Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02190 ATGTCAGAGTATGATTTGGCAGCAGAGGGAGATCTGTTCAAAGCTCCTGAACCTATTATTGAAGAGCCAATCATGGACCTGGATCCCATGACCATCTCAATGATGTCTTGTGGGGAAGATGTTTCCTCTCAGGGACTAAAATCCACTGATATTGATATTCTTCAGAATGATCAATTTCTGAGTGAGGTATTCTATGAATGCAAAAAGGATCTCTTAGAAAAGGCTGCAATAGAGTCACCACTCTCTGAGATTCTGGAAATCAAGGTTCCTCTTCTGAACATTGATGAAAACTCAATTCAAGAAAACAAGTCACTTCCTGACATGCAGTTGGGAAAGAGTGTCAGTTCAGGAAGTTTAAGCTCAATGGAATGGATTCGTGGAGCTGCAATGAAGCCTGCTTTCATTGATATCCCTGCAATGGATTTCAATGCAGTTTATGGCATGCGAAGATCGTTTAGTGAAGGAGATATAAAGACTCTGGGTAACGGAAACATGAACATTGTTCAATCACCCGTTGAGAGGCCCTTTCTCATCTGCAACTGCACCAGTGAGGAACGCTTCCAAAAGCTCTCCAGGTACAGGAATAAGAGGACAAAGAGGAACTTTGGGAGGAAAATCAAGTATGCATGCAGGAAGGCTCTTGCTGACAGTCAACCAAGAATCCGTGGAAGATTTGCAAGAAGTGAAGAATGTGAGAGCAAGAGGGAATGA 711 0.4262 MSEYDLAAEGDLFKAPEPIIEEPIMDLDPMTISMMSCGEDVSSQGLKSTDIDILQNDQFLSEVFYECKKDLLEKAAIESPLSEILEIKVPLLNIDENSIQENKSLPDMQLGKSVSSGSLSSMEWIRGAAMKPAFIDIPAMDFNAVYGMRRSFSEGDIKTLGNGNMNIVQSPVERPFLICNCTSEERFQKLSRYRNKRTKRNFGRKIKYACRKALADSQPRIRGRFARSEECESKRE 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02190 236 ProSiteProfiles CCT domain profile. 186 228 IPR010402 GO:0005515
Viun9g02190 236 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 100 230 IPR045281 GO:0009909
Viun9g02190 236 Pfam CCT motif 186 228 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02190 Viun-Chr9 31414221 31417629 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02190 182 233 C2C2-CO-like Transcription Factor Family AT5G57660 50.000 1.63e-09 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Viun9g02190 CCT 2.4e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02190 - - gmx:100814332 419.468