Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02060 ATGATGATCTACGTTCCACTTCTCTTCTTCTCTTGTTTCCTATTTCATCATTTTCATGCCATCCTATGTGACAGTAACACAGACAGAGAAGCCCTTCTTTCTTTCAAATCTCAAGTCACAGACCCTAAAAATGCTCTCTCTGCCTGGTCCACAAACTCTAATCACTGCAACTGGTACGGTGTCAGATGCTCCAAAGTTGGAAACAGGGTCCAATCTCTGAATCTACCAGGACTTTCCCTCTCTGGCAAACTGCCCCCTCACCTTTCCAACCTCACTTACCTACATTCACTTGACCTTTCCAACAACAATTTTCATGGCCAAATTCCCACACACTTTGCCCATCTCTCACTTCTCAATGTCATTCAATTATCTTCCAACAATCTCAGTGGTACAATTCCATCACAACTGGGTTATCTCCACCGTCTACAAATTTTAGATTTTTCTGTCAATAATCTCACAGGTCAGATTCCTCCATCATTTGCCAATCTCTCTTCTCTTAAGAATCTTTCATTGGCAAGGAACCGTTTGGAGGGGGACATTCCAACTGAACTTGGTAATCTCCGCAATCTTTCCTTTCTTCAAATCTCAGAGAACAATTTCTCTGCCAACTTTCCCACTTCTATCTTCAACATCTCTTCCTTAGTCTTTTTATCCGTCACAAAGAACAATCTTACGGGTGAGTTACCACAAAATTTTGGCCTTTTTCTTCCAAATTTAAAGTATCTACACCTGGCAACTAATATGTTTGAAGGGGTAATTCCGAATTCCATATCCAATGCCTCACAACTTCAAGAGATTGACCTTGCCAACAATAAATTTACTGGACCCATACCTCTATTCTACAACTTAAAAAACCTTACCCGCCTCGTTCTTGGTCATAATTATCTCTCTTCCACAACCTTGTTAAATGTTCAGTTCTTTGATAGCCTTAGAAACTCCACCAAGTTGCAGGAACTCCGGATCCATGAAAACCATTTGGCTGGGGAGCTCCCAAGCTCTGTTGCTAATCTTTCCCGGAATCTCGAACATTTCTGTGTTGCTAATAATTTTCTTACTGGTACCATTCCTCAAGGAATGAAGAAATTCAAAAATCTCATATCCTTGTCCTTTGAAATCAATTCTTTCACTGGAGAGTTACCATCAGAAATAGGAGCACTCAATAATCTACAGCAACTTCTTATATACAGCAACAGATTGTCTGGGGACATTCCAGACATTTTTGGCAATCTCACAAATCTCTTTATCCTTGCAATGGGAAATAACCAATTCTCGGGTACAATTCACCAAAGTATTGGACAATGCAAGAGATTAACTTTTCTTGACTTGCGACTGAATAGACTTGGTGGGACCGTACCAAACGAGATTTTTCAGCTTTCTAGCTTAAGAATGTTGAATTTAGCAGGAAACTCTCTGCAGGGTCCGTTACCTCCTATGGTGGGAACCATGAAACAGCTTGAGACCATGCATATTTCTGACAACCAGTTGTCAGGGAACATTCCTGAGCAAATAGAGAACTGTTTGAGCTTGAAGTGGGTAACGATGGCAAGAAACAGATTCAATGGTTCGATCCCAACAAAAATTGGGAATTTAGCATCCCTTGAGACTTTGGATTTATCATTAAACAGTCTCACTGGTCCTATTCCTCAAAGTTTAGAAAAGCTCGAGTATATGCAGAAATTAAATTTGTCTTTCAACCATTTGGAAGGGGAGGTTCCTACGAAAGGTCTTTTTACGAACCTTACCAAGTTTGATCTTCGAGGTAACAACCAACTCTGTAGCCTTAGCAAGGAAATTGTACAAAATTTGGGAGTACTCCCGTGTGTTGTTGGCAAGAAGAAAAGAAAATTCTTACTCCCTACCATGCTTGCAGTAGTTGGTGCTACTGCTTTGTTCATTTCAGTGCTCTTTCTGTTTTGGACAATGAAGAAGAAAAGAAAGGAGAGGAAAACCCTTGTGTCATCTGACCCTTTCATGGGGTTGTCTAAAAATATAACTTACGGTGATATTCGGATAGCTACAAACAATTTTGCAGCTGAAAACTTAATTGGAAAAGGAGGTTTTGGCTCTGTGTACAAGGGTGTTTTCAGCTTCAGCACTGGTGAAACCGTGACCCTTGCTGTCAAAGTCCTGGACCTGCAACAAAGCAAAGCGTCTAAGAGTTTCAACGCGGAATGTGAAGCTTTGAAAAATGTTAGGCATCGGAACCTGGTGAAGGTCATCACCTCTTGCTCCAGCCTTGATTATAAAGGCGAGGAATTTAAGGCCATTGTCATGCAATTCATGCCCAATGGAAACTTGGACTTCAAAATACACCCAGGAGACGAAGAGTCAGGCTCCCTTCTAACCTTGATGCAAAGATTGAACATTGCAATCGATGTTGCTTCTGCTCTGGAGTACTTGCACCATGACTGCGATCCACCAATAGCACATTGTGATCTGAAACCTGCCAATGTCCTTCTAGATGAAAATATGACTGCACATGTTGTAGATTTTGGATTGGCAAGGTTTTTGTGTCAAAACACATCAGAGAAGCAGAGTAGCACTCTAGGACTGAAAGGATCAATTGGCTACATAGCCCCAGAATATGGTTTTGGAAGCAAGGCTTCAACTGAGGGCGATGTTTACAGTTTTGGGATCCTACTGCTAGAGATGTTCACAGCCAAAAGACCAAGCGATAAAATGTTCAAAGAAGGGTTAAGCCTCAACAAATTTGTCTCAAGCATGGATGAGAATGAAGTAGTGAAGGTTGCAGATCGAAGGCTCATTGAGGATTATGAATGTTCAACACAAAGCTCAAACAGTGATGATGGTAGCAGTGGCTTTGACAGCAACACACATTGGATGCATAAAGCTGAAGACTGCATCGCTGATGTGTTGAGAGTTGGTCTGAGTTGCGCAGCTGATCAACCCAAAGAACGATGGAATATGAGAGAGGCCTTATCAAAATTGCATGCTATTAACCACTCTATGCTGCCTTTCTGA 2982 0.4131 MMIYVPLLFFSCFLFHHFHAILCDSNTDREALLSFKSQVTDPKNALSAWSTNSNHCNWYGVRCSKVGNRVQSLNLPGLSLSGKLPPHLSNLTYLHSLDLSNNNFHGQIPTHFAHLSLLNVIQLSSNNLSGTIPSQLGYLHRLQILDFSVNNLTGQIPPSFANLSSLKNLSLARNRLEGDIPTELGNLRNLSFLQISENNFSANFPTSIFNISSLVFLSVTKNNLTGELPQNFGLFLPNLKYLHLATNMFEGVIPNSISNASQLQEIDLANNKFTGPIPLFYNLKNLTRLVLGHNYLSSTTLLNVQFFDSLRNSTKLQELRIHENHLAGELPSSVANLSRNLEHFCVANNFLTGTIPQGMKKFKNLISLSFEINSFTGELPSEIGALNNLQQLLIYSNRLSGDIPDIFGNLTNLFILAMGNNQFSGTIHQSIGQCKRLTFLDLRLNRLGGTVPNEIFQLSSLRMLNLAGNSLQGPLPPMVGTMKQLETMHISDNQLSGNIPEQIENCLSLKWVTMARNRFNGSIPTKIGNLASLETLDLSLNSLTGPIPQSLEKLEYMQKLNLSFNHLEGEVPTKGLFTNLTKFDLRGNNQLCSLSKEIVQNLGVLPCVVGKKKRKFLLPTMLAVVGATALFISVLFLFWTMKKKRKERKTLVSSDPFMGLSKNITYGDIRIATNNFAAENLIGKGGFGSVYKGVFSFSTGETVTLAVKVLDLQQSKASKSFNAECEALKNVRHRNLVKVITSCSSLDYKGEEFKAIVMQFMPNGNLDFKIHPGDEESGSLLTLMQRLNIAIDVASALEYLHHDCDPPIAHCDLKPANVLLDENMTAHVVDFGLARFLCQNTSEKQSSTLGLKGSIGYIAPEYGFGSKASTEGDVYSFGILLLEMFTAKRPSDKMFKEGLSLNKFVSSMDENEVVKVADRRLIEDYECSTQSSNSDDGSSGFDSNTHWMHKAEDCIADVLRVGLSCAADQPKERWNMREALSKLHAINHSMLPF 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02060 993 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 761 992 - -
Viun9g02060 993 Gene3D Ribonuclease Inhibitor 180 279 IPR032675 -
Viun9g02060 993 Gene3D Ribonuclease Inhibitor 24 179 IPR032675 -
Viun9g02060 993 ProSitePatterns Protein kinases ATP-binding region signature. 682 708 IPR017441 GO:0005524
