Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02404 ATGGAGTCCACCGTCATGGACTGCAGTCCTTCCTCCAGTGCCGCCCCGCCCCGCCGCAGTGGTCGCAAGAAGCTGGTTCAATCGACGCTCTTCCCTCTCAAGCCACCGGAGCCCGTTGAGAAGAAGGACAAAGAGGACGAAGTCGACGAGGATTACTCTGAGGCTGAGAATAACAAGAAGAAGAGGAAGAGGTCCAAGGCAAAAGCCACTCCTCCGAAAAAAGTTTCATCTAAGCAGCGTCCAACGCCAAGGAAAAAAGCAACTGCTAATGGCACTAAGGGGTCAACTTCGCAGCAGGTGTTGACTAATTCCGATCAGGTTAAGGCACCTGTGTATGATTTGTTTCTAGAAGCAAAATTGGCTGCTGAGGAAGATTCGAGGATATATGCGGGACGTCAGATACATCCGTTTTTTTCATTATGGAAAGAAGGAAAAAAAGTTCAAGATGTGAGTGAGTCAGGAAGTAATTTACCAACAGCTAAGAGTAACCATAAAAGGGCTACTTGCGGCCCTATTCATGTATTTGAAAATGTTAAGGATGATACGTTATCCGTTGACTGGAGAAACTGGACGTTTGTGGAGAATATGATCTCTGTGAACTATGGTCAAGAGAGTGTAAATGCATCTGTTTTAGAGGGATCGGTTGAATCCTTAAACTTTGATAAGCTTCACAGTTCTTTGAATCGATTAGGCATTTCAATTTCTCAGAATGCCTTATCTTCAGACAGACTTTCTATAATTCGGAAAAAACCGGAAGAAGTATCACCATCAAACCCATCTTCACTAGTAGAGCAATCAGCATGTCTGACGTGTGAAAATGCTGAACTGGACATGAAGGTGGATGAATCTGTTACTACAACTGTGCAAGCTGGCATTTTTAGAAAGTCTAAAGATACCGAACCACTGAGTAGATTTCTTCAAGAAAGTATGAGATCATACTACCGTAGCTGTTTAGATATGGAGGAGTGCAACTTATGGACAAACAAATACAAGCCAACGAAGGCTGTTGAGGTATGTGGTAATGATGAATCTGTTAATTTCTTGAGTGACTGGCTACATCGTTGGCATGAAAGGCAGTATAAAAGCAGGAAGGATAACACTGGCACTAATAAAAGTGGCATGCAAGATGTTGAAGATGACGACGACGATTATAAATATTCTTATAGTGACTGTGATTCAGAAGATATAAATGAGAAGGATTCCCTGCCAAAAGTTCTTTTAATTACAGGTCCAATTGGGAGTGGCAAGTCTTCAGCAGTCCATGCTTGTGCCAAAGAGCAAGGGTTTATTATTTTAGAGATCAATTCATCAAATTCTACAAATGGGACTGCTATCAGGAACTTGGAACATTCTCTTGATTCACTTGGGTTCAAAAGGCAATCAGGAAACTCTGAAAGTTCACATAAGACCTCTACAAAATCGGCCCGAGCTCTGGCTATGCTCAGTGGTAAAGCTGCTGATGAAGCAAATGGAGTGGATGAACTGGTAACCATATCCGATGATGAAACTTGTACCCATAGTGGATCAACTTTAAAGTTACATGGGGAAAATGATGATACTGAAAAATATAAAATCCGTCGACTAGTTCTAGTTGAGGATGTGGACATCCTTTTTGCTGAAGATCGTGGATGTATGGCCGCCATACAACGGATTGCTGAGACATCAAAGGGGCCAATTATATTGACCAGTAATAGTGATAATCCTGGTCTGCCACATAAGTTTGACATGCTCCATGTTCCATTCGTGTTGCCATCACCAAAGGAATTGCTTTGCCATTTGTACAGTGTTTGTCTCGCTGAAGGAGTCAACATCCATCCTCTTTTACTAGAGAAGTTTATACATTCTTGTGATGGAGATATCCGAAAAAGCATTATGCATCTTCAATTCTGGTTTCAGAGTAAAACGTTTCAAAAAGATGAAAAGGCACAAACAGGTTATGGCTCACGTCCATTTGATCTTGAGCTTGGCCATCAGATTCTTCCGAAGATAATGCCCTGGGATTTCCCCTCAGTGATATCCGATCTAATTGAAAACGAAATTGCCAAACAAACAAATATAATGGAAGAAAACTCCAAAGGGTTGATTACCGAAAAGCTTAATGTAAGTGAACAGCAAAAAGATTTAAATGTGAATTATATAGGGACTGATGATATAGAGGCCATGAAGGTGGAGATGATTAATAGGAATGGATCGTTGACGGATTACTGTGAGCTTGAAATTCAACGTAGCACTATTTCCGAGTTTTCCAATTCTTCTGGTTCCCCTCTTGCATCTTCTAGGCATAATGGTCGAAGGAAACATGTAGTCATGTCTGATGACGAAGATTCAAATTGTGGATATCCTGTAGACTCCCACGATGAAGCTAATATGAGGCAACTGATGAAAGAAACTAATGGTTGTCCATCAGAATTTCAATTAAATGGAAACTACCCGGGCACATCAGTTGACAGACTAGTTTGTTCCGATTTGGAGCACTCAGAGGCTGATAGTGCATACTTGAATGAAACATGTAAATCATTTGATGTATCATGTGTGCCAGAATCAACGTATGTTCCTGAAACTGAAATTGAAAATGGAACAGAGACATTGTCTGGAGCCGTGTCTTCTGGTCCTGCTCTCCCTTTTGTTAGTCTTCGAGAAGTATCTGTGAATAATGAGTTGAAACCATTCAATTTCAATGTTCGTAGGCGCTTAACAAAATTGTTACAGAATCCAGATTTGTTGGCGGATACTGAAATTCCAGATCATTCTTTTCAAGGGGTTCAGCCTAATGTTCTAGATGAACATACGGAAACAATTGTTAAAGTGATGGATGAATGCAGTCGAATGGATTTCAAACCAAAACCAACATTGTCGCAGTCCAATCCATTAGACGAGACAGAAAAGATACAAAACGTGTGGAGAGATCTCCGTGATCACCGAGTGGATTTAAGACAGCATTCTATCTCAGAAGAGCTTGGTGCTTTTCAAGTTGTTAAACTTGCTAGTGGACTGTGCAATCTAATTTCAGATGTTGACTTGTTTCCTTACTTGGATAAAATGGAACCTTCAATGTTCCTTTCTAATGAAGCCGCATCAAATGGGTATTGTGAACAAATGATGTCCACGGTGGCTGAGCATGGGTTTTGCTTTTACGCTAAGGTTATAGCAGATGAAGGATCAAAGTTGGGTTGTGCAAATTGTGTTGATATTACTTCTGAGATGTTGGCTTCCTCCACTGATATTATGGCTTTGGGGAAATTATCCCGACAGGATCTCTCGAAAATGAAAGCTTTCCGTACTGGAAATGAAGTAGAGTGGAACACCCCAATAAATAATATGCAGAAGAGTGAAAAGAAAAGATCTCTAATCGAGGTCATCCAATCCATTGCTCCTGCAAGAACATCCTTGGCAATGAAAGGTTATGCATTCAACGAATATCTATCTTCATTACGCCAAATTTCAAGGTCTGAAGCTTTCCGTATTTCACAAGTGGTCGAAAAGAAGAGAGGAGGAAGGGTACGGGGCGTTCACCATTACTTGAGCACAAATACCGAGTTGTCTCCAGAAGATATATCTTTGGTGACCGATGGTGATCCATACAGAAAAATTTCTTCCCAACATACAACATAG 3612 0.4086 MESTVMDCSPSSSAAPPRRSGRKKLVQSTLFPLKPPEPVEKKDKEDEVDEDYSEAENNKKKRKRSKAKATPPKKVSSKQRPTPRKKATANGTKGSTSQQVLTNSDQVKAPVYDLFLEAKLAAEEDSRIYAGRQIHPFFSLWKEGKKVQDVSESGSNLPTAKSNHKRATCGPIHVFENVKDDTLSVDWRNWTFVENMISVNYGQESVNASVLEGSVESLNFDKLHSSLNRLGISISQNALSSDRLSIIRKKPEEVSPSNPSSLVEQSACLTCENAELDMKVDESVTTTVQAGIFRKSKDTEPLSRFLQESMRSYYRSCLDMEECNLWTNKYKPTKAVEVCGNDESVNFLSDWLHRWHERQYKSRKDNTGTNKSGMQDVEDDDDDYKYSYSDCDSEDINEKDSLPKVLLITGPIGSGKSSAVHACAKEQGFIILEINSSNSTNGTAIRNLEHSLDSLGFKRQSGNSESSHKTSTKSARALAMLSGKAADEANGVDELVTISDDETCTHSGSTLKLHGENDDTEKYKIRRLVLVEDVDILFAEDRGCMAAIQRIAETSKGPIILTSNSDNPGLPHKFDMLHVPFVLPSPKELLCHLYSVCLAEGVNIHPLLLEKFIHSCDGDIRKSIMHLQFWFQSKTFQKDEKAQTGYGSRPFDLELGHQILPKIMPWDFPSVISDLIENEIAKQTNIMEENSKGLITEKLNVSEQQKDLNVNYIGTDDIEAMKVEMINRNGSLTDYCELEIQRSTISEFSNSSGSPLASSRHNGRRKHVVMSDDEDSNCGYPVDSHDEANMRQLMKETNGCPSEFQLNGNYPGTSVDRLVCSDLEHSEADSAYLNETCKSFDVSCVPESTYVPETEIENGTETLSGAVSSGPALPFVSLREVSVNNELKPFNFNVRRRLTKLLQNPDLLADTEIPDHSFQGVQPNVLDEHTETIVKVMDECSRMDFKPKPTLSQSNPLDETEKIQNVWRDLRDHRVDLRQHSISEELGAFQVVKLASGLCNLISDVDLFPYLDKMEPSMFLSNEAASNGYCEQMMSTVAEHGFCFYAKVIADEGSKLGCANCVDITSEMLASSTDIMALGKLSRQDLSKMKAFRTGNEVEWNTPINNMQKSEKKRSLIEVIQSIAPARTSLAMKGYAFNEYLSSLRQISRSEAFRISQVVEKKRGGRVRGVHHYLSTNTELSPEDISLVTDGDPYRKISSQHTT 1203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02404 1203 MobiDBLite consensus disorder prediction 363 382 - -
Viun9g02404 1203 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 586 647 - -
Viun9g02404 1203 MobiDBLite consensus disorder prediction 1 100 - -
Viun9g02404 1203 MobiDBLite consensus disorder prediction 82 100 - -
Viun9g02404 1203 MobiDBLite consensus disorder prediction 36 60 - -
Viun9g02404 1203 MobiDBLite consensus disorder prediction 61 81 - -
Viun9g02404 1203 MobiDBLite consensus disorder prediction 1 16 - -
Viun9g02404 1203 MobiDBLite consensus disorder prediction 747 778 - -
Viun9g02404 1203 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 11 1200 IPR004582 GO:0006281
Viun9g02404 1203 Gene3D - 324 575 IPR027417 -
Viun9g02404 1203 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 324 632 IPR027417 -
Viun9g02404 1203 Gene3D - 584 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02404 Viun-Chr9 33435051 33445109 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02404 326 629 Core DNA Replication Machinery Family AT5G22010 23.548 1.06e-09 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02404 K26118 - gmx:100784209 1586.62