Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02470 ATGGATGGGAAGCCTAACCCGGATTCCTCCTCCCCGGACTTCCTCCGCCACGTTCAAGCCGCCTTGAAACGACACCGTCCACTCGGTTCAATGCAGTCCAATAGCATAAGGCCAAGGCGCACGCTACTTCCACAACGAAACCTATCTAACACTCCCTCCGACCCCACCAATTCTCAAGAACAAGCTTCTTCCAAGGTCTCACTCAACACCGTCGTCCCTTCCCAAAACCTAGACGTTCAGAAGAAAGTTCAATTTTCAGTTCACACGAATTCTACTGCGCAGGAAATGGAGTGGGTTGAAGGCAACCAAATTGAAGCATCGTCGTCATCATCATCATTGCTTGGATGCAACCAGAAGGAGGATGTTCAGCAGGCTGGCTTTGACGCAAGTTTGAGATGTGATAGTGGAGTGAGTTCCCTGTTGCCAAAGAGAAGTGTGGTTACTCAGGATCATTTGCAGCAATTCAGTAGCTTTTTGAGTCAGCCAGCTACCCAGTCTTCGGTTTTGGGACCTTCATTTGCTACAACCACCTCAGTTCATTCAGCTTCGGCACCTATGCTAAATTCAACAACACGATATTCTCATTCGCATCTAGATGGTGGCTCAAATCTGACTGCTGAGCCTTTTGGGGAGGTTAATGCTAATCCTCGTCCTGTAACTGAAGGTGGGGTTGTGAAATCAGAAAATGTTTTCCAAAAGGAAACCAACAGAATGTTGGTGGATCGGGGGGCAGAAGCTGAAGTGCAGGCTTCTTGTCTTGGTGTTGGTGATGCAGACTTGACGTCTAAAGAGAGCCATCGATCTACGGAGCAACAGGGGGGGGTTTTGAAAGAATCTGGCAATTCTAAATATACTTGGGATGATGGTAAAGGGAAAGAGGCTGTGGATGTTGCCACTATACAACCGCAGGCACTACTTCCCACATCCACAATCACATCTTCAGATGTGAAGTTGGAGTCTTCTAAGGTAGAAAAGCGAGAGAAGATTGCAAGTAGTAAAGGTGCATCAGCTCCCCGTAAGAGGACTTATGACCCTGATTTGTTTTTTAAAGTTAATGGAAAGCTTTATCAACGTCTTGGCAAGATAGGTAGTGGTGGAAGCAGTGAGGTACACAAAGTGATTTCATCAGACTGTAGGATATATGCCCTTAAAAAGATCAAGCTCAAGGGTCGTGATTATGCTACTGCATTTGGGTTTTGTCAAGAGATTGAGTATCTCAATAGGCTGAAGGGAAAGGATAATATCATACAACTCATAGATTATGAGGTGACAGACAAGGCATTGCTTGAGGAAGTTATGAAAGGCTCTTTAAGTAATAAAGATGGCCGGGTCAAGGATGATGGATGTATATACATGGTCCTTGAATATGGAGAAATTGATTTGGCTCACATGTTGTCTCAGAAGTGGAAGGAACTGGATAGAAGCCACCGGACCATAGATGAGAACTGGCTTCGATTTTATTGGCAGCAAATTCTTCTAGCTGTCAACACTATTCATGAGGAACGTATTGTGCACTCTGACTTGAAGCCAGCCAACTTCCTTCTTGTCAAAGGATCCCTAAAATTAATTGATTTTGGTATAGCCAAAGCAATAATGAATGACACAACGAACATCCAACGGGATTCACAGGTGGGTACACTAAGTTACATGTCTCCTGAGGCATTTATGTGTAATGAGACTGATGGCAATGGAAACATCATAAAGTGTGGCCGGTCATCAGATATCTGGTCCCTGGGTTGCATTCTTTATCAAATGGTATATGGGAGAACACCTTTTTCTGATTACAAGACATTTTGGGCCAAATTCAAGGTCATAACAGATCCAAATCATGAAATTACGTATGAACCAGTTTCAAACCCATGGCTTTTGGATCTTATGATGAGGTGTTTAACATGGGACCGCAATCAAAGGTGGAGAATACCTCAGCTACTGGAACATCCATTTCTTGTTCCTCCTATACCATCTCATCCATCTTTGCCCCAAGATAATAATAGCTGTAAATTGCTACAACATATTTCTGAAACTTGTACATATGACCCAGAGGTATCTCAACTGTGTAGTCAGCTCCAACAGCTTCTAAGTGATCCAGTTGACAAAACAACGTACTCACAAAATTCACGAGATCAACAACTAAAACTGCTGTCCCAAATGTCAGATCTGTGTATTCAGCTGCATGAACGTTTGAAAAATACTGGAAACAAGTAG 2205 0.4349 