Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02400 ATGGAGTCCACCGTCATGGACTGCAGTCCTTCCTCCAGTGCCGCCCCGCCCCGCCGCAGTGGTCGCAAGAAGCTGGTTCAATCGACGCTCTTCCCTCTCAAGCCACCGGAGCCCGTTGAGAAGAAGGACAAAGAGGACGAAGTCGACGAGGATTACTCTGAGGCTGAGAATAACAAGAAGAAGAGGAAGAGGTCCAAGGCAAAAGCCACTCCTCCGAAAAAAGTTTCATCTAAGCAGCGTCCAACGCCAAGGAAAAAAGCAACTGCTAATGGCACTAAGGGGTCAACTTCGCAGCAGGTGTTGACTAATTCCGATCAGGTTAAGGCACCTGTGTATGATTTGTTTCTAGAAGCAAAATTGGCTGCTGAGGAAGATTCGAGGATATATGCGGGACGTCAGATACATCCGTTTTTTTCATTATGGAAAGAAGGAAAAAAAGTTCAAGATGTGAGTGAGTCAGGAAGTAATTTACCAACAGCTAAGAGTAACCATAAAAGGGCTACTTGCGGCCCTATTCATGTATTTGAAAATGTTAAGGATGATACGTTATCCGTTGACTGGAGAAACTGGACGTTTGTGGAGAATATGATCTCTGTGAACTATGGTCAAGAGAGTGTAAATGCATCTGTTTTAGAGGGATCGGTTGAATCCTTAAACTTTGATAAGCTTCACAGTTCTTTGAATCGATTAGGCATTTCAATTTCTCAGAATGCCTTATCTTCAGACAGACTTTCTATAATTCGGAAAAAACCGGAAGAAGTATCACCATCAAACCCATCTTCACTAGTAGAGCAATCAGCATGTCTGACGTGTGAAAATGCTGAACTGGACATGAAGGTGGATGAATCTGTTACTACAACTGTGCAAGCTGGCATTTTTAGAAAGTCTAAAGATACCGAACCACTGAGTAGATTTCTTCAAGAAAGTATGAGATCATACTACCGTAGCTGTTTAGATATGGAGGAGTGCAACTTATGGACAAACAAATACAAGCCAACGAAGGCTGTTGAGGTATGTGGTAATGATGAATCTGTTAATTTCTTGAGTGACTGGCTACATCGTTGGCATGAAAGGCAGTATAAAAGCAGGAAGGATAACACTGGCACTAATAAAAGTGGCATGCAAGATGTTGAAGATGACGACGACGATTATAAATATTCTTATAGTGACTGTGATTCAGAAGATATAAATGAGAAGGATTCCCTGCCAAAAGTTCTTTTAATTACAGGTCCAATTGGGAGTGGCAAGTCTTCAGCAGTCCATGCTTGTGCCAAAGAGCAAGGGTTTATTATTTTAGAGATCAATTCATCAAATTCTACAAATGGGACTGCTATCAGGAACTTGGAACATTCTCTTGATTCACTTGGGTTCAAAAGGCAATCAGGAAACTCTGAAAGTTCACATAAGACCTCTACAAAATCGGCCCGAGCTCTGGCTATGCTCAGTGGTAAAGCTGCTGATGAAGCAAATGGAGTGGATGAACTGGTAACCATATCCGATGATGAAACTTGTACCCATAGTGGATCAACTTTAAAGTTACATGGGGAAAATGATGATACTGAAAAATATAAAATCCGTCGACTAGTTCTAGTTGAGGATGTGGACATCCTTTTTGCTGAAGATCGTGGATGTATGGCCGCCATACAACGGATTGCTGAGACATCAAAGGGGCCAATTATATTGACCAGTGATAATCCTGGTCTGCCACATAAGTTTGACATGCTCCATGTTCCATTCGTGTTGCCATCACCAAAGGAATTGCTTTGCCATTTGTACAGTGTTTGTCTCGCTGAAGGAGTCAACATCCATCCTCTTTTACTAGAGAAGTTTATACATTCTTGTGATGGAGATATCCGAAAAAGCATTATGCATCTTCAATTCTGGTTTCAGAGTAAAACGTTTCAAAAAGATGAAAAGGCACAAACAGGTTATGGCTCACGTCCATTTGATCTTGAGCTTGGCCATCAGATTCTTCCGAAGATAATGCCCTGGGATTTCCCCTCAGTGATATCCGATCTAATTGAAAACGAAATTGCCAAACAAACAAATATAATGGAAGAAAACTCCAAAGGGTTGATTACCGAAAAGCTTAATGTAAGTGAACAGCAAAAAGATTTAAATGTGAATTATATAGGGACTGATGATATAGAGGCCATGAAGGTGGAGATGATTAATAGGAATGGATCGTTGACGGATTACTGTGAGCTTGAAATTCAACGTAGCACTATTTCCGAGTTTTCCAATTCTTCTGGTTCCCCTCTTGCATCTTCTAGGCATAATGGTCGAAGGAAACATGTAGTCATGTCTGATGACGAAGATTCAAATTGTGGATATCCTGTAGACTCCCACGATGAAGCTAATATGAGGCAACTGATGAAAGAAACTAATGGTTGTCCATCAGAATTTCAATTAAATGGAAACTACCCGGGCACATCAGTTGACAGACTAGTTTGTTCCGATTTGGAGCACTCAGAGGCTGATAGTGCATACTTGAATGAAACATGTAAATCATTTGATGTATCATGTGTGCCAGAATCAACGTATGTTCCTGAAACTGAAATTGAAAATGGAACAGAGACATTGTCTGGAGCCGTGTCTTCTGGTCCTGCTCTCCCTTTTGTTAGTCTTCGAGAAGTATCTGTGAATAATGAGTTGAAACCATTCAATTTCAATGTTCGTAGGCGCTTAACAAAATTGTTACAGAATCCAGATTTGTTGGCGGATACTGAAATTCCAGATCATTCTTTTCAAGGGGTTCAGCCTAATGTTCTAGATGAACATACGGAAACAATTGTTAAAGTGATGGATGAATGCAGTCGAATGGATTTCAAACCAAAACCAACATTGTCGCAGTCCAATCCATTAGACGAGACAGAAAAGATACAAAACGTGTGGAGAGATCTCCGTGATCACCGAGTGGATTTAAGACAGCATTCTATCTCAGAAGAGCTTGGTGCTTTTCAAGTTGTTAAACTTGCTAGTGGACTGTGCAATCTAATTTCAGATGTTGACTTGTTTCCTTACTTGGATAAAATGGAACCTTCAATGTTCCTTTCTAATGAAGCCGCATCAAATGGGTATTGTGAACAAATGATGTCCACGGTGGCTGAGCATGGGTTTTGCTTTTACGCTAAGGTTATAGCAGATGAAGGATCAAAGTTGGGTTGTGCAAATTGTGTTGATATTACTTCTGAGATGTTGGCTTCCTCCACTGATATTATGGCTTTGGGGAAATTATCCCGACAGGATCTCTCGAAAATGAAAGCTTTCCGTACTGGAAATGAAGTAGAGTGGAACACCCCAATAAATAATATGCAGAAGAGTGAAAAGAAAAGATCTCTAATCGAGGTCATCCAATCCATTGCTCCTGCAAGAACATCCTTGGCAATGAAAGGTTATGCATTCAACGAATATCTATCTTCATTACGCCAAATTTCAAGGTCTGAAGCTTTCCGTATTTCACAAGTGGTCGAAAAGAAGAGAGGAGGAAGGGTACGGGGCGTTCACCATTACTTGAGCACAAATACCGAGTTGTCTCCAGAAGATATATCTTTGGTGACCGATGGTGATCCATACAGAAAAATTTCTTCCCAACATACAACATAG 3606 0.409 MESTVMDCSPSSSAAPPRRSGRKKLVQSTLFPLKPPEPVEKKDKEDEVDEDYSEAENNKKKRKRSKAKATPPKKVSSKQRPTPRKKATANGTKGSTSQQVLTNSDQVKAPVYDLFLEAKLAAEEDSRIYAGRQIHPFFSLWKEGKKVQDVSESGSNLPTAKSNHKRATCGPIHVFENVKDDTLSVDWRNWTFVENMISVNYGQESVNASVLEGSVESLNFDKLHSSLNRLGISISQNALSSDRLSIIRKKPEEVSPSNPSSLVEQSACLTCENAELDMKVDESVTTTVQAGIFRKSKDTEPLSRFLQESMRSYYRSCLDMEECNLWTNKYKPTKAVEVCGNDESVNFLSDWLHRWHERQYKSRKDNTGTNKSGMQDVEDDDDDYKYSYSDCDSEDINEKDSLPKVLLITGPIGSGKSSAVHACAKEQGFIILEINSSNSTNGTAIRNLEHSLDSLGFKRQSGNSESSHKTSTKSARALAMLSGKAADEANGVDELVTISDDETCTHSGSTLKLHGENDDTEKYKIRRLVLVEDVDILFAEDRGCMAAIQRIAETSKGPIILTSDNPGLPHKFDMLHVPFVLPSPKELLCHLYSVCLAEGVNIHPLLLEKFIHSCDGDIRKSIMHLQFWFQSKTFQKDEKAQTGYGSRPFDLELGHQILPKIMPWDFPSVISDLIENEIAKQTNIMEENSKGLITEKLNVSEQQKDLNVNYIGTDDIEAMKVEMINRNGSLTDYCELEIQRSTISEFSNSSGSPLASSRHNGRRKHVVMSDDEDSNCGYPVDSHDEANMRQLMKETNGCPSEFQLNGNYPGTSVDRLVCSDLEHSEADSAYLNETCKSFDVSCVPESTYVPETEIENGTETLSGAVSSGPALPFVSLREVSVNNELKPFNFNVRRRLTKLLQNPDLLADTEIPDHSFQGVQPNVLDEHTETIVKVMDECSRMDFKPKPTLSQSNPLDETEKIQNVWRDLRDHRVDLRQHSISEELGAFQVVKLASGLCNLISDVDLFPYLDKMEPSMFLSNEAASNGYCEQMMSTVAEHGFCFYAKVIADEGSKLGCANCVDITSEMLASSTDIMALGKLSRQDLSKMKAFRTGNEVEWNTPINNMQKSEKKRSLIEVIQSIAPARTSLAMKGYAFNEYLSSLRQISRSEAFRISQVVEKKRGGRVRGVHHYLSTNTELSPEDISLVTDGDPYRKISSQHTT 1201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02400 1201 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 324 630 IPR027417 -
Viun9g02400 1201 Gene3D - 582 646 - -
Viun9g02400 1201 MobiDBLite consensus disorder prediction 363 382 - -
Viun9g02400 1201 MobiDBLite consensus disorder prediction 36 60 - -
Viun9g02400 1201 MobiDBLite consensus disorder prediction 1 100 - -
Viun9g02400 1201 MobiDBLite consensus disorder prediction 82 100 - -
Viun9g02400 1201 MobiDBLite consensus disorder prediction 61 81 - -
Viun9g02400 1201 MobiDBLite consensus disorder prediction 1 16 - -
Viun9g02400 1201 MobiDBLite consensus disorder prediction 745 776 - -
Viun9g02400 1201 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 11 1198 IPR004582 GO:0006281
Viun9g02400 1201 Gene3D - 324 574 IPR027417 -
Viun9g02400 1201 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 584 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02400 Viun-Chr9 33435051 33445110 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02400 326 627 Core DNA Replication Machinery Family AT5G22010 23.625 1.15e-09 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02400 K26118 - gmx:100784209 1577.76