Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02161 ATGGGGAAGAAAGGAGCCAGCTGGTTTTCCTCCGTCAAAAAAGTTTTCAAATCCTCTTCCAATAAGGACTCGCCGCTGCCGGAGAAGAAGGACACGGTTGATGTTGGGATTTTCCACTTTCAGAAAGACAACAAGAAGGAAGACCAATGGCGGCAGCAGCAGCAGCAGGAGGAGGCGCCAGAGGAGGTGTCCCTGGAGCATTTTCCCGCCGAGAGTTCTCCTGATATTACCTATGAAGGGAGTGCCACGTCAACACCGGTGACTGAAGACAGAACCCATGCTATTGCCTTTGCAGCAGCAACTGCCGCCGCTGCCGAAGCCGCCGTAGCAGCTGCTCAAGCGGCCGCTAGAGTTGTGAGATTGGCCGGTTATGGACGCCAATCCACGGAAGAAAGAGCTGCGATACTCATTCAATCATACTACAGAGGTTACCTAGCTCGACGTGCTTTGCGGGCTTTGAAGGGATTGGTGAGGCTGCAGGCGCTTGTGAGGGGACACAATGTGAGAAAGCAAGCGCAGATGACAATGCGATGCATGCATGCGTTAGTCCGAGTACAGGCAAGAGTAAGAGCTCGAAGACTCCAGTTGACTCAAGAGAAGTTTCAGAGAAGAGTTGAGGAACAGGTGCAAAGAGGACTAGAGGAACAACAACAACCTAATTCTCTTTTGAGCCCCATCAAAATGTTAGACATGGATACATGGGACAACAGGCGCCAAAGTAGCCAACAGATTAAGGAGGATAATTTGAGGAAACATGAAGCTGCAATGAAGAGGGAGAGGGCTCTGGCTTACGCTTTCAACTGCCAGCAGAAGCAAAATCCAAATGATGATGATATTGGAAGCTATGGCAATGAGCGTGAAAGAGCCCAAATGGATTGGAACTGGTTGGAACGCTGGATGTTATCACAATCACAGAACTCAAGGCACTTTGGGTCACGGGAGAGCCTTTATAGAACTCTTGCTACTGCAACTTCCACCACTGATGAAATGTCTGAAGAGAAAACAGTAGAAATTGACATGGCTGCAACTCTGGATTCAGCTCATGCTAACATGGGTCTCATCCACCGAGAATCTTTTGACACAAGCCCCATATCCAATAGGTACCACCAGCGCCACCACAGTGCAGGTGTACCTAGCTACATGGCCCCAACTCAGTCTGCAAAGGCCAAGGCCCGTAATCAAGGCCTGTTTAAGCATAGGGGCTCACCTGGGCCTCACTGGAACTCGTCCACGACGAGAAGTTCTGCTCTTGGGCTGGGCTGTGACTCATCTAGCTCTGGTGGGCCCACTGCAGCTCATGGGTTCCCAAGAAGTCCAACCCCAAAAATTAATGAAATTCGCCTCCAATCTAGACGGATTTCAAGTAGCAGCCCGGATAATGTTCACATTGAGGATTGGGCCCTTCCCCTTGGAACCGGTGGTTGGACTTGA 1431 0.5038 MGKKGASWFSSVKKVFKSSSNKDSPLPEKKDTVDVGIFHFQKDNKKEDQWRQQQQQEEAPEEVSLEHFPAESSPDITYEGSATSTPVTEDRTHAIAFAAATAAAAEAAVAAAQAAARVVRLAGYGRQSTEERAAILIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMHALVRVQARVRARRLQLTQEKFQRRVEEQVQRGLEEQQQPNSLLSPIKMLDMDTWDNRRQSSQQIKEDNLRKHEAAMKRERALAYAFNCQQKQNPNDDDIGSYGNERERAQMDWNWLERWMLSQSQNSRHFGSRESLYRTLATATSTTDEMSEEKTVEIDMAATLDSAHANMGLIHRESFDTSPISNRYHQRHHSAGVPSYMAPTQSAKAKARNQGLFKHRGSPGPHWNSSTTRSSALGLGCDSSSSGGPTAAHGFPRSPTPKINEIRLQSRRISSSSPDNVHIEDWALPLGTGGWT 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02161 476 MobiDBLite consensus disorder prediction 17 85 - -
Viun9g02161 476 MobiDBLite consensus disorder prediction 23 65 - -
Viun9g02161 476 ProSiteProfiles IQ motif profile. 154 181 IPR000048 GO:0005515
Viun9g02161 476 SMART iq_5 152 173 IPR000048 GO:0005515
Viun9g02161 476 SMART iq_5 129 151 IPR000048 GO:0005515
Viun9g02161 476 Pfam Protein of unknown function (DUF4005) 362 403 IPR025064 -
Viun9g02161 476 ProSiteProfiles IQ motif profile. 130 158 IPR000048 GO:0005515
Viun9g02161 476 MobiDBLite consensus disorder prediction 404 431 - -
Viun9g02161 476 PANTHER IQ-DOMAIN 5-RELATED 1 410 - -
Viun9g02161 476 MobiDBLite consensus disorder prediction 399 444 - -
Viun9g02161 476 Pfam IQ calmodulin-binding motif 131 151 IPR000048 GO:0005515
Viun9g02161 476 Pfam IQ calmodulin-binding motif 157 172 IPR000048 GO:0005515
Viun9g02161 476 Gene3D - 130 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02161 Viun-Chr9 31225587 31229276 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02161 1 447 IQD Protein Family AT3G49260 49.263 1.25e-95 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02161 - - gmx:100808965 639.417