Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Viun9g02115 | ATGGAAAGCGAATTGTTAACTCGTGCTTCACTTGCCCCAACATCGGAGTTACTTTCTCGGACCATACTTGCTCTATTTGACACTGTGAAAGCAGCCAATGAGGTTGTCATTCACAAGGAAAATTTTAAGAGATTCGCTATTCATTTGGAGAATGTTTCATTTATATTAAAGTCTTTGTCAAAGGAAGACATACACAATGCCTGGAGCTTGCAAAAGGCTATGGCTGGTCTCAACCGAGAGGTTGAAGTTGCTAAGCAGCTTTCTGTTGAGTGCAACAGTAGAAGTAAGGTTTATCTTTTGATTAATTCAAGGAAGATTGTTACCCACTTGAATTGTTGTACCAAGGATATAGGTCGCGCCATAACCCTCCTCCCTTTGGCCTCTTTAGACATTAACTCTGGTTTAAATCAACAGATAAGTGAGTTGTGTCAGAAAATGTTAGATGCTGAGTATCAAACAGCTGCAACAGATGAGGAGATTTTGAAGAAAGTTGAGACGGCAATACAAGAGGGAAATGTTGATCGGTCGTATGCGACTCAGTTGCTAGCTGGCACTGCACGTGCAATTGGGGTCCCCGTGGAGCAAGGTGCTTTGAAGAGGGAATTCGAAGATCTGAAAAATGAAATGGAAAATGCCAAGTCAAGGATGGACATGTCAGAAGCTCTACACATGGAGCAGATTATTGCAGTGCTTGGAAAGGCAGATTTTATAACTTCAGCACAAGAGAAGGAAAGTAAGTATTTTGAGAAGAGAAATTCCTTGGGTGAGAGACCATTGTCAGCTCTGCATTCCTTTTACTGCCCAATCTCTCATGAAATCATGGTGGACCCCGTGGAGACTTCCTCTGGGAAGACATTTGAGAGAAGTGAAATAGAGAAATGGTTTGCTGAAGGGAACAATCTCTGTCCCTTGACCAGGTTGCCTCTGGATACTAAAATCCTGAGGCCAAATAAAACTCTTAAAATGTCTATTCAAGAATGGAAGGACAGGAACACTATGATTACCATTTCTACCATCAAATCCGAACTTGAAACGAATGATGAAGAGGAAGTGGTTCGGTCCTTAGACAAATTACAGGATCTGTGCTCAGAAAGAGAGGTGCACCGGGAATGGTTACAAATTGAGAATTACATTACTGTTCTCATTAGACTTCTTAGTTCTAAAAATCGTGAAATAAGAAAGCGTGTTCTACTCATCCTGTCTATGCTTGTAATGGATAATGCGGAGAACAAGGAAGATATTGCTATAGTGGATAATGGACTAGGATTGATTGTTCGTTCACTTTCACGGCAAGTTGAGGAGCGCAAGTTGGCATTGAAGTTGCTGTTGGAGCTATCTAAAAGTAAAAGGGTGTGCAGTCTGATAGGAAACATTCAAGGAAGCATACTTCTGCTGGTAACAATGTTAAACAGTGATGATGTCGAAGCAGCCAAAAATGCACATGAGCTGCTGGAGAACCTCTCTTTCCTTGATCAGAATGTTATAGAGATGGCAAAGGCAAATTATCTTAAGCCTTTACTGCTGAAACTTTCTACAGGACCAGGAAATGTGAAAAACGTTATGGCTGAAACTTTGTCAGAAATTACATTGATCGACCAGAATAAATTGTCTTTGGTCAAAGATGGGGCATTGCAACCTCTTCTTCAGTTGCTCTTAAATGATGACTTGGAAATCAAGAAGGTGTCTGTCAAAGCTTTACTACAGCTCTCAAGCATGCCAGAGAATTGCCTGCAGATGATTAAGGAAGGTGTTGCTCAACCACTGTTGGAATTGCTTTACTGTCACAGTTTACAGTCACCTACACTGCTTGAACAGGTTGTTGCCACAATAATGCATCTTGCCATGTCAACAACTAACCAACAAGCTGAAGTAGAACAGGTTTCATTCTTAGATTCCGAGGAAGACGTGTACAAATTCTTCTCTCTAATTTCTTTGACAGACCCTGAGATACAAAACAAGATTCTCAAAGCTTTTCAGGCGTTGTGTCAATCTTTCTATGGCTTCCGCATCAGAAATAGGTTGAGACAGATATCGGCCGCTAAATTATTGGTTAACTTATTGGAGACTAATACTCAAAGAGTGCGGGTCAATGCCTTGAAGCTGTTGTATTGCTTGACAGAAGACGATGATTATGGCAACATCTCACCACATATAACTGAAAGATTCATTGAAGTCTTGCTTGCCATCATTGAGGCTTCTGATGACGCAGAAGAGATGATTACTGCAATGGGTATCATCTCTAAACTACCGCAGGAGTCTCAAATGACCCAGTGGCTTCTAGATTCTGGGGCACTTAAGACTATTTTGACTTGTCTTACCGATCAACATAGCCATGCCACAGACAAAATCATAGAGAATTCTGTTCAAGCTCTTTGTCGTTTCACTGTCTCATCGAATCTGGAGTGGCAGAAGAGTGTGGCTTTAGAAGGCATAATCCCAGTACTGGTGCAACTGCTGCTTTCTGGAACACCCTTTACAAAACGAAATGCAGCCATTTCCATCAAACAGTTTTCAGAAAGTTCCTATCGCTTGAGCGAGCCGATAAAGAAGCCAGGTATTTTCAAATGCTGCTTTGTAGCTCGAGAAACTGGTTGTCCAGCACACTTAGGCACCTGCTCAATCGAGTCTTCGTTCTGCATCTTGCAAGCTAATGCCTTGGAGCCCCTTGTGCGCTTGCTTAGTGAGACGGATGTTAGAATCTGCGAAGCTTCCTTAGATGCGATACTAACTTTGGTTGATAGTGAAGCACCGCAAAGTGGAAGTAAGGTACTTGCAAATTCAAATGCCATTGCACCAATGATACATTTGTTGAATGTTCAAGCTCCCAGGTTGCAGGAAAAAATTCTAATAGCTTTAGAACGAATTTTCCAACTAGATGAAGTGAGAAATAAGTTCAAAGCTGTGGCTACAATGGCCTTCGTAGGCATAACTCAAGGGAAAGATAGCCGTTTGAAAAGTCTTGCTGGAAGAGGCCTTGCTCAATTGGGTATACTTGATAAACAGTCTTCTTATTTTTAG | 3018 | 0.4148 | MESELLTRASLAPTSELLSRTILALFDTVKAANEVVIHKENFKRFAIHLENVSFILKSLSKEDIHNAWSLQKAMAGLNREVEVAKQLSVECNSRSKVYLLINSRKIVTHLNCCTKDIGRAITLLPLASLDINSGLNQQISELCQKMLDAEYQTAATDEEILKKVETAIQEGNVDRSYATQLLAGTARAIGVPVEQGALKREFEDLKNEMENAKSRMDMSEALHMEQIIAVLGKADFITSAQEKESKYFEKRNSLGERPLSALHSFYCPISHEIMVDPVETSSGKTFERSEIEKWFAEGNNLCPLTRLPLDTKILRPNKTLKMSIQEWKDRNTMITISTIKSELETNDEEEVVRSLDKLQDLCSEREVHREWLQIENYITVLIRLLSSKNREIRKRVLLILSMLVMDNAENKEDIAIVDNGLGLIVRSLSRQVEERKLALKLLLELSKSKRVCSLIGNIQGSILLLVTMLNSDDVEAAKNAHELLENLSFLDQNVIEMAKANYLKPLLLKLSTGPGNVKNVMAETLSEITLIDQNKLSLVKDGALQPLLQLLLNDDLEIKKVSVKALLQLSSMPENCLQMIKEGVAQPLLELLYCHSLQSPTLLEQVVATIMHLAMSTTNQQAEVEQVSFLDSEEDVYKFFSLISLTDPEIQNKILKAFQALCQSFYGFRIRNRLRQISAAKLLVNLLETNTQRVRVNALKLLYCLTEDDDYGNISPHITERFIEVLLAIIEASDDAEEMITAMGIISKLPQESQMTQWLLDSGALKTILTCLTDQHSHATDKIIENSVQALCRFTVSSNLEWQKSVALEGIIPVLVQLLLSGTPFTKRNAAISIKQFSESSYRLSEPIKKPGIFKCCFVARETGCPAHLGTCSIESSFCILQANALEPLVRLLSETDVRICEASLDAILTLVDSEAPQSGSKVLANSNAIAPMIHLLNVQAPRLQEKILIALERIFQLDEVRNKFKAVATMAFVGITQGKDSRLKSLAGRGLAQLGILDKQSSYF | 1005 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Viun9g02115 | 1005 | SUPERFAMILY | ARM repeat | 873 | 996 | IPR016024 | - | |
| Viun9g02115 | 1005 | SUPERFAMILY | RING/U-box | 250 | 333 | - | - | |
| Viun9g02115 | 1005 | ProSiteProfiles | U-box domain profile. | 260 | 334 | IPR003613 | GO:0004842|GO:0016567 | |
| Viun9g02115 | 1005 | Pfam | U-box domain | 265 | 331 | IPR003613 | GO:0004842|GO:0016567 | |
| Viun9g02115 | 1005 | SUPERFAMILY | ARM repeat | 335 | 625 | IPR016024 | - | |
| Viun9g02115 | 1005 | Pfam | Armadillo/beta-catenin-like repeat | 880 | 908 | IPR000225 | GO:0005515 | |
| Viun9g02115 | 1005 | Pfam | Armadillo/beta-catenin-like repeat | 532 | 570 | IPR000225 | GO:0005515 | |
| Viun9g02115 | 1005 | Pfam | MCAfunc domain | 29 | 154 | IPR045766 | - | |
| Viun9g02115 | 1005 | PANTHER | RING-TYPE E3 UBIQUITIN TRANSFERASE | 15 | 1005 | - | - | |
| Viun9g02115 | 1005 | Coils | Coil | 195 | 222 | - | - |
Showing 1 to 10 of 25 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Viun9g02115 | - | - | gmx:100818273 | 1591.25 |
Showing 1 to 1 of 1 entries