Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02330 ATGGGGGCGTGTGGGAGATCTGCTACCGTTAATGATCCCTCTGGAGGGTCTGTTATTGAGCAGCATTTGTGCTCAGAGGTTGCGGAGCAGGCTGTTTCTGTGCAGGAGTCTTGTTCGGAAGTGGCCTGCAATGTTGTGGACTCTAATGCTGACCTCTCCACTGTGGCCGATGGTTATGTGGGAGAGGACCTTGTGGGTTCTGCTAGGTGTCTAGATGAGGGGTCTTGTGATGCTCTGGGTTTGGCAAGTGAATGTGAAAATGCTGATTTGTTGTCACTGGAGAAACCCATTGAAGATGATTGTCTGAATTGTTTGGGGGTTTCTTATGGGGGCATTGAAGTTCCCTGTGCAAGCAGTGGCTCTGAGGGGAATTTTCCGGGTGAGGAAAACATTGATTTGCGGTCGCGGCCCTTGACTACTGGTGATTCACCGAGGCTTTGTGCTCAGCAGGAGGGGCCGAAGGATGATAATAGCCACATGTCACCTGCAGCAGGAGATGAGTCCGTCGTCGAAGGAGGCAAAAACGAGGACACAGGTCTTTTTGGTGATGTTTTCAATCATGTTCTTGATTTCAGGGACTCTGAAATGTCTTTGGAATTAGAATCTGTGGCTGACTTGTTAGTTGATTGCAACCAGCAAAATGAGCAGCAGGAAATTATGAGAAACGCAGACCCCTTGTTGAATGTTGTGGAAAAATGTGATAATCCAATTGGGACAGAAGCAGATGCGTGCAGGCAGATATCTCCTACTGCGGATATGAAAGTGCCATCTGGTGCATTATGTGCAGATACCGAAGTAGAGAGCACAAGTGATCCGAAAGATGGTGAGGTCCAGAATAGTACTTGTGAAGAAAAGGTTAAAGCTTTTGTTGATGAAAAAGTCATTGTCATTAATTCATGTGTAAAAATATTATCCTCTCCAGGTTGCCATGGGACTGTTGAGAGCTCATCTGTATATTCTCCTTGTGAGCCTGCCTTGTTGGATCCAGGGTGTGAAATAAAGAATGATGTACTACAAGTAGAAGATGCTTTCTGCAAATTGAAGGATTGTTCCTCAGAGGAAGCTAGCAACTCCACCTTTAGAAAGCCATTTTCTCCAGAGTCAGGCCTGCCCTCGGTTGCTTCAATTGCCAACTGCTCTTCAAAGGATGTTTCTGATCACCATCGTAAGGGTGATGATGTTTCTACTCCTACTGCTACCAATAATACTGTGGACGATGCAGGGCAGATGGTTAATGATGGAAAAGAAGCAGTTAATGTTGATTGTATCACTGAAAGCATTCCATTACTTTCTCAAAGGAATAGTCGAAGAAGTAAAGTAGGCCGCAAGACACAAACCAAAAAGGCTTCAAGAAGAGGTAAGAACAAAACCAAGGTGACATGTCCAAATGGGGATTATATGAAGTTATATTCAGAGGCTGCTAGAAAGAAAAGAAGTTGTATCTCCAAACCAGCTCGTTCTTCTATCTGGGGATTGATTGGGAATATTGAACATTTTTTGAGCAAGATAATGAGCACGCAGTTGCTGAAGCTGTGTGTCAAGAATTGGGGAAGGCTAGAAGCAAGCGTCAAAGTGGGAAAGCAGTTAAGAATAATGCAAGTACTGGCTCATAGTTCAGTACAGAACTGTCCTGTTTCAACCACCCGTGTTCGTCTAAAGATCAAATTTGGTAAAGAACCTGATTTAAGTTGCTCAAATGTCTGGACTCCTGAGTCTGTTGATGGCTTGGCTTCTGCTTCCTACTTGGAGTCTGGTTCAGCTTCTCAGAAAATAGCCAGCAATCTCGAAGATAAAATGTTGAAAGTGGTGACATTGGGCAATACAGAATCTTTCAACAATAACGCGGATAAGGATGATCTTGTTCGAAATGGACAAGTGGCTAATAGCCTCGTAGAAGGACATACTGAAATAACCGAGAAGGCAGATGGAGATGTAGAGGAACCTTGTCTTGCAGCTCTTCCAGAGAAGGTGGTTGAAGCATTGATTGAACCTATCAACAACAAGGGTATGGATCCTGGAACTTCACCTGATTCTGAAGTTATCAATTCAATCCCCGAAGTCCAGGTTGGAGAGAGACATGAAGAAGATTTACATGATGCTGTTTTAGGTTCTTCTAAAGAGTTAAATTCTAAAGTGGATGCCACTGTCAGTAAAAGAGGGAAGAAGAAAGACAAACTTATCTGTTCAGGTGTTTGTATCACTGAAGATGAATCTCAAGGTCCGCCTAGGAACCGTAGAGGGAAGCAGTCAAAGAACCGCAGGGGTAAGAAAAATTGTAGGGATGCAGTTAGCTCTTTGGAATTGTCTACTCTCACTCAGATAAGCAAATCTGTGAGCAGTAAAGAATTGTGCCCGGAATCTTTGTCCCTTTCTGGAGAGACTGGACTTGGACGCTCTGCTGAGGCTTTGACAGTTAAAAATGACATGGACATTAATACAAGTTGCAAACCATCAGTTGACAGTGGATTTTTAGAATCTCAGGTTTCTGAGAATATGCCATCTTCTGCTAGGCCTTTGGGTCGTAAACTACCTAAAAGTCTTAGACCCAGTAAAGTTAGCAGGACCAAATTTAAAGCTTCTGACTCGGCTGACAGGAAAAAGACTACATGTACACGAAAGGAGAAACAGAAAAAGCCAAGTATTAAGTCTGAAGACAAGAGAAAAGGTGCCTCTCTTAAAATTACATGTGAAATGGAAGATCGCCCACATGCAGAAGCAAGTATTGGAAATCATAAGCTGGTGGATGCTGTTGGAAAAATTAACGCCGAGGACAACAAAGTATCAGTCAACAACATATCTAGTTTGGACATGCCGTCTGGTGTTGGACTGGGTGGTCAACTTCCGTCTCCCCGTAATGCGTGGGTGCGATGCGATGATTGTTACAAATGGAGGCGAATTCCAGCTATGCTTGCAGACCTAATTGATGAAACTAACCGTACCTGGACATGTAAGGACAGCGGTGATAGTGCTTTTGCTGACTGTGCTGTTCCTCAAGAAAAGTCAAATGCAGAGATTAATGCAGAGTTGGGATTATCAGATGCCTCGGGTGACGAAGATGCATATGAAGGCTCCAAAAATTTTAAGGAATTAGATTATCGGCCTCCGTTTGTTTCCCAGGGGTCAACTTTTACCCATATATTCACCAATGAATTCCTGCATCGTAGCCATAAAACTCAGACTATTGATGAGATAATGGTTTGTCATTGCAAGGCAACTCAAGAAGGAAAGTTGGGCTGTGGGGATGAATGCCTAAATCGGATGCTTAATATTGAATGCGTGCAAGGAACATGCCCGTGTGGGGACCGTTGTTCTAACCAGCAGTTCCAAAAACGCAAGTATGCTAGCCTGAGGTGGTTTAAATGTGGGAAAAAGGGTTATGGACTAAAGGCACTTGGCAATGTGGCTAAAGGCCAGTTTCTTATTGAATACGTTGGAGAGGTGCTTGATATGCAAACGTATGAGGCACGGCAAAGAGAATATGCTTTGAAGGGTCATCGACATTTCTATTTTATGACCTTGAATGGCAGTGAGGTAATAGATGCAAGTGCTAAAGGAAACTTGGGGCGTTTCATTAATCATAGTTGTGATCCTAATTGTCGGACAGAAAAGTGGATGGTGAATGGGGAGATCTGTATTGGACTGTTTGCATTGAGGGATATTAAGCAGGATGAAGAATTGACATTTGACTACAACTATGTAAGGGTTTTTGGTGCTGCTGCAAAAAAGTGTTATTGTGGTTCACCTAGTTGTCGAGGTTATATAGGTGGTGGTGATCCACTTAATGCTGAACTGATAGTTCAAAGTGATTCAGAAGAGGAATTTCCAGAACCTGTTATGCTTACGAAAAATGGTGAAATTGAAGAAGCACCCAAGTATTTTAATAATGATGATACAGAATCTGCTAGAAATATGTTAAAAGGCAGGGATGCATTGGAAAAGTCTACAAGTGCTATAGATTCAGTTGGTTCTCCAGAAAAAGAAAGTTCCATGAACCCTGCCTCTGCCGTTTCTCTGTTGCACAGCTCAGCAGAAATGGAGGATTCAAAGGGCAAGTTACCATCTGCCGTTCGAGTTGAAGAAATTTCTCAACAAATGGAGGATGTAACAAGCAAACCCATGCCTGCCGTACAAGGATATGAAAAGGAAAAGGAATCAGAGTTTGCAGACAAAACTTCTTCCACTCAAAGATTAGAGACTACTTCTCCCCTTACAGCTGCTAGCAAAATTTTATCTAATTCTACTGGTAGTAATAGGGAATCCAAGTCTGAAATAATTGAAGGCAAGAAGAATCCCAAACTAAATGGTTCTGTTAAAAAGGGAAAGGTCCATACTAATCCTCCAAATAGCCTTAAAGCTGAGGTGACAGCCAATCGATTGCAGTTGTCATCTGTCAAACCAAAAAGGGTTGAAGGTTCTTCCAATGGACGGTTTGAAGCAGTTCAGGAGAAACTTAATGAGTTGCTGGATGGAGATGGGGGAATAAGCAAAAGAAAGGACGCTACCAAAGGGTACTTGAAGCTTTTGTTTCTCACTGTGGCATCTGGTGATAGAAGCAATGGTGAAGCAATTCAAAGTAATCGAGATCTTTCCATGATACTTGACGCCCTTCTGAAAACAAAATCTAGAGCAGTGCTGAATGATATAATTAACAAAAATGGTTTACAGATGTTACATAACATTATGAAGCAGTACAGGCAGGACTTCAAAAAAATTCCAATCCTGCGGAAGCTTCTGAAGGTCTTAGAGTACCTAGCAGCAAGCAAGATTTTGACACCTGAACAGATTAATGGTGGTCCTCCGTGTCACGGGATGGAGAGCTTTAGAGAATCGATGCTTTCTCTGACAGAGCATGATGACAAACAGGTCCATCAAATTGCTCGAAGCTTCCGAGACAGATGGTTTCCCAGACCCAACAGAAAACATGGCTATTTGGACAGGGATGATAATAGAATGGAATCTCACAGAACTTTCAATGGTAACAGATTTTCAGCATCACACTGTCATAGACATGAACAGGATTTAAGGGCTGCAGAATCAATGGACTGTAGTCAGCAGTCTATGCACGTGACAACCCCAGTAGATGCTGATACCCAGGAAAGCTGTCCTGCCCACTCTGTAGATGGGGTTGAAATCAAAGGACCCAAAAAACGGAAGCGCAAGAGCCGATGGGATCAACCTGCGGACTCAAACTCACTTTGTGATGCTGTTATGAGCTCCATTGGTGAAAGCCAGAACATTCATGAGGATGTTCCACCAGGGTTTTCGTGTCCAATAGGTCCGTTAAATGCTTCTTCCCTAAACTCTGGCAATGTTGTATTGCAAAATGCAAGCCGTTCTGGATGTCCCTCTGATTTAGTAGTTGGTCATTCAAAAAGGAAATTTAATTCTCACTTGCCTGTGGCTTATGGAATGCCATGGTCCGTTGCCCAGCAATATGGAACACCTCATACTGAATTTCCAGAGCGCTGGGTCACTGCACCTGGCATACCTTTCGTTCCATTTCCTCCACTACCCCCATATCCTCGGGACAACAAAGACTCTCAACCTTCTAATAATAATAATAGTGCTATGATAATCGATCAGCCTTGTGAAGCTATGACAAGGGATCACTCTGCTGAAGTTAAGGAGGGCGATAACAGTAGTATGGTCACTTGTTGCGCAGATGATATGATTCCCAGCACAACTAGTGCTAACCCTCAAGAGTCAAACCTTCTGTTTGAGGAAAACGAAGCCAAACGAATGAAGGGTGACTCCCATGATTTGGTAACCAAGTACTATAGACAGCAGAAATGGAATAATTCGAAAATACATCGACCATGGTTCCGGAGGAATGCATGGAAATGTAATGAGAACAACTCTAATGGTGATATGTGCAGTATAGATGTAGATGTACCAAAAGAGTCGGAAGATAATTGTGATGCGGAGGATGCAATCTGTAGAGAGGAGAAAGGTGGCAATAATATTTATTAG 5970 0.4291 MGACGRSATVNDPSGGSVIEQHLCSEVAEQAVSVQESCSEVACNVVDSNADLSTVADGYVGEDLVGSARCLDEGSCDALGLASECENADLLSLEKPIEDDCLNCLGVSYGGIEVPCASSGSEGNFPGEENIDLRSRPLTTGDSPRLCAQQEGPKDDNSHMSPAAGDESVVEGGKNEDTGLFGDVFNHVLDFRDSEMSLELESVADLLVDCNQQNEQQEIMRNADPLLNVVEKCDNPIGTEADACRQISPTADMKVPSGALCADTEVESTSDPKDGEVQNSTCEEKVKAFVDEKVIVINSCVKILSSPGCHGTVESSSVYSPCEPALLDPGCEIKNDVLQVEDAFCKLKDCSSEEASNSTFRKPFSPESGLPSVASIANCSSKDVSDHHRKGDDVSTPTATNNTVDDAGQMVNDGKEAVNVDCITESIPLLSQRNSRRSKVGRKTQTKKASRRGKNKTKVTCPNGDYMKLYSEAARKKRSCISKPARSSIWGLIGNIEHFLSKIMSTQLLKLCVKNWGRLEASVKVGKQLRIMQVLAHSSVQNCPVSTTRVRLKIKFGKEPDLSCSNVWTPESVDGLASASYLESGSASQKIASNLEDKMLKVVTLGNTESFNNNADKDDLVRNGQVANSLVEGHTEITEKADGDVEEPCLAALPEKVVEALIEPINNKGMDPGTSPDSEVINSIPEVQVGERHEEDLHDAVLGSSKELNSKVDATVSKRGKKKDKLICSGVCITEDESQGPPRNRRGKQSKNRRGKKNCRDAVSSLELSTLTQISKSVSSKELCPESLSLSGETGLGRSAEALTVKNDMDINTSCKPSVDSGFLESQVSENMPSSARPLGRKLPKSLRPSKVSRTKFKASDSADRKKTTCTRKEKQKKPSIKSEDKRKGASLKITCEMEDRPHAEASIGNHKLVDAVGKINAEDNKVSVNNISSLDMPSGVGLGGQLPSPRNAWVRCDDCYKWRRIPAMLADLIDETNRTWTCKDSGDSAFADCAVPQEKSNAEINAELGLSDASGDEDAYEGSKNFKELDYRPPFVSQGSTFTHIFTNEFLHRSHKTQTIDEIMVCHCKATQEGKLGCGDECLNRMLNIECVQGTCPCGDRCSNQQFQKRKYASLRWFKCGKKGYGLKALGNVAKGQFLIEYVGEVLDMQTYEARQREYALKGHRHFYFMTLNGSEVIDASAKGNLGRFINHSCDPNCRTEKWMVNGEICIGLFALRDIKQDEELTFDYNYVRVFGAAAKKCYCGSPSCRGYIGGGDPLNAELIVQSDSEEEFPEPVMLTKNGEIEEAPKYFNNDDTESARNMLKGRDALEKSTSAIDSVGSPEKESSMNPASAVSLLHSSAEMEDSKGKLPSAVRVEEISQQMEDVTSKPMPAVQGYEKEKESEFADKTSSTQRLETTSPLTAASKILSNSTGSNRESKSEIIEGKKNPKLNGSVKKGKVHTNPPNSLKAEVTANRLQLSSVKPKRVEGSSNGRFEAVQEKLNELLDGDGGISKRKDATKGYLKLLFLTVASGDRSNGEAIQSNRDLSMILDALLKTKSRAVLNDIINKNGLQMLHNIMKQYRQDFKKIPILRKLLKVLEYLAASKILTPEQINGGPPCHGMESFRESMLSLTEHDDKQVHQIARSFRDRWFPRPNRKHGYLDRDDNRMESHRTFNGNRFSASHCHRHEQDLRAAESMDCSQQSMHVTTPVDADTQESCPAHSVDGVEIKGPKKRKRKSRWDQPADSNSLCDAVMSSIGESQNIHEDVPPGFSCPIGPLNASSLNSGNVVLQNASRSGCPSDLVVGHSKRKFNSHLPVAYGMPWSVAQQYGTPHTEFPERWVTAPGIPFVPFPPLPPYPRDNKDSQPSNNNNSAMIIDQPCEAMTRDHSAEVKEGDNSSMVTCCADDMIPSTTSANPQESNLLFEENEAKRMKGDSHDLVTKYYRQQKWNNSKIHRPWFRRNAWKCNENNSNGDMCSIDVDVPKESEDNCDAEDAICREEKGGNNIY 1989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02330 1989 ProSiteProfiles Zinc finger CW-type profile. 948 1002 IPR011124 GO:0008270
Viun9g02330 1989 SMART set_7 1114 1237 IPR001214 GO:0005515
Viun9g02330 1989 MobiDBLite consensus disorder prediction 854 890 - -
Viun9g02330 1989 SMART PostSET_3 1239 1255 IPR003616 -
Viun9g02330 1989 MobiDBLite consensus disorder prediction 119 175 - -
Viun9g02330 1989 Pfam CW-type Zinc Finger 954 1000 IPR011124 GO:0008270
Viun9g02330 1989 MobiDBLite consensus disorder prediction 1312 1334 - -
