Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02295 ATGTCCAAGCAAACAGTAACCAAAAACTGTCTTCATGTTCCTCGTACTCTTCCCCATGTTGGCACTGTCCAAGGCGGCATAGCATCCTTCCATTCATCTCTCTCTCCGAATATGCTCAAGCATATTATCTTGGTATTGTCTCAACCTCCACACCCAGAGAAACATCACTGGTGGCGCTGCTTTGCACAGACAAGGCATGAGAATGCTTCTGTCTTGATTATTTGGACGATCGTTTCTTCCATTCCACTTATCACGTTATTATGTGCTTTTCTGCATCATCACATTTCGTGTCAACGTTCGAGCTTTAACATCAATCATCACAAGACGTGCAGTGCTGCTAATTTGAGTATGGAAAGCCCTCCTACTCCTTCTTACGTCGTGGTTGCATGTGATGCCACAAGGGACCGCACTGAACACGAGATCAAACTCGTTGTTGATCATGTTCGGTCCAGGGGTTCCTTTCTCTCTCATGGTGACAAGTTGCTTGTGCTTTGTGTGTTGCACAAAGTGTCTCACCCCATGGGGTACCAGACGTTAGCATGTCCCGAGTCATTTTCTGGAACCAACTTTCGTACAATGGAGGAAGAAGTCAAAAAGAAAGTTGATACGTATGCTAGTGAGCTTTTATCAAGTTATGAAGATTTTGAAAGTGAAGGGGCTACTATTGAAATTAAAGTCACCGCAGGATTTCCAATTAAACAAGTTGTTCTGCAGGAGATTACAAACTATAATGCATCTTGGATAATACTTGACAGACATCTTCGGCGCGACCTGAGATACCACCTTAACAAGTTGCCATGTAAGGTTGCATTGGTTAAAGATGACCTGTCTCTGGAAATTTGGAAATCCCATAATACACATGACACAAAGGTCACAGCATCAAAGTTTGTATTTTCTTTGTCAAAGTTTGTGTCGCTGTCAGATTGTCATTGTATTGAAGACATTGAGAACTCAATTGTCTCTTTCAAAAGCTATCCCCATTCTATACTTTCTTCTGATACCAGTGCAACGATTAGGAGCTATACGAAGCAATCAAGTGTTAACAGGTCGCGCGATTACAGCTCCGTATCAGAATTCGGATCCTCTTCTAAGCAAGAAAGATCAGGCATAAGCACTAAAGGAGAATATAGGTATCTCACTAGTTCTCAGATTGACCAAAAGCAAAACCAGAGTGGTTTTCTGCCAAAACATTCAGATGCACCGCTTCTTTGCACTGGCTGTGGGACAAGAACTGAGTTATCTATCAAAGAGTCAATGAAGTTCAGCTACTCTGACATACAACTTGCGACAAATGATTTTTCAAAGGAGAACTTATTAGGTGAAGGTGGCTATGGTCACGTATACAAGGGCGTGCTTAAAGATGGACAGCAAATTGCGGCAAAGGTAAGGAAAGAAGAAAGCTCACAAGGATTTTCTGAATTTCATTCTGAGGTCTACGTCTTAAGTTTTGCTCGACACAAGAATATAGTGATGCTGTTGGGTTATTGTTGCAAAGAAAGGAAAAACATCCTCATTTATGAATATATTTGCAACAAGTCTCTCCATTGGCATTTATTTGAAAATAATGCAGCAGTTCTTGAGTGGCACCAGAGGTATGCTATTGCCATTGGAATTGCAAAGGGATTGCGTTTTCTACACGAGGAATGCCGTGGTGGTCCTATTATTCATCGCGACATGCGACCAAGCAACATACTTCTCACCCACGATATTGTTCCCATGCTAGGTGACTTTGGCCTTGCTAAATGGAAGACTGGTAATGAAACTCCTCAAACAAGGATAATGGGCACATTGGGATACCTTGCTCCTGAGTATGCTGAAGATGGTATTGTTTCTGAGGGAACGGATGTGTACTCTTATGGCATTATCCTGTTACAGTTGATATCAGGACGCCAGGTTGGCAATTCCAACAATCCAGAACAACAACAATCTCTCCGACAATGGGCTGAGCCAATGATAGAGAAGTTGGCCTTGCATGAACTGATTGACACTCGTCTAGCGGAATCATATGACACCTATGAACTCTACCTCATGGCTAAAGCAGCATACTTCTGTGTGCAAAGGAAGCCTGAGATGCGTCCCTCAATGGGAGAGGTTGTGCGACTTCTGGAGGGAGAAAGTAGCCACTTCCACTCGTTGGAAGATCAATTTGTACCTAATTTTAACGGCTAA 2169 0.426 MSKQTVTKNCLHVPRTLPHVGTVQGGIASFHSSLSPNMLKHIILVLSQPPHPEKHHWWRCFAQTRHENASVLIIWTIVSSIPLITLLCAFLHHHISCQRSSFNINHHKTCSAANLSMESPPTPSYVVVACDATRDRTEHEIKLVVDHVRSRGSFLSHGDKLLVLCVLHKVSHPMGYQTLACPESFSGTNFRTMEEEVKKKVDTYASELLSSYEDFESEGATIEIKVTAGFPIKQVVLQEITNYNASWIILDRHLRRDLRYHLNKLPCKVALVKDDLSLEIWKSHNTHDTKVTASKFVFSLSKFVSLSDCHCIEDIENSIVSFKSYPHSILSSDTSATIRSYTKQSSVNRSRDYSSVSEFGSSSKQERSGISTKGEYRYLTSSQIDQKQNQSGFLPKHSDAPLLCTGCGTRTELSIKESMKFSYSDIQLATNDFSKENLLGEGGYGHVYKGVLKDGQQIAAKVRKEESSQGFSEFHSEVYVLSFARHKNIVMLLGYCCKERKNILIYEYICNKSLHWHLFENNAAVLEWHQRYAIAIGIAKGLRFLHEECRGGPIIHRDMRPSNILLTHDIVPMLGDFGLAKWKTGNETPQTRIMGTLGYLAPEYAEDGIVSEGTDVYSYGIILLQLISGRQVGNSNNPEQQQSLRQWAEPMIEKLALHELIDTRLAESYDTYELYLMAKAAYFCVQRKPEMRPSMGEVVRLLEGESSHFHSLEDQFVPNFNG 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02295 722 Gene3D Transferase(Phosphotransferase) domain 1 510 716 - -
Viun9g02295 722 SUPERFAMILY Protein kinase-like (PK-like) 417 702 IPR011009 -
Viun9g02295 722 ProSitePatterns Tyrosine protein kinases specific active-site signature. 554 566 IPR008266 GO:0004672|GO:0006468
Viun9g02295 722 ProSitePatterns Protein kinases ATP-binding region signature. 439 461 IPR017441 GO:0005524
Viun9g02295 722 Gene3D HUPs 115 273 IPR014729 -
Viun9g02295 722 Pfam Protein kinase domain 434 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02295 722 Gene3D Phosphorylase Kinase; domain 1 406 508 - -
Viun9g02295 722 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 391 707 - -
Viun9g02295 722 ProSiteProfiles Protein kinase domain profile. 433 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02295 722 CDD STKc_IRAK 439 704 - -
Viun9g02295 722 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 405 508 - -
Viun9g02295 722 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 509 713 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02295 Viun-Chr9 32379449 32383267 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02295 421 703 Trihelix Transcription Factor Family AT5G38560 44.828 1.12e-77 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Viun9g02295 Pkinase 3.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02295 - - vun:114163670 1449.11