Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02062 ATGGGTGGGTTTGGTGGTGTTCCCCACACGAGAAAAAGAAGCAGCAGCGAGAACAGTGGTGGTAGCGTTGTTGGGTTGGATGTGAGAGTGCAGAGCCCTGAAGCATTATTCCATAATAAGATGACGATGATGGCGCATCATAATCATCACCACCGTCCATTGTCATCACCCTTTGATAATGATTCCTGTGCTGGTGATGGCGATGGTCCCACGGCTTACATGTCTTTTACTAATCATATAAACCTTGTTAGTGGAGCTTCTGTTCTCGCTCCTGCTATTGATGGTGGCTGTGGTGCTCCTGCACCTGTAAGGACTTTGCAGCCTTTTGACATTTCTCCTTATACTTCTCCCACCACCACCTCTTCTACCTTCAAACCCTCAGCAGGTGGGATGGCGGCTTCGTTGGGGTTTCCTTTCACAAGTGCACAATGGAGGGAGCTTGAAAGACAAGCCATGATATACAAGTACATGATGGCTTCTGTTCCTGTTCCACCTGATCTTCTCATCCCTACTTCACTCACACCCTCTTCACGCTCTGCCTGCATGGATGGTGGTTTCAATCTGAGGTTGGCCAGTGGCACCGACCCGGAGCCAGGTAGGTGTAGAAGAACAGATGGTAAAAAATGGAGATGTTCAAGAGATGTGGCTCCCAACCACAAGTACTGCGAGCGCCATATGCACAGAGGGCGTCCCCGTTCAAGAAAGCCTGTGGAAGTTAACACCAAGACCGCCACTCCCACTTGCATCAATAACAATACCCACCAAATCAAGAGGCCTCGCCATGAGTGTAATCCTTTTCCTCCTATACCTGATGTAACCGTCGCCATTTCTAACCCCACATCTAGAAAACATGGACCTTCACCCCACTTTCTTGGCTCTTCCACCACTCTGCCATACCTTGAATCTCCCCTCTCTCTTGCTAACTTTGGTTACAAAGCTGCACATTTCGACTCCATGCCTTCTGTTTCTGCAAATAAGGAGCCCAGGGGTTTGGAGTGGATGCTGAATGGAGATCCTATTTCCCTAGGTGCTTCTGACTCAGAATGGCAGTCTCTGATGCATCACAAAGTTGGACTGAGCAGTGAGGGTTCTTGTAACAATCCCCATCCTCACTACCTGAATTCATTTACACTATACAACACTGGGATGGATCAACAGAACAGACGCCACCCTTTGTTCCTGAATCCTCTGGTTGTTCCTGTGGAAAATCTCCAACCAGAGAAGCCAAGAGGTTTCATCGATGCTTGGTCCAACACAGAAACCGGTGAAAACAATGCCCCCACCAACAACAAAAACTCTGCTGCATCAATCGGTAAATTGTCCCTTTCTTCTCTTGATCTATCAATGGGGGGTGGTGCTGTGAATGAAGATGTAGGTAATGTTAACATAGGGCTGGGCCTAATGGAGTCTATTGCAAACACACACACCGATACCAAAATCTCTCTCTCGAACTGGCTCAACCCTGCACCATGGGTGGCCTCAACACTTGGGGGTCCTCTGGCTGAAGTTCTTAGGTCAAGCACGGTGACTGCGACAACAACCAACGAAGCAACCTCAAACACACCATCACCAGCCACCACACATGTTGAATCTAACAGTCCTCTGGGAACAATGGTGTCGTCTCCATCTGGGGTGTTGCAGAAAACGCTTGTTTCGTTGTCTGATAGCAGTAGCAATAGCAGCCCAAGGGTTGCATCATCAAGGGCGAATTCTGAGATGGCCCTGCTGAGGTTTCAACCAAATGTAAATTAA 1752 0.4846 MGGFGGVPHTRKRSSSENSGGSVVGLDVRVQSPEALFHNKMTMMAHHNHHHRPLSSPFDNDSCAGDGDGPTAYMSFTNHINLVSGASVLAPAIDGGCGAPAPVRTLQPFDISPYTSPTTTSSTFKPSAGGMAASLGFPFTSAQWRELERQAMIYKYMMASVPVPPDLLIPTSLTPSSRSACMDGGFNLRLASGTDPEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKPVEVNTKTATPTCINNNTHQIKRPRHECNPFPPIPDVTVAISNPTSRKHGPSPHFLGSSTTLPYLESPLSLANFGYKAAHFDSMPSVSANKEPRGLEWMLNGDPISLGASDSEWQSLMHHKVGLSSEGSCNNPHPHYLNSFTLYNTGMDQQNRRHPLFLNPLVVPVENLQPEKPRGFIDAWSNTETGENNAPTNNKNSAASIGKLSLSSLDLSMGGGAVNEDVGNVNIGLGLMESIANTHTDTKISLSNWLNPAPWVASTLGGPLAEVLRSSTVTATTTNEATSNTPSPATTHVESNSPLGTMVSSPSGVLQKTLVSLSDSSSNSSPRVASSRANSEMALLRFQPNVN 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02062 583 PANTHER GROWTH-REGULATING FACTOR 5 119 447 IPR031137 GO:0005634|GO:0006351|GO:0032502
Viun9g02062 583 ProSiteProfiles QLQ domain profile. 138 173 IPR014978 GO:0005524|GO:0005634|GO:0006355
Viun9g02062 583 SMART QLQ_2 137 173 IPR014978 GO:0005524|GO:0005634|GO:0006355
Viun9g02062 583 ProSiteProfiles WRC domain profile. 195 239 IPR014977 -
Viun9g02062 583 Pfam QLQ 138 170 IPR014978 GO:0005524|GO:0005634|GO:0006355
Viun9g02062 583 MobiDBLite consensus disorder prediction 1 25 - -
Viun9g02062 583 Pfam WRC 196 238 IPR014977 -
Viun9g02062 583 MobiDBLite consensus disorder prediction 512 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02062 Viun-Chr9 30513920 30517054 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02062 405 559 GRF Transcription Factor Family AT5G53660 33.929 3.26e-13 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Viun9g02062 WRC 6.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02062 - - gmx:100803096 872.078
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02062 9 30513920 30517054 Viun9g02062 9 30513920 30517054 ECH