Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02381 ATGGCATCAGAGCTTCAATTGCCCCCAGGCTTCAGATTCCATCCAACGGACGAGGAGCTCGTGATGCACTACCTCTGCCGCAAATGCGCGTCGCAGCCCATCGCCGTTCCCATCATCGCCGAAATCGACCTCTACAAATACGACCCTTGGGACCTCCCAGGATTGGCTTCTTATGGAGAGAAAGAGTGGTACTTCTTTTCACCACGGGACCGGAAGTACCCTAACGGTTCGAGGCCGAACCGGGCGGCGGGAACCGGTTACTGGAAGGCAACCGGGGCGGATAAGCCCATTGGTCACCCGAAACCGGTTGGGATCAAGAAAGCTTTGGTGTTTTACGCTGGGAAAGCTCCGAAAGGGGACAAAAGCAATTGGATCATGCACGAGTATCGTCTGGCTGATGTAGATCGCACCGTTCGCAAAAAGAACAGCTTAAGGTTGGATGATTGGGTGCTGTGCCGTATCTACAACAAGAAGGGCACGATCGAGAAATTACAACCGACCAGCGACGTAGTCGTGAGCCGGAAAATCGAATCCCCGGAGATCGAAGAGAAGAAGCCGGAGATTCTGAAAAGCGGAGGAGTTCTTCCGCCGCCGCCGGCGATGACGGACTACATGTACTTCGATCCGTCGGATTCAATCCCGAAGCTGCACACGGACTCGAGCTGTTCGGAGCAGGTGGTTTCGCCGGAATTCGCTAGCGAGGTGCAGAGCGAGCCGAAGTGGAACGAGTGGGAGAAGAGCCTGGATTTTCCATTCTACATGGACACCACCACTCTGAGCAACGGCTTCACCCAATTCGCGACCAATAACACCACCACCACCAATAATAATAATAATCAGATGTCGCCGCTGCAGGACATGTTCATGTACTGGCCCAAGCCCTTTTGA 888 0.5405 MASELQLPPGFRFHPTDEELVMHYLCRKCASQPIAVPIIAEIDLYKYDPWDLPGLASYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGHPKPVGIKKALVFYAGKAPKGDKSNWIMHEYRLADVDRTVRKKNSLRLDDWVLCRIYNKKGTIEKLQPTSDVVVSRKIESPEIEEKKPEILKSGGVLPPPPAMTDYMYFDPSDSIPKLHTDSSCSEQVVSPEFASEVQSEPKWNEWEKSLDFPFYMDTTTLSNGFTQFATNNTTTTNNNNNQMSPLQDMFMYWPKPF 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02381 295 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Viun9g02381 295 FunFam NAC transcription factor 16 161 - -
Viun9g02381 295 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Viun9g02381 295 PANTHER NAC TRANSCRIPTION FACTOR 56 7 219 - -
Viun9g02381 295 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Viun9g02381 295 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02381 Viun-Chr9 33300089 33302149 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02381 1 295 NAC Transcription Factor Family AT1G01720 70.915 5.69e-149 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Viun9g02381 NAM 8.8e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02381 - - gmx:100805768 511.531