Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02365 ATGGGCGATAAGGTGGAGACGCTTGGGAGATTAGCCCAGTGGAAAATCGACAACATTGGACTTTGTTCCTACCAAAAATCTGACCCTTTCAAGGTCGGAATCTGGAACTGGTACTTTTCAATTGTGAGGAATAAGTACCTCTTCATACATCTTTTTCCAGAACCTTCTCCGGTTTCTAAGGATCAACCTCCTTTTGCTCGATTCGTTCTTCGAGTCTCCAATTCTGGCTCATCTCGCAGCTTTCATATTTCCCCTGTTCAAGAAAAGCTGCTCAGGACACATGATGACTTTGTCTGGTCTGTGGAAACTACTTTTGTTGGTCGCTACACCATTGATGTTGAGTTTCTAGACCTGAAGATAAATGGAGAAGAAACTAGTTCTGTTTGGCTATCTGATGGAAATGTGCAATCCGTTGCATCCCAAAGTAGCAGTCTTCGTGTCCTCTCTCGTATGCTTGATGAGGCTAAACATGCTGACCTAACCATCATGACTGCTGATGGCTCATTGAGAGCTCATAAGGCAGTTCTCTCAGCAAGTTCTCCAGTGTTCCAGAGCATGTTTCATCACAACCTGAAGGAAAAAGAGTCTTCTACAATCCATATAGAAGACATGTCACTTGAATCCTGCACGGCTCTTCTTAGTTTCTTGTATGGAACAATCAACAAAAAAGATTTCTCGAAACACCGGCTTGCATTGCTTGGAGCTGCTAATAAATATGACATTGGTGGTCTCAAAGACATCTGTGAGGAAAGCCTTCTGGAAGGTATCCACTCGAGAAATGTTCTTGAGATGCTACATGAGGCTTGGTTGTATCAATTGCCAAAGTTAAAGAATGGGTGTTTTGTGTACTTATTTGAATTTGGTAAGGTACATGATATGAAGGATGAAATGAATATTTTTTTCCAAAATGCGGATAGGGAGCTAATGCTTGAGATGTTTCAGGAGTTGCTTTCAGTTTCGAAACCATGTAAAAGTTAA 978 0.4151 MGDKVETLGRLAQWKIDNIGLCSYQKSDPFKVGIWNWYFSIVRNKYLFIHLFPEPSPVSKDQPPFARFVLRVSNSGSSRSFHISPVQEKLLRTHDDFVWSVETTFVGRYTIDVEFLDLKINGEETSSVWLSDGNVQSVASQSSSLRVLSRMLDEAKHADLTIMTADGSLRAHKAVLSASSPVFQSMFHHNLKEKESSTIHIEDMSLESCTALLSFLYGTINKKDFSKHRLALLGAANKYDIGGLKDICEESLLEGIHSRNVLEMLHEAWLYQLPKLKNGCFVYLFEFGKVHDMKDEMNIFFQNADRELMLEMFQELLSVSKPCKS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02365 325 Gene3D Potassium Channel Kv1.1; Chain A 131 285 IPR011333 -
Viun9g02365 325 PANTHER OS08G0495500 PROTEIN-RELATED 3 322 IPR044714 -
Viun9g02365 325 SMART BTB_4 158 256 IPR000210 GO:0005515
Viun9g02365 325 ProSiteProfiles BTB domain profile. 158 217 IPR000210 GO:0005515
Viun9g02365 325 Pfam BTB/POZ domain 150 253 IPR000210 GO:0005515
Viun9g02365 325 SUPERFAMILY POZ domain 142 254 IPR011333 -
Viun9g02365 325 CDD BTB_POZ_ZBTB_KLHL-like 157 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02365 Viun-Chr9 33095193 33098084 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Viun9g02365 BTB 2e-23 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02365 K10523 - gmx:100787262 546.584