Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02481 ATGGCGACTTCAGTCGACAACCGTCCGTTCACCGCCCACCGGCACGGCGTCGTTCGCACCTACAAGCCCGCCCCGGAACTCCCGCGTCCCATGAAGTTACCCCTGCCAACACCGCTCTCCGATTCCTCAAGCGACGAAGAAGAAGAAACCACTGCGATGAAGGAACTGATTCTTAAGTCCAGCGTCGAAGTTGAATCCTCTATTTTCGACCCTCGCGACGATGGAACCGCCGACCACTGGGTCAAACGGAACGCCTCCCTGATCCGGTTGACGGGGAAGCATCCCTTAAACTCGGAGCCACCACTCGATCGTCTCATGCACCACGGTTTCATCACCCCGGTTCCCCTCCACTACGTCCGTAACCACGGGCCCGTGGCACGGGCTCGCTGGGAGGACTGGACCGTTGAGGTCACGGGCCTCGTTTCTCGGCCCACGTGCTTCACCATGGAGCAGCTGCTCCACGACTTTCCCAGCCGCGAGTTCCCTGTCACACTTGTCTGCGCTGGGAACAGGCGCCAGGAACAGAACATGGTGAAACAGAGCATCGGTTTCAACTGGGGGCCCGCCGTCGTCTCTACTTCGGTGTGGCGCGGTGTACCGTTGCGGAGCCTGTTGAAGAAGTGCGGGATCTACAGTCGCACGAAGGGAGCGCTTCACGTGTGCTTCGAAGGCGCCGAGGATCTGCCCGCTGACGGTGGGTCCAAGTACGGGACGAGTATCAGGAGGGAGGTTGCACTCGATCCCTCTCGCGACATCATCCTCGCTTACATGCAAAACGGGGAGCTTTTGTCCCCGGATCATGGCTTCCCCGTTAGGATGATAATACCCGGTTTCGTCGGCGGCCGCATGGTGAAATGGTTGAAGCGCATCATTGTCTCTACCCAGGAATCTCAAAGCTATTACCATTACATGGATAACAGGGTACTTCCATCTCACGTTGACGCCGAACTTGCCAATGCAGAAGCTTGGTGGTACAAGCCAGAGTATTGCATCAACGAGGTCAACATAAACTCCGTCATAACAACGCCCTCTCACGAAGAGATCTTGCCCATCAACTCATGGACGACTCAGTTGCCTTATTTCATCAAAGGCTACGCTTATTCCGGAGGTGGGAGAAAGGTGACACGTGTGGAGGTAACGCTGGACGGTGGTGAAACGTGGCGAGTGTGCAGTGTGGAACGTCCCGAGAAGCCGAACAAATATGGGAAGTACTGGTGTTGGTGTTTCTGGTCGTTGGAGGTGGAGGTGTTGGATCTTCTCGCAGCAAAAGAGATTGCGGTGCGAGCTTGGGATGAGGCCCTCAACACCCAGCCTCAGAAACTCATCTGGAATGTTTTGGGAATGATGAACAATTGCTGGTTCAGAGTGAAGACGAACGTGTGCAGGCCGAAGAAGGGTGAGATTGGTATAGTGTTCGAGCACCCCACCCAACAAGGCAACCAATCTGGCGGATGGATGGCAAGAGAGAGACAGCTGGAGAAATCATCAGAGTCCAACCCATCCCTCAAGAAGAGTGTTTCCTCCCCATTCATGAACACGACCACCAAAACCTTTTCCATCTCCGAAGTAAGAAAACACAACAACCGCGATTCAGCTTGGATCATAGTCCACGGAAATGTCTACGATTGCACCCGCTTTCTCAAAGACCATCCCGGCGGCGAAGATAGCATCCTCATCAACGCCGGCACCGACTGTACAGAGGAGTTCGATGCGATCCACTCCGGCAAAGCCAAGGAAATGCTCGAAGCCTACCGAATCGGCGAGCTCATGACCACCGACTACACCTCCTCTGACTCCTCTTCCCCGAACTCCACCGTGCATGGGAATTCTGAAACCACCCACTTGGCCCCAATCAGGGAGGTGGCTCTCAACCCACGCGAGAAAATCCCATGCAAGCTCCTCTCCAGAACCTCCATCTCCCACGACGTTAGGCTCCTCCGCTTTGCGTTGCCCAGCGAGGACCAGCTCATGGGTTTGCCAGTCGGGAAGCACGTATTCTTGTGTGCCACCGTCGACGAGAAGCTATGCATGCGAGCCTACACTCCCACAAGCAGTGTAGATGAAGTGGGTTTCTTTGACCTCGTCGTCAAGGTTTACTTCAAAGGAGTGCATCCTAAGTTCCCCAACGGTGGGATCATGTCTCAACACTTGGACACTCTCCCCATTGGCTCTTTCCTGGACGTGAAAGGCCCTCTAGGCCACATAGAATACACCGGCAGAGGAAACTTCCTCGTCCAGGGAAAGCCTAGGTTTGCCAAGAGGCTAGCCATGTTGGCTGGTGGAACCGGGATCACACCCATCTACCAAGTGGTTCAAGCCATTCTAAAGGACCCAGAGGACCGCACCGAAATGCATATGGTGTACGCGAATCGAACCGAGGATGATATATTGCTGAGAGATGAGCTTGATGAATGGGCTAAGAAACATGACAGGCTCAAGGTGTGGTACGTGGTGCAAGAAAGCGTAAGAGAAGGGTGGGAATTCAGTGTGGGGTTCATCACCGAGACCATCCTGCGGGAGCATGTTCCACTTGCATCTCCTGATACCTTGGCGTTGACTTGTGGTCCACCACCCATGATTCAGTTCGCGGTGCAACCCAATTTGGAGAAGTTGGGCTACGACATCCACAACGACTTGCTCGTGTTTTAG 2649 0.5462 