Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02225 ATGATGGAGTGCAACAAAGATGAGGCAGTTAGGGCCAAAGAAATAGCAGAGAGGAAATTTTCAGAAAGGGAATATGTTGGTGCAAAGAAATTTGCTCTCAAGGCTCAAAATCTGTATCCTGATTTGGAGGATATTACCCAGCTTTTGACAACGATTGATATTTATATATCTGCTGAGAATAAAGTAAGTGGAGAAATGGATTGGTATGGTATACTTGGAGTGAGTCCCTTTGCTGACGAGGAGATTGTCAGGAAGCAATACAGGAAGCTGGCTCTCACCCTTCACCCTGACAAAAACAAGTCTTTGGGCGCAGAGGGTGCATTTAAGCTGGTTTCAGAGGCATGGAGTTTGTTATCAGATAAGACCAAGAGACTCGAGTATAACCAGAAGAGGAGTTTGAAAGGATTCCAGCATAATACTTCCAACCATGTTGGATCTAAGTCAGATGCACCCAGTTCAAATGGTTTTTACAATTTAAAGAAGAATGTCACTTCAAATGTCAGGACTGGAAATAATAATGGTCGGGCACCTTCAACTGCTGTTCCTCCTCCACATAAAAAGGCTGATACCTTTTGGACTATCTGCAACCGGTGCAGGACACATTATGAATATCTCAGGATTTATTTGAATCACACCCTTTTATGTCCAAACTGTAATGAAGCTTTTGTTGCTGTGGAGAGGGGTCCACCACCAAATGTTTTTAAGCCAACAAATTGGTCTTCTCATCAACAACGACATCAAAATTCTCAACACCATGCTGGAAGTAATAATACAAACTTTCAGTGGGGTTCTCACAATAGAATGGCTGGTTTTGGTAGCACAGACGGATCAACATCTGTTGCAGCTCAAGCAGCAAGTGTTGTGCAGCAGGCAAGTGAGAAAGTAAGGAGAGAGGGTTCTTTTCACAAAGCTGAAAAACCTATGAAAAAAAGGAGGACAGATGATATTCGAATTAATGGCTATCAAGGATACATGGCTAATCATATGACTGGGGGACATGGAGCAGCTGGCTTGGGAAGCTTTTCTGACTCAGGAAAGGCCAACTTGGAAGCAGAAAGGAATTATGGTTTTTCTGGTCTGCCTGGCAAGCATTACAGCACAAGGGAATTGTCAATGTTTGAATTACGAAACATGTTGATGGACAAGTCACGCAATGTAATTCGTAAGAAACTTCAAGAATTGAAAGCAATGGCTGAAGCTAAGATTAACAGGGATAAAGAAAATAAGAGACAGAAAAGCACATTAACAACTGGTTCAGAAAAGCTGAGAGAGCCTGCTGTCAATGGTAACAGGCATGCAAACATGGATTCTTTCCCTGTCAGAAGTGATCAAGCTTATGTTACCATCAATGTTCCAGACCCTGATTTTCATAACTTTGATTTGGACAGAGATGAAAATTCCTTTGCTGAGGACCAGGTGTGGGCTGCGTACGATGATGATGATGGAATGCCTCGATATTATGCTAGAATTCACAAGGTGATCTCTATAAAGCCCTTTAAAATGCGGATCAGTTGGCTTAATTCTCGAAGCAACAGTGAATTGGGCCCAATAGATTGGGTGGGCTCTGGTTTTTATAAGACTTGTGGGGATTTCAGAACTGGCAAGCATGAAATATCTGAATCATTAAATTCTTTCTCTCACAAGGTTAGGTGGACAAAAGGCCTTAGAGGTGTTGTTCGCATCTTTCCTGGAAAGGGGGAAGTCTGGGCTCTTTACAGGAACTGGTCTCCTGATTGGAATGAACACACCCCAGATGAAGTGATACACAAGTATGATATGGTGGAGGTGCTCGAAGATTTCAATGAAGAACATGGCATATTAGTTACCCCTCTAGTTAAGGTGTCTGGTTTTAGGACTGTGTTTCAAAGGCATGCAGATCGTGATCAGGAGAGGAGGATTCTTAAAGAGGAGATGTTTCGATTCTCTCATCAGGTTCCTAATTGCTTGTTGACTGGCCAAGAAGCTCAGAATGCTCCAAAGGGTTGTCGAGAGTTGGATCCAGCCGCTACTCCTTTAGACCTCCTTCAGATAACCACAGAAGCTAATGAGATATCAGATAATGCATAG 2067 0.419 