Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02057 ATGACCCTATTGAGACTCATTTTGCTCTTATGTTTCCTATTTACTCATTTCCATCACATCCTATGTGACAGTAACACAGACAGAGAAGCCCTTCTTTCTTTCAAATCTCAAGTCACTGACCCTAAAAATGCTCTCTCTGCCTGGTCCACAAACTCCAGTCACTGCATGTGGTACGGTGTCACATGCTCCAAACTTGGAAACAGGGTCCAATCTCTGAATCTACCAGGACTTTCCCTCTCTGGCAAACTGCCCCCTCACCTTTCCAACCTCACTTTCCTACACTCACTTGACCTTTCCAACAACAATTTTCATGGCCAAATTCCCACACACTTTGCCCATCTCTCACTTCTCAATGTCATTCACTTATCATCCAACAATCTCAGTGGTACAATTCCATCACAACTGGGTTATCTCCACCGTCTACAAATTTTAGATTTTTCTGTCAATAATCTCACAGGTCAGATTCCTCCATCTTTTGCCGATCTCTCTTCTCTTAAGAATCTTTCCTTGGCAAGGAACCGTTTGGATGGGGACATTCCAACTGAACTTGGTAATCTCCTCAATCTTTCCATTCTTCAAATCTCAGAGAACAATTTCTCTGGCAAGTTTCCCACTTCTATCTTCAACATCTCTTCCTTAGTCTTCTTATCTGTCACACAAAACAAGCTCACAGGTGAGTTACCACAAAATTTTGGCCTTTTTCTCCCAAATTTAAAGTATCTATACCTGGCAACTAATATGTTTGAAGGGGTAATTCCGAATTCCATATCCAATGCCTCACAACTTCAAGAGATTGACCTTTCCAACAATAAATTTACTGGACCCATACCTCTATTCTACAACTTAAAGAACCTTACCCACCTCATTCTTGGTAATAATTCTCTCTCTTCCACAACCTTGTTAAATCTTCAGTTCTTTGATAGCCTTAGAAACTCCACCAAGTTGCAGGAACTCCTGATCTATGAAAACCACTTGACTGGGGAGCTACCAAAATCTTTTGCTAATCTGTCATCAAATCTCCAACATTTATGTGTTGCTGATAACTATTTTATTGGCAACATTCCTCAAGGAATGAAGAAATTTGAAAATATCATATCCTTGTCCTTTGAAAATAATCTTTTCACTGGAGAGTTACCATCAGAAATAGGAGCACTCAATAATCTACAGCAACTTCTTATATACAGCAACAGATTGTCTGGGGACATTCCAGACATTTTTGGCAATCTCACAAATCTCTTTTCCCTTGCAATGGGAAATAACCAACTCTCGGGTAGAATTCACCAAAGTATTGGACAATGCAAGATATTATCTTTTCTTGACTTGAGCATGAATAGACTTGGTGGGACCGTACCAAATGAGATCTTTCAACTTTCTGGCTTAGGACAATTATATTTAGCAGGAAACTCTCTGCAAGGTCCACTTCCTCCTAAGGTAGGCACCATGAAACAGCTCGAGGTCATGGATATTTCTGGCAACCAGTTGTCAGGGAACATTCCTGAGGAAATAGGGGAGTGTTCAACCTTGAAGTCGCTAACGATGGCAAGAAACAAATTCAATGGTTCAATCCCAACTAAAATTGGGAATTTGGCATCCCTAGAGAATTTGGATTTATCATTAAACAGTCTCTCCGGTCCTATTCCTCAAAGTTTAGAAAAGCTCGAGTATATGCAGAAATTAAATTTGTCTTTCAACCATTTGGAAGGAGAGGTTCCTAAGAAAGGTCTTTTTACGAACCTAACCAAATTTGATGTTCGAGGTAACAATCAACTCTGTAGCCTTAACAAGGAAATTGTCCAGAATTTGAGAGTACACCTTTGTGCTGTTGCCAAAAAGAAAAGAAAGATTTTACTGCCTATCGTACTTGCTGTCGTTGGTGCTATTGCTTTGTTCATTTCAACGCTCTTTGCATTTTGGACAATGATGTCAAGAGAGAAGAAAAGAGAAGAGGGGAAAACTAGTGTGTCATCTGCCCCTCCTAAAGGGCTGCCTCATAATATTTCTTACGGCGATATTCTCACTGCCACAAACAACTTTGCAGCTGAAAACTTGATCGGAAAAGGAGGCTTTGGTTCTGTGTATAAGGGTGTGTTCAGCTTCAGCACTGGCGAAACCGCCACTCTCGCTGTCAAAGTCCTGGACCTGCAGCAGAGCAGAGCTTCCAAGAGTTTCATTGCTGAGTGCGAAGCTTTGAAAAATGTCAGGCACCGGAACCTAGTAAAGGTTATTACTTCTTGCTCCAGCCTTGATTATAAAGGCGAGGAATTTAAGGCCCTTGTGATGCAATTCATGCCCAATGGCAACTTGGACATGAAAATACACCCGGAAGATGAAGAGTCGGGATGTTTTCTAACCTTGATGCAAAGACTGAACATTGCCATTGATGTTGCGTCTGCTATGGAGTACTTGCACCATGGCTGCGACCCACCAATAGTTCATTGTGATCTGAAACCTGCCAATGTCCTTCTGGATGAAAATATGGTGGCACATATTGCAGATTTTGGATTGGCAAGGTTTCTCTCCCAAAATACATCAGAGAAGCAAAGCACTATAGGACTGAAAGGATCCATCGGCTACATTGCCCCAGAATATGGTCAAGGAGGCAAGGCTTCGACCGAGGGCGATGTGTACAGTTTTGGGACTCTACTGTTAGAGATGTTTACGGCCAAAAAACCAACTGATGAAATATTCAAAGAAGGATTGAGCGTAAGCAAATTTTTGTCAGGCATGGATGAGAATGAAATGCTGAAGGTTGTTGATAGAAGGCTTATTGATGGTTATGAATATTGGAAACAAAGCTCGAGCAGTGAGGACTATAGCGATGAACTTAGCAGCAAAAGAGATTGGATGCATAAAGCGGAGGAGTGCATAGCTGATGTGATAAGAGTTGGGTTGTGTTGCACGGCTGATCAACCCAAAGAACGATGCAGCATGAGAGACGCCTCATCAAAATTGCAAACAATTAAGCACTCTATGCTGTCCTTTCAACTTTAG 2991 0.4132 MTLLRLILLLCFLFTHFHHILCDSNTDREALLSFKSQVTDPKNALSAWSTNSSHCMWYGVTCSKLGNRVQSLNLPGLSLSGKLPPHLSNLTFLHSLDLSNNNFHGQIPTHFAHLSLLNVIHLSSNNLSGTIPSQLGYLHRLQILDFSVNNLTGQIPPSFADLSSLKNLSLARNRLDGDIPTELGNLLNLSILQISENNFSGKFPTSIFNISSLVFLSVTQNKLTGELPQNFGLFLPNLKYLYLATNMFEGVIPNSISNASQLQEIDLSNNKFTGPIPLFYNLKNLTHLILGNNSLSSTTLLNLQFFDSLRNSTKLQELLIYENHLTGELPKSFANLSSNLQHLCVADNYFIGNIPQGMKKFENIISLSFENNLFTGELPSEIGALNNLQQLLIYSNRLSGDIPDIFGNLTNLFSLAMGNNQLSGRIHQSIGQCKILSFLDLSMNRLGGTVPNEIFQLSGLGQLYLAGNSLQGPLPPKVGTMKQLEVMDISGNQLSGNIPEEIGECSTLKSLTMARNKFNGSIPTKIGNLASLENLDLSLNSLSGPIPQSLEKLEYMQKLNLSFNHLEGEVPKKGLFTNLTKFDVRGNNQLCSLNKEIVQNLRVHLCAVAKKKRKILLPIVLAVVGAIALFISTLFAFWTMMSREKKREEGKTSVSSAPPKGLPHNISYGDILTATNNFAAENLIGKGGFGSVYKGVFSFSTGETATLAVKVLDLQQSRASKSFIAECEALKNVRHRNLVKVITSCSSLDYKGEEFKALVMQFMPNGNLDMKIHPEDEESGCFLTLMQRLNIAIDVASAMEYLHHGCDPPIVHCDLKPANVLLDENMVAHIADFGLARFLSQNTSEKQSTIGLKGSIGYIAPEYGQGGKASTEGDVYSFGTLLLEMFTAKKPTDEIFKEGLSVSKFLSGMDENEMLKVVDRRLIDGYEYWKQSSSSEDYSDELSSKRDWMHKAEECIADVIRVGLCCTADQPKERCSMRDASSKLQTIKHSMLSFQL 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02057 996 Gene3D Transferase(Phosphotransferase) domain 1 763 993 - -
Viun9g02057 996 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
Viun9g02057 996 SMART serkin_6 678 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02057 996 Gene3D Ribonuclease Inhibitor 178 279 IPR032675 -
