Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02370 ATGGAGTTTGTGGATACCAGAAAACTACAGTTACAACAACAACAACAACATCTGCAACCGCAGGAGCAACATTTTCATGTGTTGGCAGTGGACGACAGTGTCATAGATAGGAAGCTTTTGGAGAGGCTCCTGAGAGGTTCTTCATGCAAAGTGACCTGCGTGGACTCTGGAGACAAGGCTTTGAAATATCTCGGGTTGGTTGAAGACCTTCATGATACTTCTTCTTCAACCTCTTTAGAATCACCATCTTCTCCTCCACCTCAACCATTGCAGCAAGAGGGAATCAAAGTGAATTTGATCATGACAGATTATTGCATGCCTGGGATGAGTGGCTATGATTTACTGAAACGAGTCAAGGGATCTTCTTGGAAAGATGTTCCCGTCGTGATTATGTCATCAGAAAATGTACCTTCCAGAATCAGCATGTGTTTGGAAGGAGGAGCAGAAGAGTTTCTGCTGAAGCCTCTTCAGTTATCAGATTTGGACAAGCTTCAGTCATATTTTGTGAAATCCCTTGAAAACTCTTGTGAAGAAGAATCTGATCATAACAGTTGCATAGATTCGGAGAATGAGAATGTGATCATTAACATCAGTAGTAGCAGTAACAGTAACCATAACAATAACAGTAACAACAGTAACAGCAAAAGGAAGGCCATATCTGCAGAGTCTCATCAGGAGAGATCAAGACCCAAAATGAAGGAGTTGGCTGTGGTGTAA 717 0.4198 MEFVDTRKLQLQQQQQHLQPQEQHFHVLAVDDSVIDRKLLERLLRGSSCKVTCVDSGDKALKYLGLVEDLHDTSSSTSLESPSSPPPQPLQQEGIKVNLIMTDYCMPGMSGYDLLKRVKGSSWKDVPVVIMSSENVPSRISMCLEGGAEEFLLKPLQLSDLDKLQSYFVKSLENSCEEESDHNSCIDSENENVIINISSSSNSNHNNNSNNSNSKRKAISAESHQERSRPKMKELAVV 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02370 238 MobiDBLite consensus disorder prediction 198 218 - -
Viun9g02370 238 SUPERFAMILY CheY-like 25 164 IPR011006 -
Viun9g02370 238 PANTHER TWO-COMPONENT RESPONSE REGULATOR 23 225 IPR045279 GO:0009736
Viun9g02370 238 SMART REC_2 25 165 IPR001789 GO:0000160
Viun9g02370 238 MobiDBLite consensus disorder prediction 198 238 - -
Viun9g02370 238 MobiDBLite consensus disorder prediction 219 238 - -
Viun9g02370 238 CDD REC_typeA_ARR 27 164 - -
Viun9g02370 238 ProSiteProfiles Response regulatory domain profile. 26 169 IPR001789 GO:0000160
Viun9g02370 238 Pfam Response regulator receiver domain 96 162 IPR001789 GO:0000160
Viun9g02370 238 Gene3D - 26 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02370 Viun-Chr9 33190915 33193440 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02370 22 236 Response Regulator Gene Family AT3G57040 45.923 1.14e-61 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Viun9g02370 Response_reg 3.5e-13 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02370 K14492 - gmx:100801334 313.538