Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun9g01962 | ATGGAGTCGTCGCCGTCGTCTTCGTCTTCGTCCTCGTTGTCGTCGTCTTCTGGAAGCGATGCCGGCGGTGGGGGCGCTGTCACGTGGTTCGGGATGAGTTTCCCGTTCCGTTCTCCGCTCTCTCTCGTGATGGATTACTGCACGCGCGAGGATTCCGCAGAGCCTGTGATTATCATTCCCCGGACGCGCCCGCGGTTTCAGGCGCCGGCTGAATCTGCTGCTTCTGCTTCGGCCTCTGACTCTGGCGATAATGCTTGCGGCGGCGCTGAGGAGGTTGCGATACGCATCATTGGGGCCGGCGAGCAAGAGAGCGGTTCGTCGCCGTCGTCGTCGCGGAGCCGCGCTGGGGAACCTGGATGTGAGGAGGCGGCGGTAGTTGGGAGGAGCGGGATGCTGTCGTCGGAAGCTCGCCGGCGAATGGCTGAGGAGAGGGTGCCGTTGGTGTCTTTGGATGATGGTATTGGTGGCGGTAGGGATTCTTCTTCGTCTTCCTCTACCTACCAGAGGTATGATATTCAGCAGGTTGCTAAGTGGATTGAACAGATTCTTCCGTTCTCCCTCTTGCTGTTGATTGTTTTCATCCGCCAGCATTTGCAAGGTTTCTTTGTCACAATTTGTATATCAGCTGTGATGTTCAAGTCAAATGAAATTGTTAAGAAGCAGACTGCCCTGAAGGGAGATCGGAAAGTCTCTGTTCTTCTTGGTATCTCTTTTGCCTTTATGCTGCATGTTATATGCATTTACTGGTGGTATCGAAATGATGATCTTTTATACCCACTGGCCATGCTTCCACCAAAGACAACTCCACCTTTCTGGCATACAATATTCATCATTTTGGTTAACGATACATTGGTGCGGCAAGCAGCAATGGCTTTGAAGTGTTTATTGCTCATTTACTACAAAAATGGAAGAGGCCATAACTTTCGTCGGCAGGGTCAAATGTTAACTCTGATTGAGTACACTCTTCTGCTGTATCGTGCCTTGTTGCCAACACCAGTTTGGTACCGATTTTTCTTGAACAAAGATTATGGAAGTCTGTTTTCCTCACTGACCACAGGATTGTATTTAACTTTCAAGCTAACATCAGTAGTTGAGAAGGTCCAATGCTTTGTTTCTGCCTTAAAAGCATTATCGAAAAAGGAAGTTCATTACGGGGTTTATGCTACAACAGAACAGGTGAGTGCCGCTGGTGACATGTGTGCTATATGTCAGGAGAAGATGCAGGCTCCCATATTGTTGAGCTGTAAACACATGTTCTGTGAGGAGTGTGTATCTGAATGGTTTGAGAGAGAACGGACTTGCCCATTATGCAGGGCTTTGGTAAAACCAGCTGATCTTCGGACTTTCGGAGATGGATCAACAAGTCTGTTTTTTCAGCTGTTTTAA | 1386 | 0.4892 | MESSPSSSSSSSLSSSSGSDAGGGGAVTWFGMSFPFRSPLSLVMDYCTREDSAEPVIIIPRTRPRFQAPAESAASASASDSGDNACGGAEEVAIRIIGAGEQESGSSPSSSRSRAGEPGCEEAAVVGRSGMLSSEARRRMAEERVPLVSLDDGIGGGRDSSSSSSTYQRYDIQQVAKWIEQILPFSLLLLIVFIRQHLQGFFVTICISAVMFKSNEIVKKQTALKGDRKVSVLLGISFAFMLHVICIYWWYRNDDLLYPLAMLPPKTTPPFWHTIFIILVNDTLVRQAAMALKCLLLIYYKNGRGHNFRRQGQMLTLIEYTLLLYRALLPTPVWYRFFLNKDYGSLFSSLTTGLYLTFKLTSVVEKVQCFVSALKALSKKEVHYGVYATTEQVSAAGDMCAICQEKMQAPILLSCKHMFCEECVSEWFERERTCPLCRALVKPADLRTFGDGSTSLFFQLF | 461 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun9g01962 | 461 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 375 | 448 | IPR013083 | - | |
Viun9g01962 | 461 | PANTHER | UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN | 71 | 461 | IPR044235 | GO:0061630|GO:1904294 | |
Viun9g01962 | 461 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Viun9g01962 | 461 | Pfam | Zinc finger, C3HC4 type (RING finger) | 398 | 441 | - | - | |
Viun9g01962 | 461 | ProSiteProfiles | Zinc finger RING-type profile. | 400 | 438 | IPR001841 | - | |
Viun9g01962 | 461 | SMART | ring_2 | 400 | 437 | IPR001841 | - | |
Viun9g01962 | 461 | CDD | RING-HC_RNFT1-like | 398 | 438 | - | - | |
Viun9g01962 | 461 | ProSitePatterns | Zinc finger RING-type signature. | 415 | 424 | IPR017907 | - | |
Viun9g01962 | 461 | MobiDBLite | consensus disorder prediction | 99 | 121 | - | - | |
Viun9g01962 | 461 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Viun9g01962 | 461 | SUPERFAMILY | RING/U-box | 390 | 443 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun9g01962 | Viun-Chr9 | 29485806 | 29493604 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun9g01962 | 61 | 461 | C3H Transcription Factor Family | AT5G01960 | 67.082 | 0.0 | 555 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun9g01962 | - | K22379 | gmx:100784614 | 764.992 |