Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02189 ATGTATGCTGAAACTGGTCTTCTCTTCCCATATTTGCACAACCTCTCTCAAGAGCTTCACCAGCTTGAGGAGTACTGCAAAACCCAGAAGTACAATGCTCCAATGGATGAGCTTGTTCAGTGTTCTGCCATGTCAGAGTATGATTTGGCAGCAGAGGGAGATCTGTTCAAAGCTCCTGAACCTATTATTGAAGAGCCAATCATGGACCTGGATCCCATGACCATCTCAATGATGTCTTGTGGGGAAGATGTTTCCTCTCAGGGACTAAAATCCACTGATATTGATATTCTTCAGAATGATCAATTTCTGAGTGAGGTATTCTATGAATGCAAAAAGGATCTCTTAGAAAAGGCTGCAATAGAGTCACCACTCTCTGAGATTCTGGAAATCAAGGTTCCTCTTCTGAACATTGATGAAAACTCAATTCAAGAAAACAAGTCACTTCCTGACATGCAGTTGGGAAAGAGTGTCAGTTCAGGAAGTTTAAGCTCAATGGAATGGATTCGTGGAGCTGCAATGAAGCCTGCTTTCATTGATATCCCTGCAATGGATTTCAATGCAGTTTATGGCATGCGAAGATCGTTTAGTGAAGGAGATATAAAGACTCTGGGTAACGGAAACATGAACATTGTTCAATCACCCGTTGAGAGGCCCTTTCTCATCTGCAACTGCACCAGTGAGGAACGCTTCCAAAAGCTCTCCAGGTACAGGAATAAGAGGACAAAGAGGAACTTTGGGAGGAAAATCAAGTATGCATGCAGGAAGGCTCTTGCTGACAGTCAACCAAGAATCCGTGGAAGATTTGCAAGAAGTGAAGAATGTGAGAGCAAGAGGGAATGA 840 0.431 MYAETGLLFPYLHNLSQELHQLEEYCKTQKYNAPMDELVQCSAMSEYDLAAEGDLFKAPEPIIEEPIMDLDPMTISMMSCGEDVSSQGLKSTDIDILQNDQFLSEVFYECKKDLLEKAAIESPLSEILEIKVPLLNIDENSIQENKSLPDMQLGKSVSSGSLSSMEWIRGAAMKPAFIDIPAMDFNAVYGMRRSFSEGDIKTLGNGNMNIVQSPVERPFLICNCTSEERFQKLSRYRNKRTKRNFGRKIKYACRKALADSQPRIRGRFARSEECESKRE 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02189 279 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 143 273 IPR045281 GO:0009909
Viun9g02189 279 Coils Coil 271 279 - -
Viun9g02189 279 ProSiteProfiles CCT domain profile. 229 271 IPR010402 GO:0005515
Viun9g02189 279 Pfam CCT motif 229 271 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02189 Viun-Chr9 31413123 31417629 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02189 225 276 C2C2-CO-like Transcription Factor Family AT5G57660 50.000 2.29e-09 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Viun9g02189 CCT 3.1e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02189 - - gmx:100814332 488.034