Viun9g02330 1989 MobiDBLite consensus disorder prediction 734 760 - -
Viun9g02330 1989 MobiDBLite consensus disorder prediction 818 890 - -
Viun9g02330 1989 Pfam SET domain 1125 1231 IPR001214 GO:0005515
Viun9g02330 1989 SUPERFAMILY SET domain 1042 1252 IPR046341 -
Viun9g02330 1989 FunFam Histone-lysine N-methyltransferase 946 1007 - -
Viun9g02330 1989 PANTHER SET DOMAIN PROTEINS 452 1729 - -
Viun9g02330 1989 MobiDBLite consensus disorder prediction 1363 1449 - -
Viun9g02330 1989 MobiDBLite consensus disorder prediction 1392 1420 - -
Viun9g02330 1989 CDD SET_SETD2 1113 1255 IPR044437 GO:0010452|GO:0046975
Viun9g02330 1989 SMART shorttest3 1062 1113 IPR006560 GO:0005634|GO:0042054
Viun9g02330 1989 MobiDBLite consensus disorder prediction 432 458 - -
Viun9g02330 1989 MobiDBLite consensus disorder prediction 818 834 - -
Viun9g02330 1989 MobiDBLite consensus disorder prediction 1695 1730 - -
Viun9g02330 1989 ProSiteProfiles SET domain profile. 1114 1231 IPR001214 GO:0005515
Viun9g02330 1989 Pfam AWS domain 1077 1111 IPR006560 GO:0005634|GO:0042054
Viun9g02330 1989 MobiDBLite consensus disorder prediction 436 455 - -
Viun9g02330 1989 ProSiteProfiles Post-SET domain profile. 1239 1255 IPR003616 -
Viun9g02330 1989 Gene3D - 951 1011 - -
Viun9g02330 1989 MobiDBLite consensus disorder prediction 382 409 - -
Viun9g02330 1989 FunFam Histone-lysine N-methyltransferase 1013 1270 - -
Viun9g02330 1989 ProSiteProfiles AWS domain profile. 1062 1112 IPR006560 GO:0005634|GO:0042054
Viun9g02330 1989 MobiDBLite consensus disorder prediction 1316 1334 - -
Viun9g02330 1989 Gene3D SET domain 1013 1264 IPR046341 -
Viun9g02330 1989 MobiDBLite consensus disorder prediction 1377 1391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02330 Viun-Chr9 32837627 32852244 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02330 1097 1254 C2H2 Transcription Factor Family AT2G23740 32.597 1.84e-19 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Viun9g02330 SET 1.5e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02330 - - gmx:100795379 2848.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02330 9 32837627 32852244 Viun9g02330 9 32837627 32852244 ECH