Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02446 ATGGAAATAGACATGGACCCAGACATGGATGTAATCCACAACCTCCACTTCTCTCGACACACCACCCCCTCTTCCGACGACGACTACGGTTGCAACTGGAACCACTGGTCCCCCCTCGTCAACTGGGACGCCTTCACCGGATCCCACGATGACTTCCACAACCTTATCGACTCTATCGTCTCCGACGGTCCCGCCGAGTATCCCAGCCCTGACGACCACGCCGCCAGTAACTCCCCCTCGGCCTCTATAACGGAGCAAGACGACGAGGATGAAGAAACAGCTGCCGCCGACGATTCTAAGGGCCTAAGACTGGTCCATCTGCTCATGGCCGCCGCGGAGGCCCTCACCGGCACCACCAAGAGTCGCGAACTGGCTCGAGTGATATTGGTTCGGCTCAAGGATTTGGTGTCCCACGCCTCGCACGGCTCCAACATGGAGAGGCTCGCCGCCTACTTCACCGACGCACTCCGGGGCCTGCTAGAAGGCGCCGGGGGTGCGCACAATCACAGCAAACATCACTACAACATCACATATGGGTCCCACCACCCCCGCGACGATCATCATCATCATCATCATCAAAACGACACCCTCGCGGCGTTCCAACTGCTCCAGGACATGTCTCCTTACGTCAAGTTCGGACACTTCACCGCCAACCAGGCCATCCTCGAGACCGTGGCCCACGAGCGCCGAGTCCACATCGTAGACTACGACATCATGGAAGGGGTCCAGTGGGCTTCTCTCATGCAGGCCCTTGCCTCCGACAAAACAGGTCCACCGGGCCCACACCTCCGAATCACAGCATTGTCCCGAACCGGCACCGGACGCCGCTCCATCACCACCGTGCAGGAGACCGGGAGGCGGTTGACGGCGTTCGCCGCATCCCTTGGGCAGCCTTTCACGTTCCACCAGTGCAGGTTGGATCCCGACGAAACGTTTAAACCTTCGTCTCTGAAGTTGGTTCGCGGAGAGGCTTTGGTTTTGAACTGCATGTTAAACTTACCGCACCTGAGTTACCGCACGCCCGATTCGATTGCGTCGTTTTTGAGTGGAGCGAAAGAGTTGAAGCCGAGGCTGGTGACTTTGGTGGAGGAAGAGGTGGGGTCCAGTGTGGGAGGGTTCGTTGGAAGGTTCATGGACTCGCTGCATCACTATTCGGCGGTGTTTGACTCGCTGGAGGCTGGGTTTCCGATGCAGGGGCGGGCCAGGGCCCTTGTAGAGCGGGTTTTCTTAGGCCCAAGGATAGTGGGGTCTCTGGCCCGGGTATATCGGACTGGTGAAGAGGTGGAGGAGAGAGGGTCGTGGGGGGAGTGGTTGGGTGCGGCAGGGTTGAGGGGAGTTCCGATGAGCTTCGCCAATCATTGCCAAGCGAAGCTTCTATTGGGTCTTTTCAACGACGGATATCGGGTAGAGGAGTTGGGGGCTAATAAGTTGGTGTTGGATTGGAAATCTCGGCGCTTGCTTTCTGCCTCCCTCTGGACTTCTTCTTCTTCTTCTTCTGACTCTCATTAA 1509 0.5792 MEIDMDPDMDVIHNLHFSRHTTPSSDDDYGCNWNHWSPLVNWDAFTGSHDDFHNLIDSIVSDGPAEYPSPDDHAASNSPSASITEQDDEDEETAAADDSKGLRLVHLLMAAAEALTGTTKSRELARVILVRLKDLVSHASHGSNMERLAAYFTDALRGLLEGAGGAHNHSKHHYNITYGSHHPRDDHHHHHHQNDTLAAFQLLQDMSPYVKFGHFTANQAILETVAHERRVHIVDYDIMEGVQWASLMQALASDKTGPPGPHLRITALSRTGTGRRSITTVQETGRRLTAFAASLGQPFTFHQCRLDPDETFKPSSLKLVRGEALVLNCMLNLPHLSYRTPDSIASFLSGAKELKPRLVTLVEEEVGSSVGGFVGRFMDSLHHYSAVFDSLEAGFPMQGRARALVERVFLGPRIVGSLARVYRTGEEVEERGSWGEWLGAAGLRGVPMSFANHCQAKLLLGLFNDGYRVEELGANKLVLDWKSRRLLSASLWTSSSSSSDSH 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02446 502 ProSiteProfiles GRAS family profile. 95 493 IPR005202 -
Viun9g02446 502 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 88 488 IPR005202 -
Viun9g02446 502 MobiDBLite consensus disorder prediction 171 193 - -
Viun9g02446 502 MobiDBLite consensus disorder prediction 62 97 - -
Viun9g02446 502 MobiDBLite consensus disorder prediction 178 193 - -
Viun9g02446 502 Pfam GRAS domain family 104 493 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02446 Viun-Chr9 33743824 33746249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02446 63 492 GRAS Transcription Factor Family AT1G66350 34.247 3.41e-55 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Viun9g02446 GRAS 2.2e-99 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02446 - - gmx:100787926 764.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02446 9 33743824 33746249 Viun9g02446 9 33743824 33746249 ECH