Viun9g02060 993 SMART serkin_6 676 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02060 993 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Viun9g02060 993 SUPERFAMILY L domain-like 339 595 - -
Viun9g02060 993 SMART LRR_typ_2 410 434 IPR003591 -
Viun9g02060 993 SMART LRR_typ_2 386 409 IPR003591 -
Viun9g02060 993 SMART LRR_typ_2 139 162 IPR003591 -
Viun9g02060 993 SMART LRR_typ_2 91 114 IPR003591 -
Viun9g02060 993 SMART LRR_typ_2 163 187 IPR003591 -
Viun9g02060 993 SMART LRR_typ_2 458 482 IPR003591 -
Viun9g02060 993 SMART LRR_typ_2 236 259 IPR003591 -
Viun9g02060 993 SMART LRR_typ_2 530 554 IPR003591 -
Viun9g02060 993 SMART LRR_typ_2 283 309 IPR003591 -
Viun9g02060 993 FunFam Leucine-rich repeat receptor protein kinase EMS1 204 302 - -
Viun9g02060 993 Pfam Protein tyrosine and serine/threonine kinase 679 908 IPR001245 GO:0004672|GO:0006468
Viun9g02060 993 PANTHER LEUCINE RICH REPEAT KINASE 2 308 986 - -
Viun9g02060 993 SUPERFAMILY RNI-like 72 400 - -
Viun9g02060 993 FunFam LRR receptor-like serine/threonine-protein kinase EFR 303 613 - -
Viun9g02060 993 ProSiteProfiles Protein kinase domain profile. 676 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02060 993 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 25 183 - -
Viun9g02060 993 ProSitePatterns Serine/Threonine protein kinases active-site signature. 808 820 IPR008271 GO:0004672|GO:0006468
Viun9g02060 993 Gene3D Transferase(Phosphotransferase) domain 1 761 991 - -
Viun9g02060 993 Gene3D Ribonuclease Inhibitor 280 601 IPR032675 -
Viun9g02060 993 Gene3D Phosphorylase Kinase; domain 1 659 760 - -
Viun9g02060 993 FunFam LRR receptor-like serine/threonine-protein kinase EFR 647 760 - -
Viun9g02060 993 SUPERFAMILY Protein kinase-like (PK-like) 651 984 IPR011009 -
Viun9g02060 993 Pfam Leucine rich repeat 93 152 IPR001611 GO:0005515
Viun9g02060 993 Pfam Leucine rich repeat 509 567 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02060 Viun-Chr9 30509398 30512766 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02060 27 986 Receptor kinase-like Gene Family AT3G47570 40.622 0.0 714
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Viun9g02060 PK_Tyr_Ser-Thr 2.9e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02060 - - gmx:100776054 1471.83