Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02409 ATGGAGGACCAAAATGGTGGTGGAAAGATGAGCCAAGGGCTTCGCAAGTTGAAGCCTTACCTTGCTATATTGTCCCTTCAGTTCGGTTACTCAGGGATGTATATCATCACCATGGTTTCTTTCAAGCATGGCATGAGTCATTGGATACTCTCAGTGTACCGTCACGTAGTTGCCGCCATTATCATAGTCCCTTTTGCTCTTGTCCTTGAAAGAAAAATAAGACCAAAGATGACTCTTCCCATCTTCCTCAGGATAGTGGCACTTGGTTTCCTTGAGCCAGTGCTAGATCAGAACTTGTACAACATGGGAATGAAAATGACTTCAACAACGTTTGCATCCGCCACAGTTAATGTCCTCCCGGCCATTACTTTTATTATGGCTCTCATTTTCAGGCTGGAGAAGGTGAACCTGAGAAAATTTCACAGCCTAGCGAAGGTCATCGGAACGGTAATAACAGTTTCGGGAGCTATGGTTATGACTCTGTACAAAGGCCCTGCCTTTCAAATAATAAAGGGTGGAGGAGCCATCGGCAACCACCACAACTCTAGCAGTAGCACCACTGAACCCTCTGATCAACACTGGGTGGTTGGCACAGTCATGCTCATATCAAGTTGTGCCAGTTGGGCTGGTTTCTTCATTTTGCAATCATTCACTTTGAAGAAGTACCCAGCGGAGCTCTCACTCACGGCATGGATTTGCGTAATGGGAATCATTGAGGGTTCAATCGCATCCCTTATATTTGAACGAGACTTTAGTGTATGGGTCATAGGGTGGGATTCGAGGCTTCTCGCTTGTGTGTATTCTGGGGTGATTTGTTCTGGAATGGCATACTATGTACAAGGGGTTGTAACCAGGGAACGTGGACCGGTGTTTGTGACATCTTTCAGCCCTCTATGTATGATAATCACCGCTGCATTGGGTTCCCTTGTTTTAGCCGAACAAGTTCATCTCGGAAGTATATTTGGGGCTATTCTGATCGTGTGTGGACTTTACACTGTGGTGTGGGGCAAAAGCAAAGACCGTGTGAACGCAACAGAAACAGGGAAAGAAGGAAGCCAAGAATTGCCAATGAAGGACAGTACAAAATCAGCGTCAGACAAGTTTTATGGGCTTGAGATCAATGTTTCAGATGAGGTGTTGAGGAAAGGTGTCCCACCAACAACGTTATCATGA 1173 0.4569 MEDQNGGGKMSQGLRKLKPYLAILSLQFGYSGMYIITMVSFKHGMSHWILSVYRHVVAAIIIVPFALVLERKIRPKMTLPIFLRIVALGFLEPVLDQNLYNMGMKMTSTTFASATVNVLPAITFIMALIFRLEKVNLRKFHSLAKVIGTVITVSGAMVMTLYKGPAFQIIKGGGAIGNHHNSSSSTTEPSDQHWVVGTVMLISSCASWAGFFILQSFTLKKYPAELSLTAWICVMGIIEGSIASLIFERDFSVWVIGWDSRLLACVYSGVICSGMAYYVQGVVTRERGPVFVTSFSPLCMIITAALGSLVLAEQVHLGSIFGAILIVCGLYTVVWGKSKDRVNATETGKEGSQELPMKDSTKSASDKFYGLEINVSDEVLRKGVPPTTLS 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02409 390 Pfam EamA-like transporter family 197 334 IPR000620 GO:0016020
Viun9g02409 390 Pfam EamA-like transporter family 28 152 IPR000620 GO:0016020
Viun9g02409 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 254 339 - -
Viun9g02409 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 161 - -
Viun9g02409 390 PANTHER WAT1-RELATED PROTEIN 19 347 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02409 Viun-Chr9 33481417 33484821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02409 7 374 Nodulin-like Gene Family AT4G08300 66.576 2.38e-176 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02409 - - gmx:100783910 703.745