Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02036 ATGGCTGCTGTTCCTGATGGATTGAAGGCGTGGGAATTACTCAAGGGAAGACCGGGCAATGTTGATCTAATACTGACGGAGGTGGATTTGCCATCCATATCTGGCTATGCACTTCTTACCTTAATTATGGAGCATGATATTTGCAAAAACATCCCTGTCATAATGATGTCTTCCCAAGATTCAATTAGCACGGTATACAAATGCATGCTGAGGGGTGCTGCAGATTATCTTGTTAAGCCAATAAGAAAAAATGAACTGAGAAATTTGTGGCAACATGTTTGGAGAAGACAATCATCAGCCACTGGCATAAATGGTCCCCAAGATGAGAGTGTTGCACAGCAGAAGGTCGAAGCCACTGCTGAAAATAATGCTGCTAGTAATCGTTCAAGTGGTGATGCTGCTTGCATTCAGCGAAATATGGAATTAATTGAGAAAGGAAGTGATGCACAGAGCTCTTGTACTAAGCCTGACTTGGAAGCTGAGAGTGGGCCTGTTGATAACATGCAGGAATTTTCTCCGCTGAAATGTGGGGAAGAATATCCAAGTGGAGCCGAGACACAAGAGGTTGAAACATGCATTCGTTTAGGACAGACGTTGGTGATGAATGGCAGTCATGCTGGAGGATTAACTATGCACAGAAATGGTGAAGCAAGCACAACTAATGACAAGGATGCTGATCCGGAGCATTTGGGGAATGCTAGCATCAGTGGTGAGGCTCATGACAATCACTATGTTCAAATTAACTCTTCTAAGGAAGCTATTGACTTGATTGGAGCGTTTCATACTCATCCCAACTGCACGGTAAAAAGTCCCACAGTTGATAGCACAAGCAAGGTTGACTTTTCTCCTCAATTAGATCTTTCTCTGAGAAGATCTCGTCCCAGCAGCTTTGAGAATGAACTCACTGAAGAAAGGCATACCCTGATGCATTCGAATGCTTCAGCCTTCAAGCGGTATACTAACAGGCAATTGCAAGTATTGACGCCTACAGCGTTAGTTAACTTGTCTGACCATCAAAGAGATCACAGTGCAAATGGTGAGAAAAGCATCTCACACATTGTTAATGGCTGCAACTCCGATAGTTCAGCACCAGGTATGCAAAGATGTATCGTGTCTCCAACTACAGTCCAATCAAAAGAGTCTGAAGTTGCAACCTCACACTCTCAGCAAGGGCATTCTCTCCCAATTCCAGTAAAGGGTGTAAGGTTCAATGATCTATGCACAGCCTATCGTTCTGTACTTCCTTCAATGTTTAGTACACAGTCAGGTCCACAAGCAATGCCAAGTCCAAGTTCAGTTGTGCTCCTTGAACCAAACTTTCAGAATGCATTTTATCAGTCAAACATTAAAGAGAGTAGTTCAGAGCAGCTTTATCAACCTCTTGGTCCAAATGGGAACAGTTCCCAGAACCACATTGTGTACACACAGGAACACAAACCAGAACATGCGGAGGATCGAAGGCATTTCTCTCCTACAACTGATCAAAGTGTGTCAAGTAGTTTCTGTAATGGCAATGCAAGCCATCTTAACAGCATCGGTTATGGAAGCAACTGTGGAAGTAGCAGCAATGCCGATCAAGTTACCGTTGTCAGGGTAGCTTCAGAGAGCAAGAATGAGGACCTCACAAACAATGTAAACAATCATCGATCCATCCAAAGAGAAGCAGCACTAAACAAATTCCGGTTGAAAAGAAAAGAGAGATGCTATGAGAAGAAGGTTCGATATGAGAGCAGAAAGAAACTAGCAGAGCAGCGTCCAAGAGTGAAAGGACAGTTTGTTCGTCAAGTTCATCCTGATTCTCTTGTTGCAGAACAAGATGGTAAAGAATATGATCATTCACAGATTTCTGACTCACTGGAGAGGAGAGCATGA 1872 0.4327 MAAVPDGLKAWELLKGRPGNVDLILTEVDLPSISGYALLTLIMEHDICKNIPVIMMSSQDSISTVYKCMLRGAADYLVKPIRKNELRNLWQHVWRRQSSATGINGPQDESVAQQKVEATAENNAASNRSSGDAACIQRNMELIEKGSDAQSSCTKPDLEAESGPVDNMQEFSPLKCGEEYPSGAETQEVETCIRLGQTLVMNGSHAGGLTMHRNGEASTTNDKDADPEHLGNASISGEAHDNHYVQINSSKEAIDLIGAFHTHPNCTVKSPTVDSTSKVDFSPQLDLSLRRSRPSSFENELTEERHTLMHSNASAFKRYTNRQLQVLTPTALVNLSDHQRDHSANGEKSISHIVNGCNSDSSAPGMQRCIVSPTTVQSKESEVATSHSQQGHSLPIPVKGVRFNDLCTAYRSVLPSMFSTQSGPQAMPSPSSVVLLEPNFQNAFYQSNIKESSSEQLYQPLGPNGNSSQNHIVYTQEHKPEHAEDRRHFSPTTDQSVSSSFCNGNASHLNSIGYGSNCGSSSNADQVTVVRVASESKNEDLTNNVNNHRSIQREAALNKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQVHPDSLVAEQDGKEYDHSQISDSLERRA 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02036 623 Gene3D - 2 179 - -
Viun9g02036 623 ProSiteProfiles CCT domain profile. 553 595 IPR010402 GO:0005515
Viun9g02036 623 MobiDBLite consensus disorder prediction 576 592 - -
Viun9g02036 623 MobiDBLite consensus disorder prediction 601 623 - -
Viun9g02036 623 MobiDBLite consensus disorder prediction 147 167 - -
Viun9g02036 623 Pfam Response regulator receiver domain 2 88 IPR001789 GO:0000160
Viun9g02036 623 ProSiteProfiles Response regulatory domain profile. 1 94 IPR001789 GO:0000160
Viun9g02036 623 MobiDBLite consensus disorder prediction 576 623 - -
Viun9g02036 623 Pfam CCT motif 553 595 IPR010402 GO:0005515
Viun9g02036 623 MobiDBLite consensus disorder prediction 208 227 - -
Viun9g02036 623 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 151 IPR045279 GO:0009736
Viun9g02036 623 MobiDBLite consensus disorder prediction 100 131 - -
Viun9g02036 623 SUPERFAMILY CheY-like 3 99 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02036 Viun-Chr9 30220733 30225802 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g02036 252 597 Response Regulator Gene Family AT5G24470 25.989 2.02e-12 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Viun9g02036 Response_reg 1.5e-15 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02036 K12130 - gmx:100777119 1045.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02036 9 30220733 30225802 Viun9g02036 9 30220733 30225802 ECH