Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02355 ATGACCACACAGAACCGTCGTTCGTCGTTTTCCTCCTCAACGACGTCGTCTTTGGCCAAACGCCATGCATCCACCACCGCTTCTTCCTCTCTAGCGGCTCCTACAAATGTGCCGAAGAAGCGTCCACCTCTCTCTAACCTCACCAACACCGTCGTTCACCGCAACTCTTCCTCTTCGGTTCCGTGCGCAGCTAAACTCGCGAAGACGAAGAAAGAGGTTGTTCTGCCCTGTTCAGGCAATAAAAGGCCCACGCTTGCGAATGTCAAACCTACTAATGCAATTGTTTTCCCCAAGGCTAATTCTCTCGCTCTGAGGAATGAAGCTCCTCCGCCTCCTCCTCCACTCGTTGTCTCTGTTGCTGTTCCTCCTCCGGTGCTGGATGTTTCGCCTAGTAAATCAGATGCAATGTCGGTCTCTATGGATGAGTCGATGTCTTCTTGTGATTCGTTCAAGAGTCCTGACATTGAATATGTGGACAATAGTGATGTGGCGGCTGTTGATTCAATTGAGAGAAAGACGTTCAGCAATCTCAACATATCTGATTCTTCCGAATCAGGCAACATTTGTAGTAGGGACATACTTGTTGAGTTGGAAAAAGGGGACAAGTTTGTCAATGTTGATAACAATTACGCTGATCCTCAGCTCTGTGCATCCTTTGCTTGTGATATCTACAAGCACCTTCGTGCATCTGAGGCAAAGAAAAGGCCTTCCACAGACTTCATGGAGAGAATTCAGAAGGACATAAACCCTAGCATGCGTGCAATATTGATTGACTGGCTTGTGGAGGTGGCTGAAGAGTATAGACTAGTACCTGATACATTGTATTTGACGGTAAACTACATTGATCGTTATCTTTCAGGAAATGTGATGAACAGACAAAAACTACAATTACTTGGTGTTGCCTCCATGATGATTGCCTCTAAATATGAGGAGATTTGTGCACCTCAGGTGGAGGAGTTTTGTTACATTACTGATAACACGTACTTCAAAGAAGAGGTTTTGCAGATGGAATCTGCTGTCTTAAATTTTCTCAAGTTCGAAATGACAGCCCCAACAGTAAAATGTTTCTTGAGAAGATTTGTACGTGCAGCTCAAGGAGTCGACGAGGTCCCTTCGCTGCAACTTGAGTGCTTGACAAACTATATTGCGGAATTGTCTCTCTTGGAGTACAGTATGCTTTGTTATGCTCCATCACTTATAGCCGCTTCCGCAATTTTTCTGGCAAAATTTATACTTTTCCCTTCAGTGAAACCATGGAACTCCACATTGCAGCATTACACGCTCTACCAGGCTTCTGATCTGTGTGTTTGCGTGAAGGATCTCCACCGCCTATGTTGTAACAGCCTAAACTCAAATTTGCCAGCAATCAGAGAGAAATATAGCCAGCACAAGTACAAATATGTTGCCAAGAAGTACTGCCCTCCTTCAATACCCCCAGAATTTTTCCTGAGTTGA 1455 0.4488 MTTQNRRSSFSSSTTSSLAKRHASTTASSSLAAPTNVPKKRPPLSNLTNTVVHRNSSSSVPCAAKLAKTKKEVVLPCSGNKRPTLANVKPTNAIVFPKANSLALRNEAPPPPPPLVVSVAVPPPVLDVSPSKSDAMSVSMDESMSSCDSFKSPDIEYVDNSDVAAVDSIERKTFSNLNISDSSESGNICSRDILVELEKGDKFVNVDNNYADPQLCASFACDIYKHLRASEAKKRPSTDFMERIQKDINPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNVMNRQKLQLLGVASMMIASKYEEICAPQVEEFCYITDNTYFKEEVLQMESAVLNFLKFEMTAPTVKCFLRRFVRAAQGVDEVPSLQLECLTNYIAELSLLEYSMLCYAPSLIAASAIFLAKFILFPSVKPWNSTLQHYTLYQASDLCVCVKDLHRLCCNSLNSNLPAIREKYSQHKYKYVAKKYCPPSIPPEFFLS 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02355 484 FunFam Mitotic cyclin 6 236 336 - -
Viun9g02355 484 CDD CYCLIN_AtCycA_like_rpt1 212 347 - -
Viun9g02355 484 ProSitePatterns Cyclins signature. 253 284 IPR006671 -
Viun9g02355 484 FunFam Cyclin A1 338 470 - -
Viun9g02355 484 Pfam Cyclin, C-terminal domain 351 470 IPR004367 -
Viun9g02355 484 SMART Cyclin_C_2 351 474 IPR004367 -
Viun9g02355 484 SUPERFAMILY Cyclin-like 211 348 IPR036915 -
Viun9g02355 484 Gene3D - 236 349 - -
Viun9g02355 484 PANTHER CYCLINS 170 462 IPR039361 -
Viun9g02355 484 SUPERFAMILY Cyclin-like 351 476 IPR036915 -
Viun9g02355 484 SMART cyclin_7 355 443 IPR013763 -
Viun9g02355 484 SMART cyclin_7 258 342 IPR013763 -
Viun9g02355 484 Pfam Cyclin, N-terminal domain 222 348 IPR006671 -
Viun9g02355 484 CDD CYCLIN_AtCycA-like_rpt2 351 465 - -
Viun9g02355 484 Gene3D - 222 470 - -
Viun9g02355 484 MobiDBLite consensus disorder prediction 1 57 - -
Viun9g02355 484 PIRSF Cyclin_A_B_D_E 1 479 IPR046965 GO:0016538|GO:0044772
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02355 Viun-Chr9 33014297 33018010 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02355 4 482 Core Cell Cycle Gene Families AT1G44110 62.397 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02355 K06627 - gmx:547781 828.55