Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01968 ATGGAGGCACTATTGTGCAGGAAGCTTGGTGATCCAACTGTAAGTTTGGAAGACAACGATAGCCCAATAGTTTTGTCAAAGAATCACCCAATTCCCCAACTCGATTCTCCCACCGCTGTAAGAGTCAGAATCAAAGCCACAAGCTTGAACTTCGCCAATTACTTGCAGATTTTGGGCAAGTATCAAGAGAAGCCCTCTTTGCCCTTCATCCCAGGCTCCGATTTTTCAGGCTACGTTGACGCCGTTGGCCCCAAAGTTTCGAACTTCCGAGTCGGGGACCCCGTTTGTTCCTTCGCCGGACTTGGCACATTCGCTCAGTTCATCGTCGTTGACGAGTCCCAATTGTTTGGGGTGCCCCAAGGGGTCGATCTTGTTGCTGCTGGAGCACTTGCTGTGGCTTTTGGCACTTCTCATGTAGCACTCGTCCACAGGGCCCAATTGACCTCTGGTCAAGTGTTATTGGTTTTGGGTGCAGCTGGAGGTGTGGGCCTTGCTGCTGTGCAAATTGGAAAAGCTTGTGGGGCCATTGTCATTGCTGTGGCTAGGGGAGCTGAAAAGGTGCAACTTTTGAAATCTCTTGGTGTTGATCATGTGGTGGACTTGGGTAATGAAAATGTAACTGAGAGTGTGAAGAAGTTCCTTCAGACTAGAAGACTTAAGGGGGTTGATGTCCTGTATGACCCGGTTGGAGGTAAACTCACTAAAGAATCTTTGCGGCTTCTAAAATGGGGAGCTAACATTCTCATAATTGGGTTTGCAAGTGGTGAAATTCCTGTCATCCCTGTTAACATAGCTCTCGTTAAGAATTGGACAGTGCATGGACTTTACTGGGGTAGCTATAAAATACACCGGCCAGGTGTTCTTGAAGATTCTGTGAAGGAGCTACTGTCTTGGTTGGCAAGAGGCTTGATTTCCATCCATATTTCTCACTCATACCCCCCGTCAGAGGGATTTTACTACTGTTGTAACCGAAGGAAGTATTTTTTTTTTTAA 993 0.4713 MEALLCRKLGDPTVSLEDNDSPIVLSKNHPIPQLDSPTAVRVRIKATSLNFANYLQILGKYQEKPSLPFIPGSDFSGYVDAVGPKVSNFRVGDPVCSFAGLGTFAQFIVVDESQLFGVPQGVDLVAAGALAVAFGTSHVALVHRAQLTSGQVLLVLGAAGGVGLAAVQIGKACGAIVIAVARGAEKVQLLKSLGVDHVVDLGNENVTESVKKFLQTRRLKGVDVLYDPVGGKLTKESLRLLKWGANILIIGFASGEIPVIPVNIALVKNWTVHGLYWGSYKIHRPGVLEDSVKELLSWLARGLISIHISHSYPPSEGFYYCCNRRKYFFF 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01968 330 CDD QOR1 1 313 - -
Viun9g01968 330 Gene3D - 133 280 - -
Viun9g01968 330 SMART PKS_ER_names_mod 17 304 IPR020843 GO:0016491
Viun9g01968 330 Pfam Alcohol dehydrogenase GroES-like domain 38 97 IPR013154 -
Viun9g01968 330 Gene3D - 34 315 - -
Viun9g01968 330 SUPERFAMILY GroES-like 29 148 IPR011032 -
Viun9g01968 330 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 150 171 IPR002364 GO:0008270|GO:0016491
Viun9g01968 330 Pfam Zinc-binding dehydrogenase 161 300 IPR013149 -
Viun9g01968 330 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 121 285 IPR036291 -
Viun9g01968 330 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE 1 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01968 Viun-Chr9 29638704 29645559 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01968 68 266 Monolignol Biosynthesis Gene Families AT1G72680 25.424 4.59e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01968 K00344 - gmx:100817700 568.155