Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02375 ATGTCGGACGAGGATTCAAAGAAACAGAAGAAGGTGTTTGACGCGGAAACAGCGTCGTCGCTGGTGAAGGAGTTGAGGAAGAACTTTGGTTCGGGAAAGACGCGGAGTTATGAATGGAGAGTGTCGCAGGTGAAGGCTCTCTTGAAAGCGATGGTTGAGAACGAAGAGGAAATCGTGGAAGCTCTTCGTTTAGACCTAGCCAAGCCTTCACTCGAAACCGTCGTGTACGAGATTGGTGTGATTAAAAGCTCATGCGAAGTGATACTGAAGGAATTGAAGCATTGGATGACGCCAGAAAAGGTCAAAACATCAATCAGAACTTTTCCTTCTTCAGCTGAAATAGTACCTGAACCGCTAGGTGTTGTGTTAGTCATATCTCCATGGAACTATCCAATATTGTTGGCCCTTGATCCAGTCCTCGGAGCTATAGCAGCTGGTAATGCAGTGGTTCTAAAGCCATCAGAAATTGCTCCGGCCACAGCATTACTTCTAGAAAAATTGATAGAGAAGTATATGGATCAGTCGATTGTAAGAGTTGTCCAGGGTGCAGTTGATGAAACAACTGCACTACTGCAGCAAAAGTGGGACAAAATTTTTTACACAGGTAATGGAAAAGTTGGAAGAATAGTGATGACTGCTGCTGCAAAACACCTTACACCAGTTTTGCTGGAGCTTGGAGGAAAATCTCCCGTTGTCGTTGATTCAAATATCAACTTGAAGGTAGCAGTTAGACGAATAATTTCTGGCAAGTGGGGATTGAACAATGGACAAGCCTGCATTTCTCCTGATTATGTTATAACAACAAAAGACTATGCTCCTAAGTTGGTGGATGCACTAAAGACTGAATTGCAGGAGTGTTACGGTAAAAATCCGTTGGAATCAGAAGATTTGTCTCGAATTGTGAGTTCCAACCACTTTGCTCGTTTGTCAAAGCTCTTGAATGATGATAAGGTTTCTGGGAAGATTGTTTATGGAGGTGAAAAAGATGAAAATAAACTAAGGATTGCGCCCACTATTCTATTGGATGTTCCGCGAGATTCTCTGATAATGGGTGAGGAGATATTCGGTCCATTGCTTCCAATCATCACGGTCAATGAACTTGATGAAAGTCTAGATGTAATAAACTCAGGAGACAAGGCCCTTGCTGCATATATATTTACAAACGACAAGAAGTTCAAGGAGCAGTTCGTGAAGAATGTTTCCGCTGGGGGTTTGCTTGTCAATGACACTACCCTCCATGTTGTGGTTGATACTTTGCCCTTTGGGGGAGTGGGAGAGAGTGGAATGGGTGCATACCATGGCAAGTTCTCCTTTGATGCTTTTACACACAAAAAAGCTGTTCTTTGA 1347 0.4306 MSDEDSKKQKKVFDAETASSLVKELRKNFGSGKTRSYEWRVSQVKALLKAMVENEEEIVEALRLDLAKPSLETVVYEIGVIKSSCEVILKELKHWMTPEKVKTSIRTFPSSAEIVPEPLGVVLVISPWNYPILLALDPVLGAIAAGNAVVLKPSEIAPATALLLEKLIEKYMDQSIVRVVQGAVDETTALLQQKWDKIFYTGNGKVGRIVMTAAAKHLTPVLLELGGKSPVVVDSNINLKVAVRRIISGKWGLNNGQACISPDYVITTKDYAPKLVDALKTELQECYGKNPLESEDLSRIVSSNHFARLSKLLNDDKVSGKIVYGGEKDENKLRIAPTILLDVPRDSLIMGEEIFGPLLPIITVNELDESLDVINSGDKALAAYIFTNDKKFKEQFVKNVSAGGLLVNDTTLHVVVDTLPFGGVGESGMGAYHGKFSFDAFTHKKAVL 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02375 448 FunFam Aldehyde dehydrogenase 26 230 - -
Viun9g02375 448 SUPERFAMILY ALDH-like 21 447 IPR016161 GO:0016491
Viun9g02375 448 Coils Coil 45 65 - -
Viun9g02375 448 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 26 445 IPR016162 GO:0016491
Viun9g02375 448 Pfam Aldehyde dehydrogenase family 14 447 IPR015590 GO:0016491
Viun9g02375 448 FunFam Aldehyde dehydrogenase 227 427 - -
Viun9g02375 448 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 223 230 IPR029510 GO:0016491
Viun9g02375 448 PANTHER ALDEHYDE DEHYDROGENASE 17 448 IPR012394 GO:0006081
Viun9g02375 448 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 227 427 IPR016163 GO:0016620
Viun9g02375 448 PIRSF ALDH 4 448 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02375 Viun-Chr9 33260493 33264244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02375 78 448 Aldehyde Dehydrogenase Gene Family AT1G44170 71.968 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02375 K00128 - gmx:100783726 769.229