Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02403 ATGGAGTCCACCGTCATGGACTGCAGTCCTTCCTCCAGTGCCGCCCCGCCCCGCCGCAGTGGTCGCAAGAAGCTGGTTCAATCGACGCTCTTCCCTCTCAAGCCACCGGAGCCCGTTGAGAAGAAGGACAAAGAGGACGAAGTCGACGAGGATTACTCTGAGGCTGAGAATAACAAGAAGAAGAGGAAGAGGTCCAAGGCAAAAGCCACTCCTCCGAAAAAAGTTTCATCTAAGCGTCCAACGCCAAGGAAAAAAGCAACTGCTAATGGCACTAAGGGGTCAACTTCGCAGCAGGTGTTGACTAATTCCGATCAGGTTAAGGCACCTGTGTATGATTTGTTTCTAGAAGCAAAATTGGCTGCTGAGGAAGATTCGAGGATATATGCGGGACGTCAGATACATCCGTTTTTTTCATTATGGAAAGAAGGAAAAAAAGTTCAAGATGTGAGTGAGTCAGGAAGTAATTTACCAACAGCTAAGAGTAACCATAAAAGGGCTACTTGCGGCCCTATTCATGTATTTGAAAATGTTAAGGATGATACGTTATCCGTTGACTGGAGAAACTGGACGTTTGTGGAGAATATGATCTCTGTGAACTATGGTCAAGAGAGTGTAAATGCATCTGTTTTAGAGGGATCGGTTGAATCCTTAAACTTTGATAAGCTTCACAGTTCTTTGAATCGATTAGGCATTTCAATTTCTCAGAATGCCTTATCTTCAGACAGACTTTCTATAATTCGGAAAAAACCGGAAGAAGTATCACCATCAAACCCATCTTCACTAGTAGAGCAATCAGCATGTCTGACGTGTGAAAATGCTGAACTGGACATGAAGGTGGATGAATCTGTTACTACAACTGTGCAAGCTGGCATTTTTAGAAAGTCTAAAGATACCGAACCACTGAGTAGATTTCTTCAAGAAAGTATGAGATCATACTACCGTAGCTGTTTAGATATGGAGGAGTGCAACTTATGGACAAACAAATACAAGCCAACGAAGGCTGTTGAGGTATGTGGTAATGATGAATCTGTTAATTTCTTGAGTGACTGGCTACATCGTTGGCATGAAAGGCAGTATAAAAGCAGGAAGGATAACACTGGCACTAATAAAAGTGGCATGCAAGATGTTGAAGATGACGACGACGATTATAAATATTCTTATAGTGACTGTGATTCAGAAGATATAAATGAGAAGGATTCCCTGCCAAAAGTTCTTTTAATTACAGGTCCAATTGGGAGTGGCAAGTCTTCAGCAGTCCATGCTTGTGCCAAAGAGCAAGGGTTTATTATTTTAGAGATCAATTCATCAAATTCTACAAATGGGACTGCTATCAGGAACTTGGAACATTCTCTTGATTCACTTGGGTTCAAAAGGCAATCAGGAAACTCTGAAAGTTCACATAAGACCTCTACAAAATCGGCCCGAGCTCTGGCTATGCTCAGTGGTAAAGCTGCTGATGAAGCAAATGGAGTGGATGAACTGGTAACCATATCCGATGATGAAACTTGTACCCATAGTGGATCAACTTTAAAGTTACATGGGGAAAATGATGATACTGAAAAATATAAAATCCGTCGACTAGTTCTAGTTGAGGATGTGGACATCCTTTTTGCTGAAGATCGTGGATGTATGGCCGCCATACAACGGATTGCTGAGACATCAAAGGGGCCAATTATATTGACCAGTAATAGTGATAATCCTGGTCTGCCACATAAGTTTGACATGCTCCATGTTCCATTCGTGTTGCCATCACCAAAGGAATTGCTTTGCCATTTGTACAGTGTTTGTCTCGCTGAAGGAGTCAACATCCATCCTCTTTTACTAGAGAAGTTTATACATTCTTGTGATGGAGATATCCGAAAAAGCATTATGCATCTTCAATTCTGGTTTCAGAGTAAAACGTTTCAAAAAGATTTCTCCCGTTGTTGTACAGATGAAAAGGCACAAACAGGTTATGGCTCACGTCCATTTGATCTTGAGCTTGGCCATCAGATTCTTCCGAAGATAATGCCCTGGGATTTCCCCTCAGTGATATCCGATCTAATTGAAAACGAAATTGCCAAACAAACAAATATAATGGAAGAAAACTCCAAAGGGTTGATTACCGAAAAGCTTAATGTAAGTGAACAGCAAAAAGATTTAAATGTGAATTATATAGGGACTGATGATATAGAGGCCATGAAGGTGGAGATGATTAATAGGAATGGATCGTTGACGGATTACTGTGAGCTTGAAATTCAACGTAGCACTATTTCCGAGTTTTCCAATTCTTCTGGTTCCCCTCTTGCATCTTCTAGGCATAATGGTCGAAGGAAACATGTAGTCATGTCTGATGACGAAGATTCAAATTGTGGATATCCTGTAGACTCCCACGATGAAGCTAATATGAGGCAACTGATGAAAGAAACTAATGGTTGTCCATCAGAATTTCAATTAAATGGAAACTACCCGGGCACATCAGTTGACAGACTAGTTTGTTCCGATTTGGAGCACTCAGAGGCTGATAGTGCATACTTGAATGAAACATGTAAATCATTTGATGTATCATGTGTGCCAGAATCAACGTATGTTCCTGAAACTGAAATTGAAAATGGAACAGAGACATTGTCTGGAGCCGTGTCTTCTGGTCCTGCTCTCCCTTTTGTTAGTCTTCGAGAAGTATCTGTGAATAATGAGTTGAAACCATTCAATTTCAATGTTCGTAGGCGCTTAACAAAATTGTTACAGAATCCAGATTTGTTGGCGGATACTGAAATTCCAGATCATTCTTTTCAAGGGGTTCAGCCTAATGTTCTAGATGAACATACGGAAACAATTGTTAAAGTGATGGATGAATGCAGTCGAATGGATTTCAAACCAAAACCAACATTGTCGCAGTCCAATCCATTAGACGAGACAGAAAAGATACAAAACGTGTGGAGAGATCTCCGTGATCACCGAGTGGATTTAAGACAGCATTCTATCTCAGAAGAGCTTGGTGCTTTTCAAGTTGTTAAACTTGCTAGTGGACTGTGCAATCTAATTTCAGATGTTGACTTGTTTCCTTACTTGGATAAAATGGAACCTTCAATGTTCCTTTCTAATGAAGCCGCATCAAATGGGTATTGTGAACAAATGATGTCCACGGTGGCTGAGCATGGGTTTTGCTTTTACGCTAAGGTTATAGCAGATGAAGGATCAAAGTTGGGTTGTGCAAATTGTGTTGATATTACTTCTGAGATGTTGGCTTCCTCCACTGATATTATGGCTTTGGGGAAATTATCCCGACAGGATCTCTCGAAAATGAAAGCTTTCCGTACTGGAAATGAAGTAGAGTGGAACACCCCAATAAATAATATGCAGAAGAGTGAAAAGAAAAGATCTCTAATCGAGGTCATCCAATCCATTGCTCCTGCAAGAACATCCTTGGCAATGAAAGGTTATGCATTCAACGAATATCTATCTTCATTACGCCAAATTTCAAGGTCTGAAGCTTTCCGTATTTCACAAGTGGTCGAAAAGAAGAGAGGAGGAAGGGTACGGGGCGTTCACCATTACTTGAGCACAAATACCGAGTTGTCTCCAGAAGATATATCTTTGGTGACCGATGGTGATCCATACAGAAAAATTTCTTCCCAACATACAACATAG 3630 0.4085 MESTVMDCSPSSSAAPPRRSGRKKLVQSTLFPLKPPEPVEKKDKEDEVDEDYSEAENNKKKRKRSKAKATPPKKVSSKRPTPRKKATANGTKGSTSQQVLTNSDQVKAPVYDLFLEAKLAAEEDSRIYAGRQIHPFFSLWKEGKKVQDVSESGSNLPTAKSNHKRATCGPIHVFENVKDDTLSVDWRNWTFVENMISVNYGQESVNASVLEGSVESLNFDKLHSSLNRLGISISQNALSSDRLSIIRKKPEEVSPSNPSSLVEQSACLTCENAELDMKVDESVTTTVQAGIFRKSKDTEPLSRFLQESMRSYYRSCLDMEECNLWTNKYKPTKAVEVCGNDESVNFLSDWLHRWHERQYKSRKDNTGTNKSGMQDVEDDDDDYKYSYSDCDSEDINEKDSLPKVLLITGPIGSGKSSAVHACAKEQGFIILEINSSNSTNGTAIRNLEHSLDSLGFKRQSGNSESSHKTSTKSARALAMLSGKAADEANGVDELVTISDDETCTHSGSTLKLHGENDDTEKYKIRRLVLVEDVDILFAEDRGCMAAIQRIAETSKGPIILTSNSDNPGLPHKFDMLHVPFVLPSPKELLCHLYSVCLAEGVNIHPLLLEKFIHSCDGDIRKSIMHLQFWFQSKTFQKDFSRCCTDEKAQTGYGSRPFDLELGHQILPKIMPWDFPSVISDLIENEIAKQTNIMEENSKGLITEKLNVSEQQKDLNVNYIGTDDIEAMKVEMINRNGSLTDYCELEIQRSTISEFSNSSGSPLASSRHNGRRKHVVMSDDEDSNCGYPVDSHDEANMRQLMKETNGCPSEFQLNGNYPGTSVDRLVCSDLEHSEADSAYLNETCKSFDVSCVPESTYVPETEIENGTETLSGAVSSGPALPFVSLREVSVNNELKPFNFNVRRRLTKLLQNPDLLADTEIPDHSFQGVQPNVLDEHTETIVKVMDECSRMDFKPKPTLSQSNPLDETEKIQNVWRDLRDHRVDLRQHSISEELGAFQVVKLASGLCNLISDVDLFPYLDKMEPSMFLSNEAASNGYCEQMMSTVAEHGFCFYAKVIADEGSKLGCANCVDITSEMLASSTDIMALGKLSRQDLSKMKAFRTGNEVEWNTPINNMQKSEKKRSLIEVIQSIAPARTSLAMKGYAFNEYLSSLRQISRSEAFRISQVVEKKRGGRVRGVHHYLSTNTELSPEDISLVTDGDPYRKISSQHTT 1209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02403 1209 Gene3D - 583 648 - -
Viun9g02403 1209 MobiDBLite consensus disorder prediction 36 60 - -
Viun9g02403 1209 MobiDBLite consensus disorder prediction 82 99 - -
Viun9g02403 1209 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 11 1206 IPR004582 GO:0006281
Viun9g02403 1209 MobiDBLite consensus disorder prediction 61 81 - -
Viun9g02403 1209 MobiDBLite consensus disorder prediction 753 784 - -
Viun9g02403 1209 MobiDBLite consensus disorder prediction 1 16 - -
Viun9g02403 1209 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 585 646 - -
Viun9g02403 1209 MobiDBLite consensus disorder prediction 362 381 - -
Viun9g02403 1209 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 323 631 IPR027417 -
Viun9g02403 1209 MobiDBLite consensus disorder prediction 1 99 - -
Viun9g02403 1209 Gene3D - 323 574 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02403 Viun-Chr9 33435051 33445109 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02403 325 628 Core DNA Replication Machinery Family AT5G22010 23.548 9.51e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02403 K26118 - gmx:100784209 1582