Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01977 ATGGAGGAGGTTTTTGTTGCCATGAAACTAGTTTTTTCAGTTGCTGTTGTGGGGGTTCTGAGCTGGATACTGTATGTGTATGGAAGTTTGTGGCTTGAGTCTCAAAGGGTGAGGAAGAGGATACAAATGCAAGGAATAAAAGGGCCTCCACCTTCTTTTCTGCATGGAAATCTGTCTGATATGCAGAGAATTCAAGCTCAGGCTAGCCTAGCCAAAGCTTCTATTTCAACCTCCAACGGTTCTGATCAGTATGTGGCTCATGACTGCACTGCAACCCTCTTCCCCTATTTTGAGCACTGGAGGAAACAATATGGTCTACTGTACACTTACTCCACAGGGATGAAACAGCACCTGTATATTAACCAACCGGATCTAGTACGAGAAATGAATCAGTGCATCACTTTGGTTTTGGGTAAGCCTACTTACTTAACAAAAAAACTTGAACCTATGCTTGGCAATGGCATTTTGAGAGCCAATGGTATCAGTTGGTCACAGCAGAGGAAACTTGTTGCAGCTGAATTCTTCATGGACAAAGTTAAGGGTATGGTGGACTTAATGATAGAGTCAGCGCAGCCAATACTATTGAAATGGGAGCAAACTATTGAGAGCCAAGGAGGTGCCACAGCTGAAGTTAAAGTGGATAAAGATCTGAGAGGTTTATCAGCTGATGTTATTTCAAGGGTTTGCTTTGGCCATTCTTATTCCAAGGGAAAGGAAGTCTTCTCCAAGCTTAGAAGCATGCAGAAGGCCATGTTCAAGCATCGTGGCTTCCTTTTTGGCCTCGGCAGTTTTCGTGAGAAACTGAGTTTCAAGTCAAAGAAGCAAAATGAGATAGCGAATTTGGAGAAAGAGATAGAGTCATTGATATGGGAGTTAGTGGAGAAACGCAAGAGGGAATGCTCAGAGGCATCCTCATCAGAGAAGGATTTGATGCAGTTACTGTTGGAAGCAGCCATGAGTGATCAGAGTCTGGGGAAGGACTTTTCCAAACGGTTCATTGTGGATAACTGCAAAAACATTTACTTTGCTGGTCATGAAACCACTGCTGTAGCAGCCTCCTGGTGTTTGATGCTTCTTGGTTTGCACCTAGAATGGCAGACACGTATAAGGGCTGAGGTAGCTGAACATTGCCCCAACGGTATACCAGATTCAGATTCTCTCCCTCTGTTGAAAACGCTGGGTATGGTGATTCAAGAAGTGCTACGTTTATATCCACCAGCAGCCTTTGTGTCAAGGGAGGCATACGAAGATATCCAAATTGGAAACCTGGATGTTCCTAAGGGTGTTTGTTTGTGGACTCTGATCCCAACCCTGCACAGAGATCCTGAAATATGGGGAGCAGATGCTAATGAGTTTAAACCAGAAAGGTTCAGTGAGGGAGTGTCGAAGGCCTGCAAGTATCCACAAGCTTATGTGCCATTTGGGTTGGGTACTCGTTTGTGCTTGGGAAAGAACTTTGCAATGGTTGAATTGAAGGTTGTGCTAGCCCTTATCATCTCCAGGTTTAGCTTCACTCTCTCTCCTAATTATAGGCATTCTCCAGCATATAGAATGATTGTTGAACCAGAATATGGTGTTGATATTATCATTCAGAAGACTTGA 1602 0.4382 MEEVFVAMKLVFSVAVVGVLSWILYVYGSLWLESQRVRKRIQMQGIKGPPPSFLHGNLSDMQRIQAQASLAKASISTSNGSDQYVAHDCTATLFPYFEHWRKQYGLLYTYSTGMKQHLYINQPDLVREMNQCITLVLGKPTYLTKKLEPMLGNGILRANGISWSQQRKLVAAEFFMDKVKGMVDLMIESAQPILLKWEQTIESQGGATAEVKVDKDLRGLSADVISRVCFGHSYSKGKEVFSKLRSMQKAMFKHRGFLFGLGSFREKLSFKSKKQNEIANLEKEIESLIWELVEKRKRECSEASSSEKDLMQLLLEAAMSDQSLGKDFSKRFIVDNCKNIYFAGHETTAVAASWCLMLLGLHLEWQTRIRAEVAEHCPNGIPDSDSLPLLKTLGMVIQEVLRLYPPAAFVSREAYEDIQIGNLDVPKGVCLWTLIPTLHRDPEIWGADANEFKPERFSEGVSKACKYPQAYVPFGLGTRLCLGKNFAMVELKVVLALIISRFSFTLSPNYRHSPAYRMIVEPEYGVDIIIQKT 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01977 533 PRINTS P450 superfamily signature 395 406 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g01977 533 PRINTS P450 superfamily signature 481 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g01977 533 PRINTS P450 superfamily signature 472 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g01977 533 PRINTS P450 superfamily signature 343 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g01977 533 Coils Coil 271 298 - -
Viun9g01977 533 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 474 483 IPR017972 GO:0005506|GO:0016705
Viun9g01977 533 SUPERFAMILY Cytochrome P450 90 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g01977 533 PANTHER CYTOCHROME P450 FAMILY MEMBER 22 525 - -
Viun9g01977 533 Gene3D Cytochrome P450 30 533 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g01977 533 Pfam Cytochrome P450 93 517 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g01977 533 PRINTS E-class P450 group I signature 220 238 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g01977 533 PRINTS E-class P450 group I signature 471 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g01977 533 PRINTS E-class P450 group I signature 481 504 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g01977 533 PRINTS E-class P450 group I signature 101 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g01977 533 PRINTS E-class P450 group I signature 332 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g01977 533 PRINTS E-class P450 group I signature 352 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01977 Viun-Chr9 29708920 29714103 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01977 125 528 Cytochrome P450 AT5G24900 56.968 4.33e-174 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01977 K20661 - gmx:100815776 934.48