Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02314 ATGGCTTCAGCACGAGACACTACAACAGTTGTGCTAGTTGCTTGCTTAGTAATGATCTCAGCAGCGTCACAAACAATTCGTCCGAGCTGCCAAAAAGAATGTGGAAGCGTTAGCATTCCGTATCCATTTGGTACAACTGAGCACTGTTACATGAACAGCAACTTTTATGTTGCTTGTAACACAAGTCACAAGCCTCCCAAACTATTTCTGTGGAATGTCACAAAAAATATTGAGATATTAGAGTTGTCACTGAATGGTCATTTGCGAGTAAAATCCCCAGTAGCGTATGTCTGCTATGATGAAAAGGGTGTGCTAGTGGATTCAGGGAATTCATCTATGACTTTGCAAGCATTTCCCTTCTCCTACACCCAGAACAAGTTCGTAGGAATTGGATGCGACACCCTTTCAACCATCAATGCAACAATCGGGAAAAACTACTCTGCTGGAGGGTGTTTCTCGCTTTGCAGTAGTGTAGAAAGTTCAACCAATGGATCCGGGTTTGGCATTGGTTTCTGCCAAACCTCCATCCCAAAAAACATTTTGGCATATCAAGCTCGTGTCCTGAGATCAAATATGCTTCATAGGGATATGAATATTCCTTGCAGCTACTCTCTTTTGGTGGAAGAAGACTCTTTCGAGTTTTCCAGGGATGACTTCATCAAACTGCAGAAGAGAAGAACAGTTCCCACAGTGCTTGACTGGGCTGTTGGGAATCTAACATGTGAAGAAGCTAAGAACAATTTGACTAGTTATGTTTGCCAAGAAAATAGCGTGTGTATTGATTCTCAAAATGGACCCGGTTACCTCTGCGAATGCTTAGAAGGTTATGTGGGAAATGCATACCTTCAGGGTGGATGCCAAGATATTGATGAGTGTGCAAATCCGAGTCTAAATGACTGTTCAGACATTTGCATTAACCTACCCGGGAGCTATAATTGTTCGTGTCCCAAGACCAGGAAGCACAAGGGAGATGGCAGAAAAGGAGGAAGTGGCTGTGTCTCGAATCTACAACATGTGGTTAACGAGATTGTGATAGGAACTGGCATAGGCCTTGTGCTGCTGTTAGCTGGTAGTGGTTGGCTATACCACGTGTTTCGAGAAAGAAAACGGGTGAGTCTCTCAGCGCGATATTTTAAGAGAAATGGTGGCTTAATGTTAGAGCAGCAAATTTCAAAGATGGAGGGATCATCTGAGAGGGCTAAAATATTTACTGCAAGAGAGCTTAAGAAAGCCACTGAAAACTTTCACGAGAGCAGAATTATTGGCAGAGGAGGATACGGCACAGTTTATAAAGGGATTCTTCCAAATGACCAAGTTGTTGCCATAAAGAAATCAAAACTAGTAGATCACAGCCAGATTGAACAATTTGTCAATGAAGTGGTTGTACTTTCGCAGATTAACCACAGAAACGTGGTCAAACTCCTAGGTTGTTGTCTAGAGACAGAAATGCCACTGCTAGTTTATGAATTTGTGAACAACGGAACACTCTTTGACCACATTCACAATGAAAACACCACACTTCCCTGGGAAACACGTCTAAGAATAGCAGCAGAAACAGCTGGTGTGCTTGCTTACTTGCATTCTTCTGCTTCCATACCAATCATCCATAGGGACTTCAAGTCAACTAACATACTCTTAGATGACAAATACACAGCTAAGGTTTCTGACTTTGGAACCTCTAGATTGGTTCCACGTGACAAGTGTCAGTTGACAACGTTGGTTCAGGGAACTCTAGGGTACCTTGACCCTGAATACTTTCAGACCAGTCAACTAACTGAGAAAAGTGACGTGTATAGCTATGGTGTTGTACTTGCTGAGTTGATAACTGGAAGAAGGGCACTTTCTTTTGACATGCCAGAGGAGGAGAGGAATTTGGCGTTGTATTTTCTTTCGGCTGTGAAGGATGATTGCTTGTTCGAAATTGTTGAGGATTTTGTCAATGAGGGAAACAGTGAGCAGGTGAAGGAAGTTTCTAACATTGCTCAATGGTGCCTGAGGCTGAGAGGGGAGGAAAGACCTACCATGAAGGAAGTTGCTATGGAATTGGAAAGTCTCAAAACGATGACAGCAACAACTTCATTGATTAGTGCCACATCAAATGCAGCAGAATATGTTATTGGTGAAAGATCAGGTTCAGCAGAAAGAGACACTGCTAATTGTCATTATACTTATGGTATACGTGCTGGACCTGAGGATGATACCATTTGCAAAGATGTGATGTCACCGTTATGGGATGCAATGTCTATGGACTCTAAGCAGCTGCTACTGCAGCTGCTTCTTGTTGCCCTCCTTATTGCGAAAACCAAAACTCAAACCATATCAAAGCCAAACTGTTCATCAAACTGTGGCGATGTCACCATTCCCTTCCCCTTCGGCATCTCCGACACTTGTTCCTTAGACACCTCATTTGTCCTCTCTTGCAACCAAACCTCTCCTTCATCACACACCCTTCTCCTGCCACAAACCAATATAACTGTTCTAAACATCTCACTCGACGGCCACATGCAAATTTCATGGCCTGTAGCCAGCGACTGTTACGCCGACAGAGGAAAACTCGTGAGGCAAACATTTCAAGACCTAAACCTCACAACTTTACAAGTCTCTTCCAGCAGAAACAGGTTGACTGTAGTTGGGTGTGACACGCTTGGATTAGTGGTGGGAAGCGATTTGGAGGGAAAGAACTACACCACGGGATGCATTTCCTTGTGCAACAGGCTTCAAGACATCGTAACAAATGGGACTTGTTCCGGCACCGGTTGTTGCGAGATCTCGATTCCACGCGGGTTGTCGAGTTTCTCCTACGGTTCTGGGAGTTTGTTCAACCACACGCATGTGATAGACTTCAACCCGTGCGGGTATGCGTTCCTGGTGGAAGATGGGGCCTACAATTTCTCCTCCACGGACCTCGTCAAGTTCGACAAAACCACGTTTCCTGTGGCGATGAATTGGGTGGTTAAGAACCAAACGTGCGAAGAAGCTAAGAAAGAGGCTTCCAGTTACGCGTGTAAGGCAGAGAACAGTGAATGTTTCCATTCAGTGGAGGGATCTGGTTACCTTTGCAACTGCGCAAATGGTTTCGAGGGAAACCCTTATCTCCTTCATGGTTGCGAAGATGTTAATGAATGCATGGGATCCAACGATTGCGTTGAAGGGGCCAAATGCAGTAACTCTCCTGGTAGTTATAACTGTGTATGCCCAAAAGGATTCGAAGGAGATGGGAAAAATTATGGAACAAGATGCACTCAGAAATCTAGCATGAATTCAAGGAAAGAAATCGTACTCATAATTGCTCTGAGTGTGAGTGTAGGCCTAGTGGCACTACTTGCGGGAAGCTTTTATGTGTATTGGGCATCAAAGAAAAGAAAGATCATCAAACTCAAAGAACAATTTTTTCAACAAAATGGTGGTGTTTTCTTACAACAACACATAATCAAGCATAAAGGATCAATTGAAACGGCTAAAGTCTTCACTATAGAGGAGCTAGAAGAGGCCACCGACAACTTTGATGAAGGCAAGATTCTTGGCCAAGGTGGCCAAGGAACAGTTTACAAAGGAGTATTGGTAGACAATAGAACAGTGGCAATTAAGAAGTCCAAAATCAGTGATCCAAATCAGATTGAGCAATTCATTAACGAGGTGATTGTGCTTTCCCAAATCAATCACAGGAATGTGGTAAAACTCTTGGGTTGTTGTTTGGAGACAGAAGTTCCTATGCTTGTGTATGAATTCATTCCCAATGGTACTATTTATGAGCACCTTCATGATCATAATTGTTCTCTAAAACTTACATGGAAAACAAGGTTGAGAATAGCAACAGAAACAGCAGGGGCCTTGGCTTATCTGCACTCAGCTACTTGTACACCAATCATACACAGAGATGTGAAGACTACAAATATTCTTCTTGATCATAATCTCATTGCAAAGGTTTCAGATTTTGGTGCATCAAGGATTTTCCCCCTTGATCAGTCTCAACTAACCACTCTGGTGCAGGGAACATTAGGGTATCTTGATCCAGAATACTTTCACACAAGCCAATTGACAGAGAAGAGTGATGTGTATAGTTTTGGGGTTGTTCTGGCTGAACTAGTAACAGGAAAGAAGGCACTTTCATTTGATAGGCCAGAGGCTGATAGAAACCTTGCAGTGTACTTTGTTTCTTCCATGAAAACAGGTCAATTACTTAACATTGTGGACAACCAAATACTGCATGATGCAGATGTTGAGCAAGTGACAGAAGTTGCAAATATTGCAAATCGATGTTTAAAGGTGAAAGGAGAGGAAAGACCGACCATGAAAGAAGTGGCAATGGAACTTGAGGGACTTCAAATTGTGGGAAAGCACAGATGGGAAAGTGTTAGTTCATCTTCAGAAGAGACTGAAAACTTCATAAACTCAGCACCATCCATTCTTTGTGTTGAAAGTGGCATTAATTCAGCATTTGATAGCTTAAACCAGATTTCCACCTCTTTGGGGAGTGGAAGATGA 4485 0.4292 MASARDTTTVVLVACLVMISAASQTIRPSCQKECGSVSIPYPFGTTEHCYMNSNFYVACNTSHKPPKLFLWNVTKNIEILELSLNGHLRVKSPVAYVCYDEKGVLVDSGNSSMTLQAFPFSYTQNKFVGIGCDTLSTINATIGKNYSAGGCFSLCSSVESSTNGSGFGIGFCQTSIPKNILAYQARVLRSNMLHRDMNIPCSYSLLVEEDSFEFSRDDFIKLQKRRTVPTVLDWAVGNLTCEEAKNNLTSYVCQENSVCIDSQNGPGYLCECLEGYVGNAYLQGGCQDIDECANPSLNDCSDICINLPGSYNCSCPKTRKHKGDGRKGGSGCVSNLQHVVNEIVIGTGIGLVLLLAGSGWLYHVFRERKRVSLSARYFKRNGGLMLEQQISKMEGSSERAKIFTARELKKATENFHESRIIGRGGYGTVYKGILPNDQVVAIKKSKLVDHSQIEQFVNEVVVLSQINHRNVVKLLGCCLETEMPLLVYEFVNNGTLFDHIHNENTTLPWETRLRIAAETAGVLAYLHSSASIPIIHRDFKSTNILLDDKYTAKVSDFGTSRLVPRDKCQLTTLVQGTLGYLDPEYFQTSQLTEKSDVYSYGVVLAELITGRRALSFDMPEEERNLALYFLSAVKDDCLFEIVEDFVNEGNSEQVKEVSNIAQWCLRLRGEERPTMKEVAMELESLKTMTATTSLISATSNAAEYVIGERSGSAERDTANCHYTYGIRAGPEDDTICKDVMSPLWDAMSMDSKQLLLQLLLVALLIAKTKTQTISKPNCSSNCGDVTIPFPFGISDTCSLDTSFVLSCNQTSPSSHTLLLPQTNITVLNISLDGHMQISWPVASDCYADRGKLVRQTFQDLNLTTLQVSSSRNRLTVVGCDTLGLVVGSDLEGKNYTTGCISLCNRLQDIVTNGTCSGTGCCEISIPRGLSSFSYGSGSLFNHTHVIDFNPCGYAFLVEDGAYNFSSTDLVKFDKTTFPVAMNWVVKNQTCEEAKKEASSYACKAENSECFHSVEGSGYLCNCANGFEGNPYLLHGCEDVNECMGSNDCVEGAKCSNSPGSYNCVCPKGFEGDGKNYGTRCTQKSSMNSRKEIVLIIALSVSVGLVALLAGSFYVYWASKKRKIIKLKEQFFQQNGGVFLQQHIIKHKGSIETAKVFTIEELEEATDNFDEGKILGQGGQGTVYKGVLVDNRTVAIKKSKISDPNQIEQFINEVIVLSQINHRNVVKLLGCCLETEVPMLVYEFIPNGTIYEHLHDHNCSLKLTWKTRLRIATETAGALAYLHSATCTPIIHRDVKTTNILLDHNLIAKVSDFGASRIFPLDQSQLTTLVQGTLGYLDPEYFHTSQLTEKSDVYSFGVVLAELVTGKKALSFDRPEADRNLAVYFVSSMKTGQLLNIVDNQILHDADVEQVTEVANIANRCLKVKGEERPTMKEVAMELEGLQIVGKHRWESVSSSSEETENFINSAPSILCVESGINSAFDSLNQISTSLGSGR 1494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02314 1494 Gene3D Transferase(Phosphotransferase) domain 1 1244 1461 - -
Viun9g02314 1494 Gene3D Transferase(Phosphotransferase) domain 1 491 704 - -
Viun9g02314 1494 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 1054 1065 IPR000152 -
Viun9g02314 1494 FunFam Wall-associated receptor kinase 2 491 704 - -
Viun9g02314 1494 Gene3D Plasmodium vivax P25 domain 941 1088 - -
Viun9g02314 1494 SMART egfca_6 288 333 IPR001881 GO:0005509
Viun9g02314 1494 SMART egfca_6 241 287 IPR001881 GO:0005509
Viun9g02314 1494 SMART egfca_6 1038 1081 IPR001881 GO:0005509
Viun9g02314 1494 CDD EGF_CA 288 316 - -
Viun9g02314 1494 ProSitePatterns Serine/Threonine protein kinases active-site signature. 534 546 IPR008271 GO:0004672|GO:0006468
Viun9g02314 1494 ProSitePatterns Protein kinases ATP-binding region signature. 421 444 IPR017441 GO:0005524
Viun9g02314 1494 Pfam Calcium-binding EGF domain 288 318 IPR001881 GO:0005509
Viun9g02314 1494 Pfam Calcium-binding EGF domain 1038 1080 IPR001881 GO:0005509
Viun9g02314 1494 FunFam Wall-associated receptor kinase 2 239 290 - -
Viun9g02314 1494 Gene3D Laminin 291 327 - -
Viun9g02314 1494 FunFam Wall-associated receptor kinase 2 385 490 - -
Viun9g02314 1494 CDD EGF_CA 1038 1072 - -
Viun9g02314 1494 SUPERFAMILY EGF/Laminin 287 323 - -
Viun9g02314 1494 CDD STKc_IRAK 1174 1441 - -
Viun9g02314 1494 Gene3D Phosphorylase Kinase; domain 1 380 490 - -
