Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02207 ATGAAAATCCCCAATCCCATACTCACGCTCTTCATCCTCTTGAACCCTCCACTAGTACTGGCAAACATAGAAACATGTTCAGACAGCGTTTGCCAGAGTGGTGAGCCAGTGATCCGATTCCCCTTCCGCATAGAAGGAAAACACGCAGAAGCATGCGGATACCCAGGCTTCATAGTCTCCTGCAACCAGAACCCCCAAACACTCCTCAACCTACCAAATTGGGACCCACTCAAAATCCAAACGATAAACTACGCCGCTCAGCAACTGTGGGTCAACGATCCCGGCAACTGCCTCCCCAAACGCCTCCTCTCTCTCAATCTCTCCGCCTCTCCCTTCCGCGCCGTTTACCACCAGCAGTTCACCTTCTTCAACTGCTCCGTCAATTTGCCGAACCTCGTTCGTCGATACCGTCCCATAGGTTGCCTCAGCGATCCTCCCAAGTACGCCGTTTTCGCCACGCCTTCTACGACTGTGGTTAGCCACTTGTCTTCCGTCTGTGATTTAGTGGCCACGGTGAAGGTGCCTGTGCAGTCACCGTTTTACGATCAAGTCACATCGTCGGAACTCGGCGAGGATCTGCGTCTCACGTGGGAATCGCCGGCGTGCGGGAGGTGCGAGTCCCACGGTGGCCGGTGCGGCTTCAGGAGTGACGACACTTTTGAGCTTGATTGCTTTGGTTTTCCTTCGAAAGGGATTTCTCGTGGTGCCCGTTACGCCATAGCCATATGCATAGGGGTACCAGCAATGTTATGCTCCTTTGGAGTATTGAGTTGCATCTGCAGCTGGCTCAAAATGAGGAATCATGATGGACCTTGGGCTCACGAAACTGTGGCAGATTTTGAGGCTCTAGCGGGCTCAAGGCCCACATCAGTGTCGGGCCTGGACAGACCCACAATCGAATCGTACCCAAAAATAGTCATAGGTGAGAACAGACGGTTACCGAAGAAGAGTGAGAAAACGTGCTCAATATGTCTGTCAGAGTACATGCCAAAAGAGACAGTGAAAAGCATACCTGAATGCGGACACTGCTTTCATGCACAATGCATCGATGAATGGCTTCCACTGAACGCTTCGTGCCCAATTTGCCGAACTTCTCCCCGAAAGTTTCCACAACCGCGTGCTCGATCATCACCATAA 1137 0.5224 MKIPNPILTLFILLNPPLVLANIETCSDSVCQSGEPVIRFPFRIEGKHAEACGYPGFIVSCNQNPQTLLNLPNWDPLKIQTINYAAQQLWVNDPGNCLPKRLLSLNLSASPFRAVYHQQFTFFNCSVNLPNLVRRYRPIGCLSDPPKYAVFATPSTTVVSHLSSVCDLVATVKVPVQSPFYDQVTSSELGEDLRLTWESPACGRCESHGGRCGFRSDDTFELDCFGFPSKGISRGARYAIAICIGVPAMLCSFGVLSCICSWLKMRNHDGPWAHETVADFEALAGSRPTSVSGLDRPTIESYPKIVIGENRRLPKKSEKTCSICLSEYMPKETVKSIPECGHCFHAQCIDEWLPLNASCPICRTSPRKFPQPRARSSP 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02207 378 SMART ring_2 321 362 IPR001841 -
Viun9g02207 378 Pfam Wall-associated receptor kinase galacturonan-binding 26 93 IPR025287 GO:0030247
Viun9g02207 378 SUPERFAMILY RING/U-box 314 366 - -
Viun9g02207 378 CDD RING-H2_EL5-like 321 363 - -
Viun9g02207 378 ProSiteProfiles Zinc finger RING-type profile. 321 363 IPR001841 -
Viun9g02207 378 Pfam Wall-associated receptor kinase C-terminal 163 225 IPR032872 -
Viun9g02207 378 Pfam Ring finger domain 320 363 IPR001841 -
Viun9g02207 378 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 284 367 IPR013083 -
Viun9g02207 378 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 10 366 IPR046948 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02207 Viun-Chr9 31531413 31534706 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02207 24 366 C3H Transcription Factor Family AT2G46495 37.006 1.87e-68 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02207 - - vun:114163980 775.393