Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02459 ATGTCTGTTATCCAAAAACACACTCACTCTTTACAAGAACTAAACCCTGAGAAGGAGAGTTGGAATATCCTTTCAAGAATTGTAAGGTTATGGTTTGTTGAAGATTACACAAAAGGAAAAACTCCATTTTCCATGGAAATTGTTCTTCAAGACCAAGAGGGTGTACTAATCCATGCATCTGTTAGACGCACATTGATATACAAATTCCAGTCTGAAATCAAAGAGGACAAGGTTTACAGCATCCAATCTTTCAGTGTTTCATGTAATGGTGGTTCTTATAGAACCACAAAACATGCCTATAAGATCAACTTCCAATTTGGAACCAAGGTTAATATGGTGCAAAGTACCTTAGTTCCGAAAACTACAACTTCATACACCCCTTTTTCAACCATCATAGCTGATGGTTTTGACACAGATTACTTAGTTAATGTGATTGGGATGTTTACTGCTGTTGGAACAGAGAGGGAGCTAGAGAAAGCTGGTAAGAAAACCAAAATGAATGTCATCCTTATTGAAGCTGATGGTTTGCAACTGGAGTGTACTTTATTTGGTCAATATGTTGATATGTTAAATGCATTTCTGGCCTCTGGAGAGGATCAACATGTTGTCATTGCTTTGCATTATTGCAAAGTGAAGACCTTCCAAGATAAAGTTTCTATTCAAAACTGTATGAACTGTACCAAGATTATCTTTAACTGTGATGGTGAAGATGCAACCAAGTTGAAAAAAATGATGTGGGATAATACTGAATCTCCTTCTCAAGCTCTTACCCAACTTTCTGCTTCTTCTAAAGTTAGCTTAGAAGATGATTTCATTAAGCTGCATCCTAGGAGTTCAATTGAAGGTCTAAAAGATTTTAAGCAGGTCAAATATTTGTCTCTATGTTCCACATAA 894 0.3624 MSVIQKHTHSLQELNPEKESWNILSRIVRLWFVEDYTKGKTPFSMEIVLQDQEGVLIHASVRRTLIYKFQSEIKEDKVYSIQSFSVSCNGGSYRTTKHAYKINFQFGTKVNMVQSTLVPKTTTSYTPFSTIIADGFDTDYLVNVIGMFTAVGTERELEKAGKKTKMNVILIEADGLQLECTLFGQYVDMLNAFLASGEDQHVVIALHYCKVKTFQDKVSIQNCMNCTKIIFNCDGEDATKLKKMMWDNTESPSQALTQLSASSKVSLEDDFIKLHPRSSIEGLKDFKQVKYLSLCST 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02459 297 CDD RPA1_DBD_A_like 26 110 - -
Viun9g02459 297 Gene3D - 6 112 IPR012340 -
Viun9g02459 297 Pfam Domain of unknown function DUF223 46 141 IPR003871 -
Viun9g02459 297 SUPERFAMILY Nucleic acid-binding proteins 8 112 IPR012340 -
Viun9g02459 297 CDD RPA1_DBD_B_like 143 237 - -
Viun9g02459 297 SUPERFAMILY Nucleic acid-binding proteins 124 246 IPR012340 -
Viun9g02459 297 Gene3D - 118 254 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02459 Viun-Chr9 33838505 33839869 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02459 3 261 Core DNA Replication Machinery Family AT5G08020 22.097 4.54e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02459 - - vun:114163676 595.89