Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02432 ATGGTTAAGTCAGAGCACAAGATCAAAACAGAACCACCATCGAAGGCAATGCGGTCTATATTATCAGCATCATCACCGGCACCAGCAGCATCAGATAGCAAGAAGAAGAAGTACAAGGGAGTGAGAATGAGGAGCTGGGGGTCTTGGGTTTCAGAGATCAGAGCACCGAACCAGAAAACAAGAATATGGTTAGGGTCTTATTCAACCCCAGAGGCTGCAGCTAGAGCCTATGATGCTGCACTTCTGTGCTTAAAAGGTTCCTCTGCTAATTTTAATTTCCCTTTAAGCTCTTCACAATATATTCCCGGAGATGCTGTCATGTCCCCGAAATCAATCCAAAGAGTTGCTGCAGCTGCTGCAAATAGTTTCATTGACAATGCCACCATTCCCGCTTCTGCATCTCCAGCTTCAACCTCATCATCATCGTTGGTCTCATCCCCCTCAATGGCCTATTCTCCTTCGGATCAAGTCGATGATGATGCCTCACTGATATCGTCTCTGGAAGCAGCCTACACTACTCGTGATCAAGCAAATGAATCAATGGCTATGAATGTGATGGAGCCTTGGTACACTTTAGATGATCTTCAATCCCCCAAGTATGTTGATCAGATGTTAAGTGGTGCTTTCTTTGATGTTGATTCGTCCCATCTGCTCGATGATCTATTCGAAGAAAGCGACATCCGTTTGTGGAGCTTCTGCTGA 702 0.4544 MVKSEHKIKTEPPSKAMRSILSASSPAPAASDSKKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTPEAAARAYDAALLCLKGSSANFNFPLSSSQYIPGDAVMSPKSIQRVAAAAANSFIDNATIPASASPASTSSSSLVSSPSMAYSPSDQVDDDASLISSLEAAYTTRDQANESMAMNVMEPWYTLDDLQSPKYVDQMLSGAFFDVDSSHLLDDLFEESDIRLWSFC 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02432 233 ProSiteProfiles AP2/ERF domain profile. 37 94 IPR001471 GO:0003700|GO:0006355
Viun9g02432 233 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 24 168 - -
Viun9g02432 233 PRINTS Ethylene responsive element binding protein signature 38 49 IPR001471 GO:0003700|GO:0006355
Viun9g02432 233 PRINTS Ethylene responsive element binding protein signature 60 76 IPR001471 GO:0003700|GO:0006355
Viun9g02432 233 Pfam AP2 domain 37 86 IPR001471 GO:0003700|GO:0006355
Viun9g02432 233 FunFam ethylene-responsive transcription factor ERF014-like 36 96 - -
Viun9g02432 233 SMART rav1_2 37 100 IPR001471 GO:0003700|GO:0006355
Viun9g02432 233 CDD AP2 36 96 IPR001471 GO:0003700|GO:0006355
Viun9g02432 233 MobiDBLite consensus disorder prediction 1 39 - -
Viun9g02432 233 MobiDBLite consensus disorder prediction 131 157 - -
Viun9g02432 233 Gene3D AP2/ERF domain 36 96 IPR036955 GO:0003700|GO:0006355
Viun9g02432 233 SUPERFAMILY DNA-binding domain 37 96 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02432 Viun-Chr9 33638051 33639212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02432 1 232 AP2-EREBP Transcription Factor Family AT1G21910 45.882 7.72e-48 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Viun9g02432 AP2 3.1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02432 - - pvu:PHAVU_009G123300g 361.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02432 9 33638051 33639212 Viun9g02432 9 33638051 33639212 ECH