MMECNKDEAVRAKEIAERKFSEREYVGAKKFALKAQNLYPDLEDITQLLTTIDIYISAENKVSGEMDWYGILGVSPFADEEIVRKQYRKLALTLHPDKNKSLGAEGAFKLVSEAWSLLSDKTKRLEYNQKRSLKGFQHNTSNHVGSKSDAPSSNGFYNLKKNVTSNVRTGNNNGRAPSTAVPPPHKKADTFWTICNRCRTHYEYLRIYLNHTLLCPNCNEAFVAVERGPPPNVFKPTNWSSHQQRHQNSQHHAGSNNTNFQWGSHNRMAGFGSTDGSTSVAAQAASVVQQASEKVRREGSFHKAEKPMKKRRTDDIRINGYQGYMANHMTGGHGAAGLGSFSDSGKANLEAERNYGFSGLPGKHYSTRELSMFELRNMLMDKSRNVIRKKLQELKAMAEAKINRDKENKRQKSTLTTGSEKLREPAVNGNRHANMDSFPVRSDQAYVTINVPDPDFHNFDLDRDENSFAEDQVWAAYDDDDGMPRYYARIHKVISIKPFKMRISWLNSRSNSELGPIDWVGSGFYKTCGDFRTGKHEISESLNSFSHKVRWTKGLRGVVRIFPGKGEVWALYRNWSPDWNEHTPDEVIHKYDMVEVLEDFNEEHGILVTPLVKVSGFRTVFQRHADRDQERRILKEEMFRFSHQVPNCLLTGQEAQNAPKGCRELDPAATPLDLLQITTEANEISDNA 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02225 688 MobiDBLite consensus disorder prediction 402 435 - -
Viun9g02225 688 PRINTS DnaJ domain signature 87 102 IPR001623 -
Viun9g02225 688 PRINTS DnaJ domain signature 69 87 IPR001623 -
Viun9g02225 688 PRINTS DnaJ domain signature 103 123 IPR001623 -
Viun9g02225 688 SMART dnaj_3 66 123 IPR001623 -
Viun9g02225 688 MobiDBLite consensus disorder prediction 402 417 - -
Viun9g02225 688 MobiDBLite consensus disorder prediction 291 311 - -
Viun9g02225 688 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Viun9g02225 688 CDD DnaJ 67 120 IPR001623 -
Viun9g02225 688 Gene3D DnaJ domain 64 175 IPR036869 -
Viun9g02225 688 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Viun9g02225 688 Pfam Domain of unknown function (DUF3444) 448 654 IPR024593 -
Viun9g02225 688 MobiDBLite consensus disorder prediction 136 157 - -
Viun9g02225 688 MobiDBLite consensus disorder prediction 295 311 - -
Viun9g02225 688 PANTHER BNAC03G44070D PROTEIN 2 671 - -
Viun9g02225 688 SUPERFAMILY Chaperone J-domain 58 127 IPR036869 -
Viun9g02225 688 Coils Coil 388 408 - -
Viun9g02225 688 Pfam DnaJ domain 67 128 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02225 Viun-Chr9 31654695 31659415 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02225 5 230 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.197 3.03e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02225 - - gmx:100814722 1272.69