGAGAGTTCGATCGAATTTGCCGGAGTTTGGGCCTCTCCGGCCCAGAAGACTTCTCTATTCCCGCTGCGGCCTGGGAAGCCATGAAGTTTCGTTCCTCTTCGGATATCCTCCCGAGACTGAATCTCGAAAACCTCGATATTCCCGAGGAAGAGGAAGAGGACGAAGAAGAAGAAGAAGTACCGAAGGTAAACGAGGAGAGAATAGTAAAACCACCAGAGGATAGTGAATTTAGTGAAAAATTAGGAGATGGGGTTAGGGTTTTGGAGGCAGATGAGTCGAGCACTGGTATTAAGGGTGCTCGTCCACCGATGCTGAAGCCGCCGCCGGGGGTGAGAGTTCAGATGGTGGATGATAGCTCGTGTTCCACGTGGGACCTTTTGAGGGATTTGGCTCCGATTGGTGAAGGGTTATCGTTGAAGCACTCCGAGCATACGAGGGAAGTAGAGAATGATGCACCGCTAGGGGGAGTAGAGAGGGAGGTATCGGAGAAAGAAGAAGGGGAAGTGGATAGAGCGAGCCCGAAGAGGGAAGAGGAAGAGAATGTGGATAATGCAGCGAGGATTGCGGAGATCGTGGCTGGGCTTTCGGAATCATGTTCGTTTTCCACGTCGAACGAAGATGATTCTTCTAGTAGTACCACGGATCATACCTCCAACAATATTTCTCCGCAAGGGAGAATCAAGCGGATTATTACCGCCGGAAGTTGGCAGAAGGGTGAGTTTCTTGGGGGTGGCTCGTTTGGCACCGTTTATGAAGGAATTTCTGATGATGGCTTCTTTTTCGCTGTAAAAGAAGTTTCATTGCTCGATCAGGGGACTCAGGGAAAGCAAAGTGTATATCAACTGGAGCAGGAAATAGCACTTTTGAGTCAGTTTGAGCATGAAAATATTGTTCAATACTATGGCACAGAAATGGATGAATCAAAGCTGTACATCTTTCTTGAGTTTGTAACCAAAGGTTCCCTTAGAAGCCTCTACCAAAAGTATACTCTTCGAGATTCCCAAGTATCTGCCTATACAAGACAGATTCTGCATGGTATGAAGTATCTTCATGATCGAAATGTGGTTCACAGGGATATCAAATGTGCAAATATATTGGTGGATGCAAGCGGATCTGTCAAGCTTGCAGATTTTGGATTGGCCAAGGCAACCAAAATGAATGACGTTAAATCAATGAAGGGTACAGCATTCTGGATGGCCCCGGAGGTTGTGAAAGGAAAGAACAAGGGTTATGGGCTTCCAGCTGATATATGGAGTCTGGGATGCACTGTACTGGAGATGTTAACAGGCCAACTTCCGTACTGTGATTTGGAATGGATGCAGGCATTATTTAAAATTGGAAAAGGTGTACCACCATCTATTCCTGACTCCCTTTCGAGAGATGCAACCGATTTTATCCTGCAGTGCCTTCAAGTTAATCCAAATGATCGTCCCACCGCTGCTCAACTTCTAAACCATTCATTTGTCCAAAGGCCACTTTCTCAGACCTCTGGTTCTTCGTTTCCTCATGTTCTTGGCCGGAAGGGTTAA 1737 0.4796 MHHLSRIFEHRNRTKAMDRKNPRRKPKLERRNALKYSEYDAGSSTSDEALYTRSMEFYDRTSFRIEGVEGEFDRICRSLGLSGPEDFSIPAAAWEAMKFRSSSDILPRLNLENLDIPEEEEEDEEEEEVPKVNEERIVKPPEDSEFSEKLGDGVRVLEADESSTGIKGARPPMLKPPPGVRVQMVDDSSCSTWDLLRDLAPIGEGLSLKHSEHTREVENDAPLGGVEREVSEKEEGEVDRASPKREEEENVDNAARIAEIVAGLSESCSFSTSNEDDSSSSTTDHTSNNISPQGRIKRIITAGSWQKGEFLGGGSFGTVYEGISDDGFFFAVKEVSLLDQGTQGKQSVYQLEQEIALLSQFEHENIVQYYGTEMDESKLYIFLEFVTKGSLRSLYQKYTLRDSQVSAYTRQILHGMKYLHDRNVVHRDIKCANILVDASGSVKLADFGLAKATKMNDVKSMKGTAFWMAPEVVKGKNKGYGLPADIWSLGCTVLEMLTGQLPYCDLEWMQALFKIGKGVPPSIPDSLSRDATDFILQCLQVNPNDRPTAAQLLNHSFVQRPLSQTSGSSFPHVLGRKG 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02487 578 MobiDBLite consensus disorder prediction 115 130 - -
Viun9g02487 578 MobiDBLite consensus disorder prediction 131 149 - -
Viun9g02487 578 Gene3D Transferase(Phosphotransferase) domain 1 303 572 - -
Viun9g02487 578 MobiDBLite consensus disorder prediction 10 40 - -
Viun9g02487 578 ProSitePatterns Serine/Threonine protein kinases active-site signature. 424 436 IPR008271 GO:0004672|GO:0006468
Viun9g02487 578 SUPERFAMILY Protein kinase-like (PK-like) 302 561 IPR011009 -
Viun9g02487 578 ProSitePatterns Protein kinases ATP-binding region signature. 311 333 IPR017441 GO:0005524
Viun9g02487 578 FunFam Mitogen-activated protein kinase 1, putative, expressed 303 570 - -
Viun9g02487 578 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 134 566 - -
Viun9g02487 578 MobiDBLite consensus disorder prediction 115 149 - -
Viun9g02487 578 SMART serkin_6 305 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02487 578 Pfam Protein kinase domain 306 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02487 578 MobiDBLite consensus disorder prediction 268 293 - -
Viun9g02487 578 ProSiteProfiles Protein kinase domain profile. 305 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02487 578 MobiDBLite consensus disorder prediction 210 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02487 Viun-Chr9 34032293 34039594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02487 4 562 MAP Kinase Kinase Kinase AT4G08500 48.539 7.57e-167 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Viun9g02487 Pkinase 7e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02487 K13414 - gmx:100819999 916.761