MATSVDNRPFTAHRHGVVRTYKPAPELPRPMKLPLPTPLSDSSSDEEEETTAMKELILKSSVEVESSIFDPRDDGTADHWVKRNASLIRLTGKHPLNSEPPLDRLMHHGFITPVPLHYVRNHGPVARARWEDWTVEVTGLVSRPTCFTMEQLLHDFPSREFPVTLVCAGNRRQEQNMVKQSIGFNWGPAVVSTSVWRGVPLRSLLKKCGIYSRTKGALHVCFEGAEDLPADGGSKYGTSIRREVALDPSRDIILAYMQNGELLSPDHGFPVRMIIPGFVGGRMVKWLKRIIVSTQESQSYYHYMDNRVLPSHVDAELANAEAWWYKPEYCINEVNINSVITTPSHEEILPINSWTTQLPYFIKGYAYSGGGRKVTRVEVTLDGGETWRVCSVERPEKPNKYGKYWCWCFWSLEVEVLDLLAAKEIAVRAWDEALNTQPQKLIWNVLGMMNNCWFRVKTNVCRPKKGEIGIVFEHPTQQGNQSGGWMARERQLEKSSESNPSLKKSVSSPFMNTTTKTFSISEVRKHNNRDSAWIIVHGNVYDCTRFLKDHPGGEDSILINAGTDCTEEFDAIHSGKAKEMLEAYRIGELMTTDYTSSDSSSPNSTVHGNSETTHLAPIREVALNPREKIPCKLLSRTSISHDVRLLRFALPSEDQLMGLPVGKHVFLCATVDEKLCMRAYTPTSSVDEVGFFDLVVKVYFKGVHPKFPNGGIMSQHLDTLPIGSFLDVKGPLGHIEYTGRGNFLVQGKPRFAKRLAMLAGGTGITPIYQVVQAILKDPEDRTEMHMVYANRTEDDILLRDELDEWAKKHDRLKVWYVVQESVREGWEFSVGFITETILREHVPLASPDTLALTCGPPPMIQFAVQPNLEKLGYDIHNDLLVF 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02481 882 Gene3D - 333 508 - -
Viun9g02481 882 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 515 590 IPR001199 -
Viun9g02481 882 SUPERFAMILY Riboflavin synthase domain-like 619 738 IPR017938 -
Viun9g02481 882 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 549 559 IPR001709 GO:0016491
Viun9g02481 882 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 794 805 IPR001709 GO:0016491
Viun9g02481 882 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 782 791 IPR001709 GO:0016491
Viun9g02481 882 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 678 685 IPR001709 GO:0016491
Viun9g02481 882 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 756 775 IPR001709 GO:0016491
Viun9g02481 882 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 850 858 IPR001709 GO:0016491
Viun9g02481 882 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 513 593 IPR036400 -
Viun9g02481 882 PANTHER SULFITE REDUCTASE 65 463 - -
Viun9g02481 882 MobiDBLite consensus disorder prediction 478 507 - -
Viun9g02481 882 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 139 174 IPR022407 GO:0043546
Viun9g02481 882 Pfam Mo-co oxidoreductase dimerisation domain 329 460 IPR005066 GO:0016491|GO:0030151
Viun9g02481 882 PRINTS Eukaryotic molybdopterin domain signature 280 293 IPR008335 GO:0016491
Viun9g02481 882 PRINTS Eukaryotic molybdopterin domain signature 331 343 IPR008335 GO:0016491
Viun9g02481 882 PRINTS Eukaryotic molybdopterin domain signature 376 388 IPR008335 GO:0016491
Viun9g02481 882 PRINTS Eukaryotic molybdopterin domain signature 110 126 IPR008335 GO:0016491
Viun9g02481 882 PRINTS Eukaryotic molybdopterin domain signature 403 413 IPR008335 GO:0016491
Viun9g02481 882 PRINTS Eukaryotic molybdopterin domain signature 189 204 IPR008335 GO:0016491
Viun9g02481 882 PRINTS Eukaryotic molybdopterin domain signature 88 102 IPR008335 GO:0016491
Viun9g02481 882 PRINTS Eukaryotic molybdopterin domain signature 362 376 IPR008335 GO:0016491
Viun9g02481 882 PRINTS Eukaryotic molybdopterin domain signature 174 186 IPR008335 GO:0016491
Viun9g02481 882 PRINTS Eukaryotic molybdopterin domain signature 247 263 IPR008335 GO:0016491
Viun9g02481 882 PRINTS Eukaryotic molybdopterin domain signature 264 277 IPR008335 GO:0016491