MDGKPNPDSSSPDFLRHVQAALKRHRPLGSMQSNSIRPRRTLLPQRNLSNTPSDPTNSQEQASSKVSLNTVVPSQNLDVQKKVQFSVHTNSTAQEMEWVEGNQIEASSSSSSLLGCNQKEDVQQAGFDASLRCDSGVSSLLPKRSVVTQDHLQQFSSFLSQPATQSSVLGPSFATTTSVHSASAPMLNSTTRYSHSHLDGGSNLTAEPFGEVNANPRPVTEGGVVKSENVFQKETNRMLVDRGAEAEVQASCLGVGDADLTSKESHRSTEQQGGVLKESGNSKYTWDDGKGKEAVDVATIQPQALLPTSTITSSDVKLESSKVEKREKIASSKGASAPRKRTYDPDLFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCRIYALKKIKLKGRDYATAFGFCQEIEYLNRLKGKDNIIQLIDYEVTDKALLEEVMKGSLSNKDGRVKDDGCIYMVLEYGEIDLAHMLSQKWKELDRSHRTIDENWLRFYWQQILLAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMNDTTNIQRDSQVGTLSYMSPEAFMCNETDGNGNIIKCGRSSDIWSLGCILYQMVYGRTPFSDYKTFWAKFKVITDPNHEITYEPVSNPWLLDLMMRCLTWDRNQRWRIPQLLEHPFLVPPIPSHPSLPQDNNSCKLLQHISETCTYDPEVSQLCSQLQQLLSDPVDKTTYSQNSRDQQLKLLSQMSDLCIQLHERLKNTGNK 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02470 734 Pfam Protein kinase domain 356 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02470 734 ProSitePatterns Serine/Threonine protein kinases active-site signature. 503 515 IPR008271 GO:0004672|GO:0006468
Viun9g02470 734 Gene3D Phosphorylase Kinase; domain 1 349 436 - -
Viun9g02470 734 PANTHER MIXED LINEAGE PROTEIN KINASE 40 682 - -
Viun9g02470 734 MobiDBLite consensus disorder prediction 28 67 - -
Viun9g02470 734 ProSitePatterns Protein kinases ATP-binding region signature. 362 384 IPR017441 GO:0005524
Viun9g02470 734 ProSiteProfiles Protein kinase domain profile. 356 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02470 734 MobiDBLite consensus disorder prediction 259 285 - -
Viun9g02470 734 FunFam serine/threonine-protein kinase mph1 isoform X2 349 436 - -
Viun9g02470 734 CDD PKc_Mps1 354 649 IPR027084 -
Viun9g02470 734 SMART serkin_6 356 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02470 734 FunFam serine/threonine-protein kinase mph1 isoform X1 470 652 - -
Viun9g02470 734 MobiDBLite consensus disorder prediction 24 67 - -
Viun9g02470 734 Gene3D Transferase(Phosphotransferase) domain 1 469 651 - -
Viun9g02470 734 SUPERFAMILY Protein kinase-like (PK-like) 350 659 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02470 Viun-Chr9 33901463 33905004 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02470 362 650 MAP Kinase Kinase Kinase AT4G08470 28.231 5.23e-25 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Viun9g02470 Pkinase 1.8e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02470 K08866 - gmx:100788990 1194.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02470 9 33901463 33905004 Viun9g02470 9 33901463 33905004 ECH