Viun9g02314 1494 Pfam Protein tyrosine and serine/threonine kinase 1171 1438 IPR001245 GO:0004672|GO:0006468
Viun9g02314 1494 SMART egf_5 1041 1081 IPR000742 -
Viun9g02314 1494 SMART egf_5 240 287 IPR000742 -
Viun9g02314 1494 SMART egf_5 989 1037 IPR000742 -
Viun9g02314 1494 SMART egf_5 291 333 IPR000742 -
Viun9g02314 1494 SUPERFAMILY Protein kinase-like (PK-like) 401 696 IPR011009 -
Viun9g02314 1494 Gene3D Phosphorylase Kinase; domain 1 1140 1243 - -
Viun9g02314 1494 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 768 1449 IPR045274 GO:0007166
Viun9g02314 1494 ProSiteProfiles EGF-like domain profile. 1038 1081 IPR000742 -
Viun9g02314 1494 ProSiteProfiles Protein kinase domain profile. 415 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02314 1494 Gene3D Laminin 240 290 - -
Viun9g02314 1494 Pfam Protein kinase domain 415 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02314 1494 ProSitePatterns Calcium-binding EGF-like domain signature. 1038 1063 IPR018097 GO:0005509
Viun9g02314 1494 ProSiteProfiles EGF-like domain profile. 245 287 IPR000742 -
Viun9g02314 1494 SUPERFAMILY EGF/Laminin 1038 1075 - -
Viun9g02314 1494 SUPERFAMILY Protein kinase-like (PK-like) 1152 1438 IPR011009 -
Viun9g02314 1494 FunFam Fibrillin 2 1033 1076 - -
Viun9g02314 1494 SMART serkin_6 1168 1444 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02314 1494 SMART serkin_6 415 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02314 1494 FunFam Wall-associated receptor kinase 2 1244 1461 - -
Viun9g02314 1494 ProSiteProfiles Protein kinase domain profile. 1168 1450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02314 1494 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1289 1301 IPR008271 GO:0004672|GO:0006468
Viun9g02314 1494 Pfam Wall-associated receptor kinase galacturonan-binding 30 88 IPR025287 GO:0030247
Viun9g02314 1494 Pfam Wall-associated receptor kinase galacturonan-binding 778 834 IPR025287 GO:0030247
Viun9g02314 1494 CDD STKc_IRAK 421 685 - -
Viun9g02314 1494 ProSitePatterns Calcium-binding EGF-like domain signature. 288 313 IPR018097 GO:0005509
Viun9g02314 1494 FunFam Wall-associated receptor kinase 2 1138 1243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02314 Viun-Chr9 32631912 32638459 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02314 27 722 Receptor kinase-like Gene Family AT1G21230 45.021 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Viun9g02314 PK_Tyr_Ser-Thr 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02314 - - var:108330433 2793.45