Viun9g02481 882 PRINTS Eukaryotic molybdopterin domain signature 163 174 IPR008335 GO:0016491
Viun9g02481 882 PRINTS Eukaryotic molybdopterin domain signature 441 454 IPR008335 GO:0016491
Viun9g02481 882 PRINTS Eukaryotic molybdopterin domain signature 428 440 IPR008335 GO:0016491
Viun9g02481 882 Pfam Oxidoreductase NAD-binding domain 757 864 IPR001433 GO:0016491
Viun9g02481 882 Gene3D - 72 323 IPR036374 -
Viun9g02481 882 PRINTS Cytochrome B5 reductase signature 723 737 - -
Viun9g02481 882 PRINTS Cytochrome B5 reductase signature 756 775 - -
Viun9g02481 882 PRINTS Cytochrome B5 reductase signature 850 858 - -
Viun9g02481 882 PRINTS Cytochrome B5 reductase signature 657 668 - -
Viun9g02481 882 PRINTS Cytochrome B5 reductase signature 794 805 - -
Viun9g02481 882 PRINTS Cytochrome B5 reductase signature 678 685 - -
Viun9g02481 882 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 626 738 IPR017927 GO:0016491
Viun9g02481 882 PRINTS Cytochrome B5 signature 540 550 IPR001199 -
Viun9g02481 882 PRINTS Cytochrome B5 signature 577 589 IPR001199 -
Viun9g02481 882 PRINTS Cytochrome B5 signature 550 564 IPR001199 -
Viun9g02481 882 PRINTS Cytochrome B5 signature 565 572 IPR001199 -
Viun9g02481 882 SMART Cyt_b5_2 518 590 IPR001199 -
Viun9g02481 882 SUPERFAMILY E set domains 333 460 IPR014756 -
Viun9g02481 882 Pfam Oxidoreductase molybdopterin binding domain 122 301 IPR000572 -
Viun9g02481 882 Gene3D - 733 882 IPR039261 -
Viun9g02481 882 FunFam Nitrate reductase [NADH] 733 882 - -
Viun9g02481 882 Pfam Cytochrome b5-like Heme/Steroid binding domain 521 589 IPR001199 -
Viun9g02481 882 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 546 553 IPR018506 GO:0020037
Viun9g02481 882 CDD eukary_NR_Moco 73 458 - -
Viun9g02481 882 Gene3D - 511 594 IPR036400 -
Viun9g02481 882 FunFam Nitrate reductase 74 323 - -
Viun9g02481 882 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 726 876 IPR039261 -
Viun9g02481 882 CDD cyt_b5_reduct_like 631 874 - -
Viun9g02481 882 MobiDBLite consensus disorder prediction 1 51 - -
Viun9g02481 882 FunFam Sulfite oxidase, mitochondrial 513 594 - -
Viun9g02481 882 Gene3D Translation factors 618 732 - -
Viun9g02481 882 FunFam Nitrate reductase 333 509 - -
Viun9g02481 882 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 71 331 IPR036374 -
Viun9g02481 882 PIRSF Nitr_rd_NADH 11 881 IPR012137 GO:0006809|GO:0042128|GO:0050464
Viun9g02481 882 Pfam Oxidoreductase FAD-binding domain 631 737 IPR008333 -
Viun9g02481 882 FunFam NADH-cytochrome b5 reductase 618 732 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02481 Viun-Chr9 33997713 34001512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02481 619 873 NADPH P450 reductases AT5G17770 37.984 5.53e-49 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02481 K10534 - gmx:732634 1553.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02481 9 33997713 34001512 Viun9g02481 9 33997713 34001512 ECH