Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun9g02309 | ATGTGTAGCAGAAATTGTGTGCAGTTTAGCAAAATCATTGGAAGGGGCAATTTAATGCAGATGGGCTTCTATTTAAACCAGATGCTACTTCTGGTGCTCCTGAGTGCAGCAGCAGCTAAAACCCAACCTATTTCAAAGCCAAACTGCCCAACAAAGTGCGGCGATGTTAGCATTCCCTTTCCCTTTGGCCTCACTGAGCACTGTTCTCTCAACACCTCATTTCTCATCACTTGCAACCAAACCCTTTCACCACCCATTCCATTCTTGAACAGTACTCAACAAAGTCTTTCATCACCCTTTAACTTCTTGAATGCTACTTATGAAAAGCTGCGGGTGCTGAACATCTCACTCGACGGCCAACTGAACGTTTCATTGCCGGTTGCTACAAGTTGCGTCAATAACAAGACTGGTGAATCAGACAACCAATTTTTTATCATCACGTTCGACACACCTTTTCACCTATCATCCAAGCAAAACAAGTTAACTGTATTGGGCGCTGACACGGCAGGACTTGTATCTGGTCAAGATTCAACATCCAAAACACCATACGCTCCCACTTCTTGCGTGTCCATCAACACCACAAACCCAATTTACAACTACACACATGACGACTGCTCCGGCAGTTTTTGTTGCGAGACTCCAATTCAACATAGGCTATCGGAATTCGGCTATATTTCTGCTTCAAATATCTTCAACAAAAACTACACCAAGCCATATCAGTCCTACCCATGTGGTTATACATTTCTGGTTAAGGAGGGAGCCTACAATTTCTCCATGACAGACCTCATCAATTTTAACAGAACCAAAACGTTTCCTGTGGTTGTCGATTGGGCAGTGGGGAACACGTGCCGAGCTGCTCAAAAGAATACTTCAAGCTATGCGTGTAAGTCAAAGTACAGTGAATGTCACAATGCAAAGGTGGGACCTGGTTACCATTGTAAATGCTCCTCTGGTTTTCGAGGAAATCCTTACCTACCTCATGGTTGTCAAGATGTTGATGAATGCACTGAGGAATCCCACGACTGTCTAAAGGGGAGATCAAAATGCTGCAACAGTCCAGAAGGGAGCTACACTTGTTTATGTCCAAAGGGATACGAAGGAGATGGGAAGATTAATGGAAGCGGATGTGTTAGAAGGAGTAACCGCAAAATCACAATTGCTTTCAGTGTGAGTGGAAGTATATTGGCACTGCTGGGGGGAACCTTATACGTGTACTGCACATTAAAGAAAAGAAAACTCAACAGACTTAAAGAACATTTTTTCCAACTAAACGGTGGCCAGTTATTACAGCAACAGATAGGCAGGTATAGTGGATCAAATGAATTGACAAAAATCTTTACTGTGGAAGAACTAAAAGATGCCACCAACAATTTCAGTGAAGAGATGGTCTTAGGCGCAGGTGGGGAGGGAACAGTTTACAAAGGAATATTACCTGACAATAGAACTGTAGCAATTAAAAAGTCGAGAATTAGTAACCCAAACCAAATTGAGCATTTCATCAATGAGGTGATTCTGCTTTGTCAAATCAACCATAGAAATGTGGTGAAACTCTTGGGGTGTTGTTTAGAGACAGAGGTTCCCTTACTTGTTTATGAATTCGTTCCCCATGGAACTGTTTACGACCATCTCCACGATCAAACCAAATCTTTAAGACTTACATGGAAAAGAAGATTACAAATAGCAGTTGAAACTTCTGGGGCCCTGGCATACTTGCATTCTGCTACCCATGCACCAATCGTACATAGAGATGTGAAAACTTCAAACATACTACTTGATCACAATCTCACTGCAAAGGTTTCTGATTTTGGAGCTTCAAGGATTATTCCTCTTGACAGAAGTGAGTTAACCACTTTGGTGATGGGAACACTGGGGTATCTTGACCCACAATACTTCCACTCAAGCCAGTTAACAGAGAAAAGTGATGTTTATAGTTTTGGAGTTGTCCTAGTCGAACTAATAACAGGAGAGAAGGCACTCTCTTTTGATAGGGCAGAGGCTCATAGAAACCTAGGGGTTCACTTCCTTTCTTCAATGAATGAGGGTCGGTTACTTGACATTGTGGATGGCCGCATAATAGATGAGGCGAATGTTGAGCAACTAATGGTTGTTGCAAACATAGCAAGCCATTGTTTAAGGATGAAGGGGGAGGAGAGGCCTACCATGAGAGAAGTGGCAATGGAACTTGAAGGAATAAACACTGTGGAGAAGCACCAATGGGAAAAAGTCAACTTGTCATCAGAGGAGACTGAAACTCTTCTCAAAGCACCACCGTCATCTTCTTTTAGTGTAGATGGTGTTAACAGAAGAACCATGCTTGCTGGCTCTGATATTTTAAACCGAATTTCCTTCTCCTTAACTAGTGGAAGATGA | 2370 | 0.4245 | MCSRNCVQFSKIIGRGNLMQMGFYLNQMLLLVLLSAAAAKTQPISKPNCPTKCGDVSIPFPFGLTEHCSLNTSFLITCNQTLSPPIPFLNSTQQSLSSPFNFLNATYEKLRVLNISLDGQLNVSLPVATSCVNNKTGESDNQFFIITFDTPFHLSSKQNKLTVLGADTAGLVSGQDSTSKTPYAPTSCVSINTTNPIYNYTHDDCSGSFCCETPIQHRLSEFGYISASNIFNKNYTKPYQSYPCGYTFLVKEGAYNFSMTDLINFNRTKTFPVVVDWAVGNTCRAAQKNTSSYACKSKYSECHNAKVGPGYHCKCSSGFRGNPYLPHGCQDVDECTEESHDCLKGRSKCCNSPEGSYTCLCPKGYEGDGKINGSGCVRRSNRKITIAFSVSGSILALLGGTLYVYCTLKKRKLNRLKEHFFQLNGGQLLQQQIGRYSGSNELTKIFTVEELKDATNNFSEEMVLGAGGEGTVYKGILPDNRTVAIKKSRISNPNQIEHFINEVILLCQINHRNVVKLLGCCLETEVPLLVYEFVPHGTVYDHLHDQTKSLRLTWKRRLQIAVETSGALAYLHSATHAPIVHRDVKTSNILLDHNLTAKVSDFGASRIIPLDRSELTTLVMGTLGYLDPQYFHSSQLTEKSDVYSFGVVLVELITGEKALSFDRAEAHRNLGVHFLSSMNEGRLLDIVDGRIIDEANVEQLMVVANIASHCLRMKGEERPTMREVAMELEGINTVEKHQWEKVNLSSEETETLLKAPPSSSFSVDGVNRRTMLAGSDILNRISFSLTSGR | 789 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun9g02309 | 789 | CDD | EGF_CA | 331 | 368 | - | - | |
Viun9g02309 | 789 | Pfam | Wall-associated receptor kinase galacturonan-binding | 49 | 119 | IPR025287 | GO:0030247 | |
Viun9g02309 | 789 | Gene3D | Transferase(Phosphotransferase) domain 1 | 534 | 752 | - | - | |
Viun9g02309 | 789 | SMART | egfca_6 | 331 | 377 | IPR001881 | GO:0005509 | |
Viun9g02309 | 789 | CDD | STKc_IRAK | 464 | 731 | - | - | |
Viun9g02309 | 789 | SMART | egf_5 | 294 | 330 | IPR000742 | - | |
Viun9g02309 | 789 | SMART | egf_5 | 334 | 377 | IPR000742 | - | |
Viun9g02309 | 789 | FunFam | Fibrillin 2 | 326 | 372 | - | - | |
Viun9g02309 | 789 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 579 | 591 | IPR008271 | GO:0004672|GO:0006468 | |
Viun9g02309 | 789 | Pfam | Protein tyrosine and serine/threonine kinase | 462 | 728 | IPR001245 | GO:0004672|GO:0006468 | |
Viun9g02309 | 789 | SUPERFAMILY | Protein kinase-like (PK-like) | 442 | 739 | IPR011009 | - | |
Viun9g02309 | 789 | Gene3D | Phosphorylase Kinase; domain 1 | 426 | 533 | - | - | |
Viun9g02309 | 789 | Gene3D | Laminin | 280 | 332 | - | - | |
Viun9g02309 | 789 | FunFam | Wall-associated receptor kinase 2 | 534 | 751 | - | - | |
Viun9g02309 | 789 | SUPERFAMILY | EGF/Laminin | 329 | 369 | - | - | |
Viun9g02309 | 789 | Gene3D | Laminin | 333 | 371 | - | - | |
Viun9g02309 | 789 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 | 37 | 734 | IPR045274 | GO:0007166 | |
Viun9g02309 | 789 | Pfam | Calcium-binding EGF domain | 331 | 369 | IPR001881 | GO:0005509 | |
Viun9g02309 | 789 | ProSiteProfiles | Protein kinase domain profile. | 458 | 740 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun9g02309 | 789 | ProSitePatterns | Spider toxin CSTX family signature. | 335 | 361 | IPR011142 | - | |
Viun9g02309 | 789 | FunFam | Wall-associated receptor kinase 2 | 428 | 533 | - | - | |
Viun9g02309 | 789 | ProSiteProfiles | EGF-like domain profile. | 331 | 368 | IPR000742 | - | |
Viun9g02309 | 789 | SMART | serkin_6 | 458 | 731 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun9g02309 | Viun-Chr9 | 32555609 | 32558905 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun9g02309 | 18 | 739 | Receptor kinase-like Gene Family | AT1G21230 | 42.350 | 0.0 | 551 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK | Viun9g02309 | PK_Tyr_Ser-Thr | 1.9e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun9g02309 | - | - | vum:124835050 | 1180.24 |