Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02149 ATGAACTTTGTCTCCGAACATGATTTCCCCAATCTTGAAATCATTCCTCAGACTTTCAGCTCATGCTTTTTCTCTGCTCAACTATGCCCTACAGATAAAACGACGGAGGTTTCACTTCCACCATTAGAGGGTTTTTCCGGTCACGATTGGACACAGCAGTTGCCGTATTCAAGTAAGCAACTTTGCTTGAACGAGTTCCCAGATTTGGAAAACCTAGACCTCGATTTTAGCCTCCCACCCCTGGGTGAAGATTTGGAGGAGGTGGAGCAGAAGCCCTTGAACATTGTTGTTGTTCCCGAAGAAAGTCATCATTGCGGTCGCGAGAAGGGTTTTGGGGATGCTTTATTGGCGATTGAAAATGGGTCTGCGATTTGTGTGAAGAAAGAGGAGGTGCAGAATATTCAGCAGATGCTAGTGCCTCGTGCTGGTAGTAACAGTAAGAAGAAGAAGAAGAAGAAGCCATGTGCTCTGGAATTTGAGGAGATAATGAAGCATTTTGATGTTCCCATTAATGAAGCTGCTAAGCAAATGAATGTGGGGTTAACCATGTTGAAGAGAAGGTGCAGGGAGCTTAACATCATGAGGTGGCCCCATAGGAAACTCAAGAGCTTGCAATTACTCATCGAGAATGTTAAGGAATTGGGTTTGGCAGACGAGGTTTCCATGTTGGAGAAGCATAAAAGGTTGTTGGAAAAATTACCAGGTCTGGAATTAAATGCAAAAGCCAAGAAGCTGAGGCAAGCTTGTTTCAAAGCTAATTACAAGAGGAGAAGGTTTATGGGTATGACACTCCAAGCTTGA 801 0.4395 MNFVSEHDFPNLEIIPQTFSSCFFSAQLCPTDKTTEVSLPPLEGFSGHDWTQQLPYSSKQLCLNEFPDLENLDLDFSLPPLGEDLEEVEQKPLNIVVVPEESHHCGREKGFGDALLAIENGSAICVKKEEVQNIQQMLVPRAGSNSKKKKKKKPCALEFEEIMKHFDVPINEAAKQMNVGLTMLKRRCRELNIMRWPHRKLKSLQLLIENVKELGLADEVSMLEKHKRLLEKLPGLELNAKAKKLRQACFKANYKRRRFMGMTLQA 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02149 266 Pfam RWP-RK domain 157 204 IPR003035 -
Viun9g02149 266 ProSiteProfiles RWP-RK domain profile. 140 225 IPR003035 -
Viun9g02149 266 PANTHER PROTEIN RKD4 53 260 IPR044607 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02149 Viun-Chr9 31167319 31169059 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02149 157 261 AtRKD Transcription Factor Family AT5G53040 61.905 5.89e-39 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Viun9g02149 RWP-RK 2.7e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02149 - - pvu:PHAVU_009G051600g 462.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02149 9 31167319 31169059 Viun9g02149 9 31167319 31169059 ECH