Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02226 ATGAATTATATATTTCTCCTCCTTGTCACATTCAAGATTATCAAGAAGAAGTTGATGCAGTTAAAAGAGATTATGGGATTTCAAACAGCACATTCTCATGGTGCTAAATGGATACCACAACCAATTTTCAAAGGAAAGGAAGTCCCAATTGATGTTCAGGAAAACTCATTATTTCAAAAGACTACACTGAATTTCATTGAGCATTCCCAATCCAATTCCAACTACATTTTGTCTGGATATGATTCATGGATGGTAAGACACCCTTCAGCACTGAACTCATTTGAAAGGTTGATGAAAAACGCCATAGGGAAAAGGATCATCCTTTTTCTGGATTATGATGGTACCTTATCCCCAATTGTGAATGATCCTGATCGTGCTTTCATGTCTGAAGAGATGCGTGCTACAGTACATGAAGTTGCTACCTATTTTCCAACAGCAATAATTAGTGGAAGAAGCAGAGATAAAGTACAAGATTTCGTGAAGTTGAACAATTTGTATTATGCTGGGAGCCATGGCATGGACATAATGGCACCATCAATGCCAATTACATCTTCTGCAGGGGAGCATATTGAGATTGCCATTAACAAAAGCTGCACTGAAGTTCCTTTTCAACCTGCCAAGAAGTATTTGCCTGCAATTAGAGAGATACTAAGAATACTAAAGAATGAAGTAGAGGAAATCAAAGGAGCAATGGTTGAGGACAACGGATTCTGCGTCTCTGTACACTTCCGGCAGGTCCAAGAAAAGGATTATGGATTTTTGGAAGAGAAAGTGAAGTGTGTGCTTGAAAATCATCCACAATTTTGCTTGACAGAGGGTAAAAAGGTTATGGAAATAAGGCCCTCTATAAAGTGGAACAAAGGAAATGCTGTAGAATATTTTCTTGACACATTAGGATTAAGCAGTTGCAATGATATCCTTCCTGTGTATATTGGCGATGATAGAACTGATGAAGATGCTTTTAAGGTGATACAGAGTAGAGAGCAAGGTTATCCAATCATAGTGTCTTCAGTTCCAAGAGAAACTAGGGCTTTGTACTCCTTGCGCGACCCATCGGAAGTACTAATGTTTTTGTCAAGTTTGGCAAAATGGAGGAAAAACGCTTACTAA 1110 0.3847 MNYIFLLLVTFKIIKKKLMQLKEIMGFQTAHSHGAKWIPQPIFKGKEVPIDVQENSLFQKTTLNFIEHSQSNSNYILSGYDSWMVRHPSALNSFERLMKNAIGKRIILFLDYDGTLSPIVNDPDRAFMSEEMRATVHEVATYFPTAIISGRSRDKVQDFVKLNNLYYAGSHGMDIMAPSMPITSSAGEHIEIAINKSCTEVPFQPAKKYLPAIREILRILKNEVEEIKGAMVEDNGFCVSVHFRQVQEKDYGFLEEKVKCVLENHPQFCLTEGKKVMEIRPSIKWNKGNAVEYFLDTLGLSSCNDILPVYIGDDRTDEDAFKVIQSREQGYPIIVSSVPRETRALYSLRDPSEVLMFLSSLAKWRKNAY 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02226 369 FunFam Trehalose 6-phosphate phosphatase 211 369 - -
Viun9g02226 369 Pfam Trehalose-phosphatase 109 352 IPR003337 GO:0003824|GO:0005992
Viun9g02226 369 Gene3D - 106 202 IPR023214 -
Viun9g02226 369 Gene3D - 208 369 IPR023214 -
Viun9g02226 369 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 75 367 IPR044651 GO:0004805|GO:0005992
Viun9g02226 369 NCBIfam HAD-IIB family hydrolase 107 324 IPR006379 -
Viun9g02226 369 CDD HAD_TPP 108 354 - -
Viun9g02226 369 FunFam Trehalose 6-phosphate phosphatase 106 192 - -
Viun9g02226 369 NCBIfam trehalose-phosphatase 184 362 IPR003337 GO:0003824|GO:0005992
Viun9g02226 369 SUPERFAMILY HAD-like 107 366 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02226 Viun-Chr9 31697913 31705491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02226 104 362 Trehalose Biosynthesis Gene Families AT1G70290 26.909 2.52e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02226 K01087 - gmx:100819120 608.601