Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02239 ATGGACAACATGGGAGACCCAAAGAGCATCGTACAAGAGCTGCTACAAGGTTTGGAGTTGGCAAGGCAGCTTCAAGTGTGTCTCCACACACCTTCTTCGTCCCAAGAAACCCGTGACCTCCTCATCCACAACATCATTTCCACCTTCGAAAAGGCTCTTGAAATGGTAAATTGGAAAGGGCCACTTCCTGCCGCTGAATCATCACAACTGCCCCTAGCAGCCGCAATCCGAATGTCAGATTCACCTATCAGCAGTAGTCCCCGAAGTGAAGACTCCGAGAGAGATTTGAAGGACCAAGACCACAATGCTTTCAAAAAAAGAAACACTTTGCCGAGATGGACAAAAAGGATTCGGGTTACACCAGGAATGGCGGTGGAAGGGCCTCTTGATGATGGATATAGTTGGAGAAAATATGGTCAGAAAGACATCCTCGGAGCCATGTACCCCAGGGGCTATTACAGATGTACCCACAGGACTGTGCAAGGTTGCATGGCAACCAAGCAAGTGCAAAGATCTGACGAAGACCCTACAATTTTTGAAATCAATTACCGAGGAAAGCACACCTGCACGGTGGCCCACACCGCGGCTACTTCTTCAGTAATTCCATTAGAAAACCAAGAACCAACTCTGAACAACACAAATCAGCAGCAGAATATCTTGCAGAGCCTTGAACAGCAACCGAATGATTTACTTTTGAGTCTCCGAGAAGGGTTGAGAGTCCAAACACAGAACCTAGATTCCACTGACCAATCATTTTCTCCATTCCGTTTCCCTTTATCAACGAACATAAAAAATGAAGGTCAAGTTTTCCCTCCCCATGTGCTTGAAAATTTCGGTTCGCCTTATATGTCGCCTGCTACATCCGGAATCAGCCACTTTTCTGTGTCTCCGAGTGGGGTGAACAGTTTTGGAGGGAACCCAAATCTGGGAACTTTTGAGTCTCATATCAATGACATGATCCCACCTGCTACTTCAGCTCCAAACTCAGCTGCTGTTGCTTTAGAGTTTCCTTTCAACCAGTTTAATTTTGATGGTCAGAACTTCAGATTCGATAACCCATGA 1062 0.4614 MDNMGDPKSIVQELLQGLELARQLQVCLHTPSSSQETRDLLIHNIISTFEKALEMVNWKGPLPAAESSQLPLAAAIRMSDSPISSSPRSEDSERDLKDQDHNAFKKRNTLPRWTKRIRVTPGMAVEGPLDDGYSWRKYGQKDILGAMYPRGYYRCTHRTVQGCMATKQVQRSDEDPTIFEINYRGKHTCTVAHTAATSSVIPLENQEPTLNNTNQQQNILQSLEQQPNDLLLSLREGLRVQTQNLDSTDQSFSPFRFPLSTNIKNEGQVFPPHVLENFGSPYMSPATSGISHFSVSPSGVNSFGGNPNLGTFESHINDMIPPATSAPNSAAVALEFPFNQFNFDGQNFRFDNP 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02239 353 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 230 IPR044810 GO:0003700
Viun9g02239 353 MobiDBLite consensus disorder prediction 87 107 - -
Viun9g02239 353 Gene3D WRKY domain 119 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun9g02239 353 ProSiteProfiles WRKY domain profile. 124 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun9g02239 353 FunFam WRKY transcription factor 53 115 192 - -
Viun9g02239 353 SMART WRKY_cls 129 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun9g02239 353 Pfam WRKY DNA -binding domain 130 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun9g02239 353 MobiDBLite consensus disorder prediction 79 107 - -
Viun9g02239 353 SUPERFAMILY WRKY DNA-binding domain 127 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02239 Viun-Chr9 31838490 31840343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02239 8 269 WRKY Transcription Factor Family AT4G23810 38.621 3.89e-53 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun9g02239 WRKY 4.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02239 - - gmx:100776906 526.168