Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02162 ATGGGGAAGAAAGGAGCCAGCTGGTTTTCCTCCGTCAAAAAAGTTTTCAAATCCTCTTCCAATAAGGACTCGCCGCTGCCGGAGAAGAAGGACACGGTTGATGTTGGGATTTTCCACTTTCAGAAAGACAACAAGAAGGAAGACCAATGGCGGCAGCAGCAGCAGCAGGAGGAGGCGCCAGAGGAGGTGTCCCTGGAGCATTTTCCCGCCGAGAGTTCTCCTGATATTACCTATGAAGGGAGTGCCACGTCAACACCGGTGACTGAAGACAGAACCCATGCTATTGCCTTTGCAGCAGCAACTGCCGCCGCTGCCGAAGCCGCCGTAGCAGCTGCTCAAGCGGCCGCTAGAGTTGTGAGATTGGCCGGTTATGGACGCCAATCCACGGAAGAAAGAGCTGCGATACTCATTCAATCATACTACAGAGGTTACCTAGCTCGACGTGCTTTGCGGGCTTTGAAGGGATTGGTGAGGCTGCAGGCGCTTGTGAGGGGACACAATGTGAGAAAGCAAGCGCAGATGACAATGCGATGCATGCATGCGTTAGTCCGAGTACAGGCAAGAGTAAGAGCTCGAAGACTCCAGTTGACTCAAGAGAAGTTTCAGAGAAGAGTTGAGGAACAGGTGCAAAGAGGACTAGAGGAACAACAACAACCTAATTCTCTTTTGAGCCCCATCAAAATGTTAGACATGGATACATGGGACAACAGGCGCCAAAGTAGCCAACAGATTAAGGAGGATAATTTGAGGAAACATGAAGCTGCAATGAAGAGGGAGAGGGCTCTGGCTTACGCTTTCAACTGCCAGCAGCAGAAGCAAAATCCAAATGATGATGATATTGGAAGCTATGGCAATGAGCGTGAAAGAGCCCAAATGGATTGGAACTGGTTGGAACGCTGGATGTTATCACAATCACAGAACTCAAGGCACTTTGGGTCACGGGAGAGCCTTTATAGAACTCTTGCTACTGCAACTTCCACCACTGATGAAATGTCTGAAGAGAAAACAGTAGAAATTGACATGGCTGCAACTCTGGATTCAGCTCATGCTAACATGGGTCTCATCCACCGAGAATCTTTTGACACAAGCCCCATATCCAATAGGTACCACCAGCGCCACCACAGTGCAGGTGTACCTAGCTACATGGCCCCAACTCAGTCTGCAAAGGCCAAGGCCCGTAATCAAGGCCTGTTTAAGCATAGGGGCTCACCTGGGCCTCACTGGAACTCGTCCACGACGAGAAGTTCTGCTCTTGGGCTGGGCTGTGACTCATCTAGCTCTGGTGGGCCCACTGCAGCTCATGGGTTCCCAAGAAGTCCAACCCCAAAAATTAATGAAATTCGCCTCCAATCTAGACGGATTTCAAGTAGCAGCCCGGATAATGTTCACATTGAGGATTGGGCCCTTCCCCTTGGAACCGGTGGTTGGACTTGA 1434 0.5042 MGKKGASWFSSVKKVFKSSSNKDSPLPEKKDTVDVGIFHFQKDNKKEDQWRQQQQQEEAPEEVSLEHFPAESSPDITYEGSATSTPVTEDRTHAIAFAAATAAAAEAAVAAAQAAARVVRLAGYGRQSTEERAAILIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMHALVRVQARVRARRLQLTQEKFQRRVEEQVQRGLEEQQQPNSLLSPIKMLDMDTWDNRRQSSQQIKEDNLRKHEAAMKRERALAYAFNCQQQKQNPNDDDIGSYGNERERAQMDWNWLERWMLSQSQNSRHFGSRESLYRTLATATSTTDEMSEEKTVEIDMAATLDSAHANMGLIHRESFDTSPISNRYHQRHHSAGVPSYMAPTQSAKAKARNQGLFKHRGSPGPHWNSSTTRSSALGLGCDSSSSGGPTAAHGFPRSPTPKINEIRLQSRRISSSSPDNVHIEDWALPLGTGGWT 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02162 477 MobiDBLite consensus disorder prediction 17 85 - -
Viun9g02162 477 MobiDBLite consensus disorder prediction 23 65 - -
Viun9g02162 477 ProSiteProfiles IQ motif profile. 154 181 IPR000048 GO:0005515
Viun9g02162 477 Pfam IQ calmodulin-binding motif 157 172 IPR000048 GO:0005515
Viun9g02162 477 Pfam IQ calmodulin-binding motif 131 151 IPR000048 GO:0005515
Viun9g02162 477 SMART iq_5 152 173 IPR000048 GO:0005515
Viun9g02162 477 SMART iq_5 129 151 IPR000048 GO:0005515
Viun9g02162 477 ProSiteProfiles IQ motif profile. 130 158 IPR000048 GO:0005515
Viun9g02162 477 MobiDBLite consensus disorder prediction 399 445 - -
Viun9g02162 477 Pfam Protein of unknown function (DUF4005) 363 404 IPR025064 -
Viun9g02162 477 MobiDBLite consensus disorder prediction 405 432 - -
Viun9g02162 477 PANTHER IQ-DOMAIN 5-RELATED 1 411 - -
Viun9g02162 477 Gene3D - 130 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02162 Viun-Chr9 31225587 31229273 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02162 1 448 IQD Protein Family AT3G49260 49.263 2.30e-97 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02162 - - gmx:100808965 641.728