Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02358 ATGGCTAGCTTGATGCAACAGCAACCAAAAGGCGTTAATGTAGGTAGTAATCGCATAGTCGCAGTCAATGTCTCTCCCTCTAACAACCTTCCTACACCATCTCATCACGATGCCTCTTCAAATCATGATCAGAAGCCTGGGTGGAAAAAGTTCATGGCATATGTGGGTCCTGGCTTTCTGGTTTCCTTGGCTTACCTTGATCCTGGAAACATGGAAACTGATCTGCAAGCTGGAGCTGATCACAAATACGAGCTGCTGTGGGTAATACTGATTGGACTGATTTTTGCGCTTATAATTCAATCGTTGGCTGCGAATCTGGGCGTAACGACTGGAAAACACCTTTCAGAGTTATGTAAAGCGGAATATCCATTATTGGTAAAGTACTGCTTGTGGTTATTGGCTGAGCTCGCTGTCATAGCTGCAGACATACCTGAAGTGATTGGCACAGCCTTCGCGTTGAACATACTTTTCCACATCCCTGTATGGGCAGGAGTTCTCATAACTGGCTGCAGCACCCTCTTATTTCTTGGTCTTCAGAGATTTGGGGTAAGGAAGTTGGAACTGCTGATATCAGTGCTAGTTTTTGTAATGGCTGGATGTTTCTTTGGGGAAATGAGCTACGTAAAACCACCTGCTTCTGGTGTATTGAAAGGAATGTTTGTGCCAAAACTCAGTGGTCAGGGAGCTACAGGGGATGCTATTGCTCTTTTGGGTGCCCTTGTCATGCCGCACAACCTTTTCCTCCACTCTGCTCTGGTCCTGTCTAGAAAAGTACCCAGTTCCGTGCGTGGCATCAATGATGCATGTAGATACTTCCTCATAGAAAGTGGATTTGCATTGTTTGTGGCATTCCTAATCAATGTTGCAATGGTTTCTGTGTCGGGAACTGTTTGCGCTGCTGACAATCTTTCTGCAGCAAATGCTAATCAGTGCAGCGATCTTACCCTTAACTCTGCTTCCTTCCTTCTCAAGAACGTGTTGGGACGATCGAGCTCTACCATTTATGCTATAGCACTGCTAGCCTCAGGACAAAGTTCAGCCATCACTGGAACCTATGCAGGACAATACATCATGCAGGGTTTCTTGGACATGAGGATGAAAACATGGATTAGGAACTTTATAACAAGGTGCATTGCCATAACACCTAGTCTTATTGTTTCAATCATTGGGGGTTCTCAAGGGGCTGGTCGGCTTATCATCATTGCATCGATGATACTTTCATTTGAGCTTCCATTCGCTCTGATTCCTCTGCTTAAGTTCAGCAGCAGCAGTACAAAGATGGGACCTCACAAGAATTCTATAATTATAATTGTGATCTCATGGATTCTGGGGTTGGGAATCATCGGCATCAATGTGTACTATCTTTCTACCTCGTTCGTGGGTTGGTTAATTCATAGCAGTCTACCAAAGGTGGCAAATGTGTTGATTGGGATCATAGTGTTTCCTCTAATGGCACTTTATGTTGGCGCAGTTATATACCTAACATTCAGAAAAGACACTGTTAAGACGTATGTTGAGACGAAGAATGAAGCAGCAATGGAAAAAGGGTTTGTGGTTGATGGTCAATTAGAGTTGAGTGAAGTTCCCTACAGAGAAGACTTGGCTGATATCCCCTTACCACCATAA 1626 0.4422 MASLMQQQPKGVNVGSNRIVAVNVSPSNNLPTPSHHDASSNHDQKPGWKKFMAYVGPGFLVSLAYLDPGNMETDLQAGADHKYELLWVILIGLIFALIIQSLAANLGVTTGKHLSELCKAEYPLLVKYCLWLLAELAVIAADIPEVIGTAFALNILFHIPVWAGVLITGCSTLLFLGLQRFGVRKLELLISVLVFVMAGCFFGEMSYVKPPASGVLKGMFVPKLSGQGATGDAIALLGALVMPHNLFLHSALVLSRKVPSSVRGINDACRYFLIESGFALFVAFLINVAMVSVSGTVCAADNLSAANANQCSDLTLNSASFLLKNVLGRSSSTIYAIALLASGQSSAITGTYAGQYIMQGFLDMRMKTWIRNFITRCIAITPSLIVSIIGGSQGAGRLIIIASMILSFELPFALIPLLKFSSSSTKMGPHKNSIIIIVISWILGLGIIGINVYYLSTSFVGWLIHSSLPKVANVLIGIIVFPLMALYVGAVIYLTFRKDTVKTYVETKNEAAMEKGFVVDGQLELSEVPYREDLADIPLPP 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02358 541 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 38 503 IPR001046 GO:0016020|GO:0030001|GO:0046873
Viun9g02358 541 NCBIfam Nramp family divalent metal transporter 56 422 - -
Viun9g02358 541 Hamap Divalent metal cation transporter MntH [mntH]. 34 459 IPR001046 GO:0016020|GO:0030001|GO:0046873
Viun9g02358 541 Pfam Natural resistance-associated macrophage protein 72 433 IPR001046 GO:0016020|GO:0030001|GO:0046873
Viun9g02358 541 PRINTS Natural resistance-associated macrophage protein signature 403 422 IPR001046 GO:0016020|GO:0030001|GO:0046873
Viun9g02358 541 PRINTS Natural resistance-associated macrophage protein signature 371 388 IPR001046 GO:0016020|GO:0030001|GO:0046873
Viun9g02358 541 PRINTS Natural resistance-associated macrophage protein signature 183 204 IPR001046 GO:0016020|GO:0030001|GO:0046873
Viun9g02358 541 PRINTS Natural resistance-associated macrophage protein signature 130 156 IPR001046 GO:0016020|GO:0030001|GO:0046873
Viun9g02358 541 PRINTS Natural resistance-associated macrophage protein signature 343 362 IPR001046 GO:0016020|GO:0030001|GO:0046873
Viun9g02358 541 PRINTS Natural resistance-associated macrophage protein signature 158 177 IPR001046 GO:0016020|GO:0030001|GO:0046873
Viun9g02358 541 PRINTS Natural resistance-associated macrophage protein signature 233 256 IPR001046 GO:0016020|GO:0030001|GO:0046873
Viun9g02358 541 MobiDBLite consensus disorder prediction 25 44 - -
Viun9g02358 541 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 49 425 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02358 Viun-Chr9 33044675 33049455 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02358 15 540 Inorganic Solute Cotransporters AT1G15960 59.623 0.0 631
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02358 K21398 - gmx:100787785 977.622