Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02163 ATGGGGAAGAAAGGAGCCAGCTGGTTTTCCTCCGTCAAAAAAGTTTTCAAATCCTCTTCCAATAAGGACTCGCCGCTGCCGGAGAAGAAGAAAGACAACAAGAAGGAAGACCAATGGCGGCAGCAGCAGCAGCAGGAGGAGGCGCCAGAGGAGGTGTCCCTGGAGCATTTTCCCGCCGAGAGTTCTCCTGATATTACCTATGAAGGGAGTGCCACGTCAACACCGGTGACTGAAGACAGAACCCATGCTATTGCCTTTGCAGCAGCAACTGCCGCCGCTGCCGAAGCCGCCGTAGCAGCTGCTCAAGCGGCCGCTAGAGTTGTGAGATTGGCCGGTTATGGACGCCAATCCACGGAAGAAAGAGCTGCGATACTCATTCAATCATACTACAGAGGTTACCTAGCTCGACGTGCTTTGCGGGCTTTGAAGGGATTGGTGAGGCTGCAGGCGCTTGTGAGGGGACACAATGTGAGAAAGCAAGCGCAGATGACAATGCGATGCATGCATGCGTTAGTCCGAGTACAGGCAAGAGTAAGAGCTCGAAGACTCCAGTTGACTCAAGAGAAGTTTCAGAGAAGAGTTGAGGAACAGGTGCAAAGAGGACTAGAGGAACAACAACAACCTAATTCTCTTTTGAGCCCCATCAAAATGTTAGACATGGATACATGGGACAACAGGCGCCAAAGTAGCCAACAGATTAAGGAGGATAATTTGAGGAAACATGAAGCTGCAATGAAGAGGGAGAGGGCTCTGGCTTACGCTTTCAACTGCCAGCAGCAGAAGCAAAATCCAAATGATGATGATATTGGAAGCTATGGCAATGAGCGTGAAAGAGCCCAAATGGATTGGAACTGGTTGGAACGCTGGATGTTATCACAATCACAGAACTCAAGGCACTTTGGGTCACGGGAGAGCCTTTATAGAACTCTTGCTACTGCAACTTCCACCACTGATGAAATGTCTGAAGAGAAAACAGTAGAAATTGACATGGCTGCAACTCTGGATTCAGCTCATGCTAACATGGGTCTCATCCACCGAGAATCTTTTGACACAAGCCCCATATCCAATAGGTACCACCAGCGCCACCACAGTGCAGGTGTACCTAGCTACATGGCCCCAACTCAGTCTGCAAAGGCCAAGGCCCGTAATCAAGGCCTGTTTAAGCATAGGGGCTCACCTGGGCCTCACTGGAACTCGTCCACGACGAGAAGTTCTGCTCTTGGGCTGGGCTGTGACTCATCTAGCTCTGGTGGGCCCACTGCAGCTCATGGGTTCCCAAGAAGTCCAACCCCAAAAATTAATGAAATTCGCCTCCAATCTAGACGGATTTCAAGTAGCAGCCCGGATAATGTTCACATTGAGGATTGGGCCCTTCCCCTTGGAACCGGTGGTTGGACTTGA 1401 0.5054 MGKKGASWFSSVKKVFKSSSNKDSPLPEKKKDNKKEDQWRQQQQQEEAPEEVSLEHFPAESSPDITYEGSATSTPVTEDRTHAIAFAAATAAAAEAAVAAAQAAARVVRLAGYGRQSTEERAAILIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMHALVRVQARVRARRLQLTQEKFQRRVEEQVQRGLEEQQQPNSLLSPIKMLDMDTWDNRRQSSQQIKEDNLRKHEAAMKRERALAYAFNCQQQKQNPNDDDIGSYGNERERAQMDWNWLERWMLSQSQNSRHFGSRESLYRTLATATSTTDEMSEEKTVEIDMAATLDSAHANMGLIHRESFDTSPISNRYHQRHHSAGVPSYMAPTQSAKAKARNQGLFKHRGSPGPHWNSSTTRSSALGLGCDSSSSGGPTAAHGFPRSPTPKINEIRLQSRRISSSSPDNVHIEDWALPLGTGGWT 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02163 466 MobiDBLite consensus disorder prediction 23 54 - -
Viun9g02163 466 Pfam Protein of unknown function (DUF4005) 352 393 IPR025064 -
Viun9g02163 466 MobiDBLite consensus disorder prediction 1 74 - -
Viun9g02163 466 MobiDBLite consensus disorder prediction 394 421 - -
Viun9g02163 466 ProSiteProfiles IQ motif profile. 119 147 IPR000048 GO:0005515
Viun9g02163 466 ProSiteProfiles IQ motif profile. 143 170 IPR000048 GO:0005515
Viun9g02163 466 Gene3D - 118 161 - -
Viun9g02163 466 Pfam IQ calmodulin-binding motif 146 161 IPR000048 GO:0005515
Viun9g02163 466 Pfam IQ calmodulin-binding motif 120 140 IPR000048 GO:0005515
Viun9g02163 466 PANTHER IQ-DOMAIN 5-RELATED 1 400 - -
Viun9g02163 466 SMART iq_5 141 162 IPR000048 GO:0005515
Viun9g02163 466 SMART iq_5 118 140 IPR000048 GO:0005515
Viun9g02163 466 MobiDBLite consensus disorder prediction 389 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02163 Viun-Chr9 31225587 31229272 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02163 1 437 IQD Protein Family AT3G49260 49.569 8.03e-99 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02163 - - gmx:100808965 650.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02163 9 31225587 31229272 Viun9g02163 9 31225587 31229272 ECH