Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01975 ATGGAGGAGGTTTTTGTTGCCATGAAACTGGTTTTTTCAGTTGCTGTTGTGGGGGTTCTGAGCTGGATACTCTATGTGTATGGAAGTTTATGGCTTGAGTCTCAAAGGGTGAGAAAGAGGATTCAAATGCAAGGAATAAAAGGGCCTCCACCTTCTTTTCTGTATGGAAATCTGTCTGATATGCAGAGAATTCAAGCTCAGGCTGCTACCCTAGCCAAAGCTTCTATTTCAACCTCCAAAGGTTCTGATCAGTATGTGGCTCATGACTACACTGCAACTCTCTTCCCCTATTTTGAGCACTGGAGGAAACAATATGGTCGACTGTACACTTACTCCACAGGGATGAAGCAGCACCTGTACATTACTCAACCGGACCTAGTAACAGAAATGAATCGGTTTATGAATTTGGTTTTGGGTAAGCCTACTTACTTAACAAAAAAACTTGAACCTATGCTTGGCAATGGCATTATGAGAGCCAATGGTATCAGTTGGTCACAGCAGAGGAAACTTGTTGCAGCTGAATTCTTCATGGACAAAGTTAAGGGTATGGTGGACTTAATTATTGAGTCAACGCAACCATTACTACTGAAATGGGAGCAAACTATTGAGAGTCAAGGAGGTGGCAAAGCTGAAATTAAAGTGGATAAAGATCTGAGAGGTTTATCAGCTGATGTTATTTCAAGGGTTTGCTTTGGCCATTCTTATTCCAAGGGAAAGGAAGTCTTCTCCAAGCTTAGAAGCATGCAGAAGGTCATGTTCAAGCAAAGTGGCTTCATTTTTGGCCTCGGCGGTCTTCGTGAGAAACTGAAATTCTGGTCAAAGAAGAAAGATGAGATAGCGGATTTGGAGAAAGAGATAGAGTCACTGATATGGGATGTAGTGGAGAATCGTAAGAGAGAATGCTCAGAGGCATCCGCATCAGAGAAGGATTTGATGCAGTTACTGTTGGAAGCAGCCACGAATGATCCGAGTCTGGGGAAGGACTTCTCTAAACGGTTCATTGTGGATAACTGCAAAAACATTTACTTTGCTGGTCATGAAACCACTGCTGTATCAGCCTGCTGGTGTTTGATGTTTCTTGGTTTGCACCAAGAGTGGCAGTCTCGTATAAGGGCTGAGGTGGCTGAACATTGCCCCAATGGTATACCAGATTCAGAATCTCTCCCTCTGTTGAAAACGCTGGGTATGGTGATTCAAGAAGTGCTACGTTTATACCCGACAGCAGCCTTTGTGTCAAGGGAAGCATTTGAAGATATCCAAATTGGAAACCTGGATGTTCCTAAGGGTGTTTGTTTGTGGAATCTGATCCCAACCCTGCACAGAGATCCTGAAAATTGGGGAGCAGATGTTAATCAGTTTAAACCAGAAAGGTTCAGTGAGGGAGTGTCCAAGGCCTGCAAGTATCCACAAGCTTATGTGCCATTTGGGTTGGGTCCTCGTATGTGCTTGGGAAAGAACATGGCAATGGTTGAATTGAAGGTTGTGCTAGCCCTGATCATCTCCAGGTTTAGCTTCACTCTGTCTCCTAATTATAGGCATTCTCCAACATTTAGAATGCTTGTGGAACCAGAATATGATGTTGATATTATCATTCAGAAGATTTGA 1605 0.4324 MEEVFVAMKLVFSVAVVGVLSWILYVYGSLWLESQRVRKRIQMQGIKGPPPSFLYGNLSDMQRIQAQAATLAKASISTSKGSDQYVAHDYTATLFPYFEHWRKQYGRLYTYSTGMKQHLYITQPDLVTEMNRFMNLVLGKPTYLTKKLEPMLGNGIMRANGISWSQQRKLVAAEFFMDKVKGMVDLIIESTQPLLLKWEQTIESQGGGKAEIKVDKDLRGLSADVISRVCFGHSYSKGKEVFSKLRSMQKVMFKQSGFIFGLGGLREKLKFWSKKKDEIADLEKEIESLIWDVVENRKRECSEASASEKDLMQLLLEAATNDPSLGKDFSKRFIVDNCKNIYFAGHETTAVSACWCLMFLGLHQEWQSRIRAEVAEHCPNGIPDSESLPLLKTLGMVIQEVLRLYPTAAFVSREAFEDIQIGNLDVPKGVCLWNLIPTLHRDPENWGADVNQFKPERFSEGVSKACKYPQAYVPFGLGPRMCLGKNMAMVELKVVLALIISRFSFTLSPNYRHSPTFRMLVEPEYDVDIIIQKI 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01975 534 PRINTS P450 superfamily signature 482 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g01975 534 PRINTS P450 superfamily signature 396 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g01975 534 PRINTS P450 superfamily signature 344 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g01975 534 PRINTS P450 superfamily signature 473 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g01975 534 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 475 484 IPR017972 GO:0005506|GO:0016705
Viun9g01975 534 Gene3D Cytochrome P450 30 533 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g01975 534 PANTHER CYTOCHROME P450 FAMILY MEMBER 22 525 - -
Viun9g01975 534 SUPERFAMILY Cytochrome P450 90 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g01975 534 PRINTS E-class P450 group I signature 472 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g01975 534 PRINTS E-class P450 group I signature 482 505 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g01975 534 PRINTS E-class P450 group I signature 353 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g01975 534 PRINTS E-class P450 group I signature 102 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g01975 534 PRINTS E-class P450 group I signature 221 239 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g01975 534 PRINTS E-class P450 group I signature 333 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun9g01975 534 Pfam Cytochrome P450 93 518 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01975 Viun-Chr9 29668363 29672993 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01975 126 529 Cytochrome P450 AT5G24900 54.279 1.14e-161 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01975 K20661 - gmx:100815776 863.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01975 9 29668363 29672993 Viun9g01975 9 29668363 29672993 ECH