Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02185 ATGGTAATGGACTACGGAAGACTGGGACCCTCTCAGCCCATCAATCCAAGATCTTCCGGGAAGAAGAAAATCGCCTTGCTGTCACTCTTTGGAGTCATACTCATAGCAGCATCGGCGGTTACGGCCGTTGCGCTACTCTCTCAAACCAGAACAACAACGGATCGTTCAAGGCTTCGTGGAAAGCCTACGCAAGCCATTTCACGCACGTGCAGTAAAACGCGATTTCAGACTGTTTGCGTCAATTCGCTGCTCGACTTTCCCGGATCCCAGGCCGCATCGGAGAAGGACCTCCTTCACATTTCCTTCAATGTCACGCTGCAGCACTTCTCAAAGGCGCTCTACACTTCGGCTGCAATTTCCTACGCCACCATGGATCCCCGCGTTCGTGCCGCTTACGACGATTGTCTCGAACTCCTTGACGATTCTGTTGACGCGCTTGCGCGCTCCCTCAGCACTGTCTCCCTTGGTGCTGTTGGCTCCGCCAGCGAAGATGTACTCACATGGCTCAGCGCTGCGCTCACCAACCAGGACACCTGTGCGGAGGGCTTTGCCGACGCCGCCGGTCCGGTGAAGGACCAGATGAACAACAACCTCAAGGACTTGTCGGAGCTCGTCAGCAATTGCCTCGCCATTTTCTCTGCTGCGGCCAACGGCGACGACTTTGCCGGCGTTCCCATTCAGAACAGGAGACGGTTGATGACAATGCGAGCTGATAATTTCCCCAGATGGTTGAATCGACGAGATAGAAGATTACTGACCTTGCCTCTGTCCGCGATACAAGCCGATATTGTGGTTTCCAAGGACGGTAACGGAACCGTTAAGACCATCGCCGATGCCATTAAGAAGGTCCCGGAATACAGTTCACGCCGCTTCATTATCTACGTCAGGGCAGGAAGGTATGAAGAAGAGAATTTAAAGTTGGGGAGGAAGAAAACAAATGTGATGTTCATAGGAGATGGTAAGGGCAAAACCGTCATCACAGGAGGAAAAAATTATTATAACAACCTCACCACGTTCCACACGGCATCCTTTGCTGCTAGCGGTTCTGGTTTCATCGCCAAGGACATGACATTCGAAAACTATGCCGGACCGGAGAAGCACCAAGCTGTGGCTCTCCGTATCGGAGCAGATCACGCCGTGGTGTACCGTTGCAACGTTATCGGATACCAAGACACCATGTATGTCCATTCTAACCGTCAATTTTTCCGCGAATGTGACATTTATGGGACTGTCGATTTCATATTCGGCAATGCCGCCGTGGTCTTCCAGAATTGTAGTCTTTGGGCCCGCAAGCCCATGGCACAACAAAAGAACACTATTACGGCCCAAAATCGCAAAGACCCAAATCAGAACACAGGCATTTCCATCCACAACTGTCGGATCCTTGCCGCATCGGATCTAGAAGCATCCAAGGGTAGTTATCCAACTTATTTGGGTCGTCCATGGAAACTTTATGCTAGAACGGTATACATGTTATCTTACATAGGAGATCATGTGCACCCACGTGGATGGCTGGAGTGGAATATATCGTCGTTTGCTTTAGACACGTTGTATTATGGTGAATACATGAATTTTGGACCGAGTGCAGCTTTGGGACAACGAGTGAAATGGTCTGGATACCGGGTCATCAATTCCACCGATGAAGCTTCTAAATTCACGGTAGCACAATTCATATCAGGCTCCTCGTGGTTACCATCTACTGGAGTTTCATTCCTTGCTGGGTTATCAACTTAA 1734 0.5017 MVMDYGRLGPSQPINPRSSGKKKIALLSLFGVILIAASAVTAVALLSQTRTTTDRSRLRGKPTQAISRTCSKTRFQTVCVNSLLDFPGSQAASEKDLLHISFNVTLQHFSKALYTSAAISYATMDPRVRAAYDDCLELLDDSVDALARSLSTVSLGAVGSASEDVLTWLSAALTNQDTCAEGFADAAGPVKDQMNNNLKDLSELVSNCLAIFSAAANGDDFAGVPIQNRRRLMTMRADNFPRWLNRRDRRLLTLPLSAIQADIVVSKDGNGTVKTIADAIKKVPEYSSRRFIIYVRAGRYEEENLKLGRKKTNVMFIGDGKGKTVITGGKNYYNNLTTFHTASFAASGSGFIAKDMTFENYAGPEKHQAVALRIGADHAVVYRCNVIGYQDTMYVHSNRQFFRECDIYGTVDFIFGNAAVVFQNCSLWARKPMAQQKNTITAQNRKDPNQNTGISIHNCRILAASDLEASKGSYPTYLGRPWKLYARTVYMLSYIGDHVHPRGWLEWNISSFALDTLYYGEYMNFGPSAALGQRVKWSGYRVINSTDEASKFTVAQFISGSSWLPSTGVSFLAGLST 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02185 577 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 64 213 IPR035513 -
Viun9g02185 577 ProSitePatterns Pectinesterase signature 2. 407 416 IPR033131 -
Viun9g02185 577 NCBIfam pectinesterase inhibitor domain 40 213 IPR006501 GO:0004857
Viun9g02185 577 CDD PMEI-like_3 70 217 - -
Viun9g02185 577 Pfam Plant invertase/pectin methylesterase inhibitor 65 211 IPR006501 GO:0004857
Viun9g02185 577 SMART PMEI_2 61 211 IPR006501 GO:0004857
Viun9g02185 577 FunFam Pectinesterase 62 215 - -
Viun9g02185 577 PANTHER PECTINESTERASE 38 565 - -
Viun9g02185 577 Gene3D - 256 575 IPR012334 -
Viun9g02185 577 FunFam Pectinesterase 256 575 - -
Viun9g02185 577 Gene3D Invertase/pectin methylesterase inhibitor family protein 63 215 IPR035513 -
Viun9g02185 577 Pfam Pectinesterase 262 560 IPR000070 GO:0030599|GO:0042545
Viun9g02185 577 SUPERFAMILY Pectin lyase-like 257 574 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02185 Viun-Chr9 31347686 31351836 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02185 3 576 Carbohydrate Esterase AT5G53370 65.932 0.0 811
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02185 - - gmx:100776752 981.474