Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02287 ATGTCATTAGTTAGGTCTGCTGATGTAGCTCCCACACCGTATAAAAATGCCAAGTTCTTCTCACTAAAGGGAACCGATGTTAGACCAGGCTTGTCCTCTCAAATTTTTGGTCCTGATAAGCATAGGAGCATTTACATCACAGATTCTTACTCCAGCGAGAGTTATGAGAAGTACTTCCATGACTCTCAAACAGAAGAACTGATAGAACCATCGAACTCCAGCATCTCTGGAAGTTCAATCCCCCCTGATGTAGCCTCTTCTTACCAGCTTACAGCCAGTTCAGAAGCTTCTGTGGTTGCCAATAACCCATTTGATTGTTCTTTCATGTCCACAGTGACACACGATGTTTATGAGGCAAACTTTGGATCAGATTTGATGGAGAATGGAATCCTCGATTCCCGTGAAAATGATGGTCTAATGAGTTTAAAACTACAAGCATTGGAGAGGGCATTGCTTGATGATAGTGAGGCTGAGGAGGAAGACATATTTGAGGCTGTTCAAAGCATGGAAATTGATCCAGACATTGCTGAGTGGGATTCCATGCAGGATATGGTCCTCCATGATTCACCAAAGGAGTACTCTTCTTCAGACTCCAGCATCAGCAGCATCAGCAGCACCAAAGAAATATCACAAATTTCTCACACCCCAAAACAGCTGCTTTATGAATGTGCTATTGCACTTTCAGAAGGAAACGAAGAGGAAGGATCATCCATGATAAACAATCTCAGACAGATGGTGTCAATTCAAGGAGAGCCTTCTCAAAGAATCGCCGCCTATATGGTTGAGGGGCTTGCAGCTCGCCTAGCGGAATCTGGCAAAAGTATTTACAAAGCTCTGAGATGCAAGGAGCCACCTTCTTCAGATCGTCTAGCAGCCATGCAGATACTGTTTGAGGTTTGCCCATGTTTCAAATTTGGGTTTATTGCTGCTAACAATGCAATCACAGAAGCAGTGAAAGATGACATGAACATTCATATCATAGACTTTGACATCAACCAAGGAAGCCAGTACATTAATCTAATCCAAACACTTGCTTCAAGGTCAAGTAAGCCACATGTTAGATTGACAGGGGTTGATGATCCAGAGTCTGTGCAGAGAACTGTTGGAGGTCTCAAGAACATAGGACAAAGACTAGAAAAACTGGCAGAGGCACTTGGTTTACCATTTGAGTTCCGAGCAGTGGCATCAAGGACTTCCATTGTGACCCCATCAATGCTCAACTGTAGTCCTGGTGAAGCACTTGTGGTGAACTTTGCATTCCAGCTTCATCACATGCCTGATGAGAGTGTTTCAACCGTGAACGAACGGGACCAGCTTCTTCGGTTGGTGAAGAGCTTGAATCCAAAGCTTGTGACAGTTGTGGAGCAAGATGTGAACACAAACACCACCCCCTTCTTGCCTAGATTTGTTGAAGCCTACAATTACTACTCTGCTGTGTTTGAGTCGCTTGATGTTACTCTTCCAAGAGAAAGCCAGGACAGGATGAATGTTGAAAGACAGTGCTTGGCCAGAGACATTGTCAACGTTGTTGCATGTGAGGGCGAGGATAGGATAGAACGGTACGAAGTGGCAGGAAAATGGCGAGCGAGGATCACAATGGCTGGCTTCACTTCATCTCCAATGAGCACAAATGTTACTGATGAAATCCGAAACCTCATTAAGGTGATGTATTGTGACAGGTACAAGATAAAGGAGGAAATGGATGCTCTTCACTTTGGTTGGGAAGACAAAAACTTGATCGTTGCTTCGGCATGGAAGTTACCAAGATAA 1770 0.4412 MSLVRSADVAPTPYKNAKFFSLKGTDVRPGLSSQIFGPDKHRSIYITDSYSSESYEKYFHDSQTEELIEPSNSSISGSSIPPDVASSYQLTASSEASVVANNPFDCSFMSTVTHDVYEANFGSDLMENGILDSRENDGLMSLKLQALERALLDDSEAEEEDIFEAVQSMEIDPDIAEWDSMQDMVLHDSPKEYSSSDSSISSISSTKEISQISHTPKQLLYECAIALSEGNEEEGSSMINNLRQMVSIQGEPSQRIAAYMVEGLAARLAESGKSIYKALRCKEPPSSDRLAAMQILFEVCPCFKFGFIAANNAITEAVKDDMNIHIIDFDINQGSQYINLIQTLASRSSKPHVRLTGVDDPESVQRTVGGLKNIGQRLEKLAEALGLPFEFRAVASRTSIVTPSMLNCSPGEALVVNFAFQLHHMPDESVSTVNERDQLLRLVKSLNPKLVTVVEQDVNTNTTPFLPRFVEAYNYYSAVFESLDVTLPRESQDRMNVERQCLARDIVNVVACEGEDRIERYEVAGKWRARITMAGFTSSPMSTNVTDEIRNLIKVMYCDRYKIKEEMDALHFGWEDKNLIVASAWKLPR 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02287 589 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 192 581 IPR005202 -
Viun9g02287 589 Pfam GRAS domain family 217 586 IPR005202 -
Viun9g02287 589 ProSiteProfiles GRAS family profile. 207 586 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02287 Viun-Chr9 32263950 32267558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02287 1 586 GRAS Transcription Factor Family AT1G21450 60.642 0.0 677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Viun9g02287 GRAS 2.1e-133 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02287 - - gmx:100798897 1009.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02287 9 32263950 32267558 Viun9g02287 9 32263950 32267558 ECH
Viun8g00978 8 10807926 10811583 Viun9g02287 9 32263950 32267558 PCT