Viun9g02057 996 SUPERFAMILY L domain-like 339 594 - -
Viun9g02057 996 Pfam Protein tyrosine and serine/threonine kinase 681 983 IPR001245 GO:0004672|GO:0006468
Viun9g02057 996 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 763 995 - -
Viun9g02057 996 SMART LRR_typ_2 385 408 IPR003591 -
Viun9g02057 996 SMART LRR_typ_2 235 258 IPR003591 -
Viun9g02057 996 SMART LRR_typ_2 529 553 IPR003591 -
Viun9g02057 996 SMART LRR_typ_2 162 186 IPR003591 -
Viun9g02057 996 SMART LRR_typ_2 409 433 IPR003591 -
Viun9g02057 996 SMART LRR_typ_2 114 138 IPR003591 -
Viun9g02057 996 SMART LRR_typ_2 481 505 IPR003591 -
Viun9g02057 996 SMART LRR_typ_2 282 307 IPR003591 -
Viun9g02057 996 SMART LRR_typ_2 90 113 IPR003591 -
Viun9g02057 996 ProSitePatterns Serine/Threonine protein kinases active-site signature. 810 822 IPR008271 GO:0004672|GO:0006468
Viun9g02057 996 Gene3D Ribonuclease Inhibitor 280 601 IPR032675 -
Viun9g02057 996 FunFam LRR receptor-like serine/threonine-protein kinase EFR 302 612 - -
Viun9g02057 996 Gene3D Ribonuclease Inhibitor 23 177 IPR032675 -
Viun9g02057 996 ProSiteProfiles Protein kinase domain profile. 678 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g02057 996 FunFam Leucine-rich repeat receptor protein kinase EMS1 203 301 - -
Viun9g02057 996 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 24 183 - -
Viun9g02057 996 ProSitePatterns Protein kinases ATP-binding region signature. 684 710 IPR017441 GO:0005524
Viun9g02057 996 SUPERFAMILY Protein kinase-like (PK-like) 655 984 IPR011009 -
Viun9g02057 996 SUPERFAMILY RNI-like 71 399 - -
Viun9g02057 996 Pfam Leucine rich repeat 117 175 IPR001611 GO:0005515
Viun9g02057 996 PANTHER OS04G0122200 PROTEIN 184 989 - -
Viun9g02057 996 Gene3D Phosphorylase Kinase; domain 1 661 762 - -
Viun9g02057 996 FunFam LRR receptor-like serine/threonine-protein kinase EFR 650 762 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02057 Viun-Chr9 30457040 30460297 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02057 26 989 Receptor kinase-like Gene Family AT3G47570 40.179 0.0 702
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Viun9g02057 PK_Tyr_Ser-Thr 1.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02057 - - gmx:100776054 1427.54