Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02061 ATGGGTGGGTTTGGTGGTGTTCCCCACACGAGAAAAAGAAGCAGCAGCGAGAACAGTGGTGGTAGCGTTGTTGGGTTGGATGTGAGAGTGCAGAGCCCTGAAGCATTATTCCATAATAAGATGACGATGATGGCGCATCATAATCATCACCACCGTCCATTGTCATCACCCTTTGATAATGATTCCTGTGCTGGTGATGGCGATGGTCCCACGGCTTACATGTCTTTTACTAATCATATAAACCTTGTTAGTGGAGCTTCTGTTCTCGCTCCTGCTATTGATGGTGGCTGTGGTGCTCCTGCACCTGTAAGGACTTTGCAGCCTTTTGACATTTCTCCTTATACTTCTCCCACCACCACCTCTTCTACCTTCAAACCCTCAGGTGGGATGGCGGCTTCGTTGGGGTTTCCTTTCACAAGTGCACAATGGAGGGAGCTTGAAAGACAAGCCATGATATACAAGTACATGATGGCTTCTGTTCCTGTTCCACCTGATCTTCTCATCCCTACTTCACTCACACCCTCTTCACGCTCTGCCTGCATGGATGGTGGTTTCAATCTGAGGTTGGCCAGTGGCACCGACCCGGAGCCAGGTAGGTGTAGAAGAACAGATGGTAAAAAATGGAGATGTTCAAGAGATGTGGCTCCCAACCACAAGTACTGCGAGCGCCATATGCACAGAGGGCGTCCCCGTTCAAGAAAGCCTGTGGAAGTTAACACCAAGACCGCCACTCCCACTTGCATCAATAACAATACCCACCAAATCAAGAGGCCTCGCCATGAGTGTAATCCTTTTCCTCCTATACCTGATGTAACCGTCGCCATTTCTAACCCCACATCTAGAAAACATGGACCTTCACCCCACTTTCTTGGCTCTTCCACCACTCTGCCATACCTTGAATCTCCCCTCTCTCTTGCTAACTTTGGTTACAAAGCTGCACATTTCGACTCCATGCCTTCTGTTTCTGCAAATAAGGAGCCCAGGGGTTTGGAGTGGATGCTGAATGGAGATCCTATTTCCCTAGGTGCTTCTGACTCAGAATGGCAGTCTCTGATGCATCACAAAGTTGGACTGAGCAGTGAGGGTTCTTGTAACAATCCCCATCCTCACTACCTGAATTCATTTACACTATACAACACTGGGATGGATCAACAGAACAGACGCCACCCTTTGTTCCTGAATCCTCTGGTTGTTCCTGTGGAAAATCTCCAACCAGAGAAGCCAAGAGGTTTCATCGATGCTTGGTCCAACACAGAAACCGGTGAAAACAATGCCCCCACCAACAACAAAAACTCTGCTGCATCAATCGGTAAATTGTCCCTTTCTTCTCTTGATCTATCAATGGGGGGTGGTGCTGTGAATGAAGATGTAGGTAATGTTAACATAGGGCTGGGCCTAATGGAGTCTATTGCAAACACACACACCGATACCAAAATCTCTCTCTCGAACTGGCTCAACCCTGCACCATGGGTGGCCTCAACACTTGGGGGTCCTCTGGCTGAAGTTCTTAGGTCAAGCACGGTGACTGCGACAACAACCAACGAAGCAACCTCAAACACACCATCACCAGCCACCACACATGTTGAATCTAACAGTCCTCTGGGAACAATGGTGTCGTCTCCATCTGGGGTGTTGCAGAAAACGCTTGTTTCGTTGTCTGATAGCAGTAGCAATAGCAGCCCAAGGGTTGCATCATCAAGGGCGAATTCTGAGATGGCCCTGCTGAGGTTTCAACCAAATGTAAATTAA 1749 0.4843 MGGFGGVPHTRKRSSSENSGGSVVGLDVRVQSPEALFHNKMTMMAHHNHHHRPLSSPFDNDSCAGDGDGPTAYMSFTNHINLVSGASVLAPAIDGGCGAPAPVRTLQPFDISPYTSPTTTSSTFKPSGGMAASLGFPFTSAQWRELERQAMIYKYMMASVPVPPDLLIPTSLTPSSRSACMDGGFNLRLASGTDPEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKPVEVNTKTATPTCINNNTHQIKRPRHECNPFPPIPDVTVAISNPTSRKHGPSPHFLGSSTTLPYLESPLSLANFGYKAAHFDSMPSVSANKEPRGLEWMLNGDPISLGASDSEWQSLMHHKVGLSSEGSCNNPHPHYLNSFTLYNTGMDQQNRRHPLFLNPLVVPVENLQPEKPRGFIDAWSNTETGENNAPTNNKNSAASIGKLSLSSLDLSMGGGAVNEDVGNVNIGLGLMESIANTHTDTKISLSNWLNPAPWVASTLGGPLAEVLRSSTVTATTTNEATSNTPSPATTHVESNSPLGTMVSSPSGVLQKTLVSLSDSSSNSSPRVASSRANSEMALLRFQPNVN 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02061 582 ProSiteProfiles QLQ domain profile. 137 172 IPR014978 GO:0005524|GO:0005634|GO:0006355
Viun9g02061 582 Pfam WRC 195 237 IPR014977 -
Viun9g02061 582 Pfam QLQ 137 169 IPR014978 GO:0005524|GO:0005634|GO:0006355
Viun9g02061 582 ProSiteProfiles WRC domain profile. 194 238 IPR014977 -
Viun9g02061 582 MobiDBLite consensus disorder prediction 511 540 - -
Viun9g02061 582 SMART QLQ_2 136 172 IPR014978 GO:0005524|GO:0005634|GO:0006355
Viun9g02061 582 PANTHER GROWTH-REGULATING FACTOR 5 121 446 IPR031137 GO:0005634|GO:0006351|GO:0032502
Viun9g02061 582 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02061 Viun-Chr9 30513920 30517056 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02061 404 558 GRF Transcription Factor Family AT5G53660 33.929 3.19e-13 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Viun9g02061 WRC 6.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02061 - - gmx:100803096 867.455